RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 JMJD7-PLA2G4BH0Y9G9 81 aa8.91□□□□□ -0.98
LTBR-210ENST00000542830 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
LTBR-210ENST00000542830 LYRM7Q5U5X0 104 aa8.89□□□□□ -0.99
LTBR-210ENST00000542830 Q6ZQT0 140 aa8.89□□□□□ -0.99
LTBR-210ENST00000542830 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
LTBR-210ENST00000542830 A0A1B0GW54 56 aa8.88□□□□□ -0.99
LTBR-210ENST00000542830 PDE6GP18545 87 aa8.87□□□□□ -0.99
LTBR-210ENST00000542830 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
LTBR-210ENST00000542830 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
LTBR-210ENST00000542830 NDUFB1O75438 58 aa8.85□□□□□ -0.99
LTBR-210ENST00000542830 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
LTBR-210ENST00000542830 FAM236DA0A1B0GTK5 79 aa8.83□□□□□ -1
LTBR-210ENST00000542830 FAM236CP0DP71 79 aa8.83□□□□□ -1
LTBR-210ENST00000542830 RBM12B-AS1Q9P1G2 102 aa8.82□□□□□ -1
LTBR-210ENST00000542830 HRES1P13985 223 aa8.79□□□□□ -1
LTBR-210ENST00000542830 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
LTBR-210ENST00000542830 A8MWP4 228 aa8.78□□□□□ -1
LTBR-210ENST00000542830 BATFQ16520 125 aa8.78□□□□□ -1
LTBR-210ENST00000542830 ZCCHC13Q8WW36 166 aaKnown RBP8.78□□□□□ -1
LTBR-210ENST00000542830 C14orf132Q9NPU4 83 aa8.78□□□□□ -1
LTBR-210ENST00000542830 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
LTBR-210ENST00000542830 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
LTBR-210ENST00000542830 NREPQ16612 68 aa8.73□□□□□ -1.01
LTBR-210ENST00000542830 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
LTBR-210ENST00000542830 MTURNQ8N3F0 131 aa8.72□□□□□ -1.01
LTBR-210ENST00000542830 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
LTBR-210ENST00000542830 C9orf118A6NHY6 69 aa8.71□□□□□ -1.02
LTBR-210ENST00000542830 H3BT86 120 aa8.71□□□□□ -1.02
LTBR-210ENST00000542830 SPINK7P58062 85 aa8.7□□□□□ -1.02
LTBR-210ENST00000542830 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
LTBR-210ENST00000542830 Q6ZVQ6 151 aa8.68□□□□□ -1.02
LTBR-210ENST00000542830 A0A1W2PPM0 123 aa8.67□□□□□ -1.02
LTBR-210ENST00000542830 TAX1BP3O14907 124 aa8.67□□□□□ -1.02
LTBR-210ENST00000542830 LOC105371267A0A1B0GV96 52 aa8.66□□□□□ -1.02
LTBR-210ENST00000542830 TMEM254Q8TBM7 123 aa8.62□□□□□ -1.03
LTBR-210ENST00000542830 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
LTBR-210ENST00000542830 MRPL34Q9BQ48 92 aaKnown RBP8.61□□□□□ -1.03
LTBR-210ENST00000542830 MT2AP02795 61 aa8.59□□□□□ -1.03
LTBR-210ENST00000542830 hDV103S1A0JD37 113 aa8.57□□□□□ -1.04
LTBR-210ENST00000542830 K7EQZ3 153 aa8.57□□□□□ -1.04
LTBR-210ENST00000542830 WFDC13Q8IUB5 93 aa8.57□□□□□ -1.04
LTBR-210ENST00000542830 BPY2O14599 106 aa8.56□□□□□ -1.04
LTBR-210ENST00000542830 SPCS1Q9Y6A9 102 aa8.55□□□□□ -1.04
LTBR-210ENST00000542830 NDUFS5O43920 106 aa8.53□□□□□ -1.04
LTBR-210ENST00000542830 MT1FP04733 61 aa8.52□□□□□ -1.05
LTBR-210ENST00000542830 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
LTBR-210ENST00000542830 USH2AO75445 5202 aa8.48□□□□□ -1.05
LTBR-210ENST00000542830 COL5A1-AS1Q5SY13 56 aa8.47□□□□□ -1.05
LTBR-210ENST00000542830 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
LTBR-210ENST00000542830 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
LTBR-210ENST00000542830 CASC2Q6XLA1 102 aa8.43□□□□□ -1.06
LTBR-210ENST00000542830 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
LTBR-210ENST00000542830 Q8N9L7 120 aa8.42□□□□□ -1.06
LTBR-210ENST00000542830 UBL5Q9BZL1 73 aa8.41□□□□□ -1.06
LTBR-210ENST00000542830 IGKV2D-30A0A075B6S6 120 aa8.4□□□□□ -1.06
LTBR-210ENST00000542830 K7EP34 96 aa8.4□□□□□ -1.06
LTBR-210ENST00000542830 IGKV2-30P06310 120 aa8.4□□□□□ -1.06
LTBR-210ENST00000542830 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
LTBR-210ENST00000542830 PRO0461Q9UI25 63 aa8.4□□□□□ -1.06
LTBR-210ENST00000542830 HCG22E2RYF7 251 aa8.39□□□□□ -1.07
LTBR-210ENST00000542830 LCE2BO14633 110 aa8.39□□□□□ -1.07
LTBR-210ENST00000542830 Q5W150 140 aa8.39□□□□□ -1.07
LTBR-210ENST00000542830 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
LTBR-210ENST00000542830 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
LTBR-210ENST00000542830 CXCL6P80162 114 aa8.37□□□□□ -1.07
LTBR-210ENST00000542830 GTF2H5Q6ZYL4 71 aa8.32□□□□□ -1.08
LTBR-210ENST00000542830 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
LTBR-210ENST00000542830 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
LTBR-210ENST00000542830 F8W1H4 67 aa8.26□□□□□ -1.09
LTBR-210ENST00000542830 C4orf26Q17RF5 130 aa8.25□□□□□ -1.09
LTBR-210ENST00000542830 FCGBPQ9Y6R7 5405 aaPredicted RBP8.22□□□□□ -1.09
LTBR-210ENST00000542830 ETDBQ3ZM63 59 aa8.21□□□□□ -1.1
LTBR-210ENST00000542830 TP53AIP1Q9HCN2 124 aa8.21□□□□□ -1.1
LTBR-210ENST00000542830 KRTAP9-7A8MTY7 169 aa8.19□□□□□ -1.1
LTBR-210ENST00000542830 PCP4L1A6NKN8 68 aa8.18□□□□□ -1.1
LTBR-210ENST00000542830 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
LTBR-210ENST00000542830 C1orf64Q8NEQ6 169 aa8.11□□□□□ -1.11
LTBR-210ENST00000542830 C5orf47Q569G3 176 aa8.1□□□□□ -1.11
LTBR-210ENST00000542830 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
LTBR-210ENST00000542830 S4R3F8 94 aa8.1□□□□□ -1.11
LTBR-210ENST00000542830 ACYP1P07311 99 aa8.08□□□□□ -1.12
LTBR-210ENST00000542830 CSAG1Q6PB30 78 aa8.05□□□□□ -1.12
LTBR-210ENST00000542830 FAM236AA0A1B0GUQ0 79 aa8.03□□□□□ -1.12
LTBR-210ENST00000542830 FAM236BA0A1B0GV22 79 aa8.03□□□□□ -1.12
LTBR-210ENST00000542830 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
LTBR-210ENST00000542830 ATP5EP2Q5VTU8 51 aa8.03□□□□□ -1.12
LTBR-210ENST00000542830 LCA10Q71F78 164 aa8.02□□□□□ -1.13
LTBR-210ENST00000542830 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
LTBR-210ENST00000542830 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
LTBR-210ENST00000542830 LOC101927531A0A1B0GV80 90 aa7.98□□□□□ -1.13
LTBR-210ENST00000542830 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
LTBR-210ENST00000542830 MACF1Q9UPN3 7388 aaKnown RBP7.92□□□□□ -1.14
LTBR-210ENST00000542830 UQCRQO14949 82 aa7.92□□□□□ -1.14
LTBR-210ENST00000542830 ATOX1O00244 68 aa7.9□□□□□ -1.14
LTBR-210ENST00000542830 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
LTBR-210ENST00000542830 SPRR2GQ9BYE4 73 aa7.88□□□□□ -1.15
LTBR-210ENST00000542830 H0Y9P7 68 aa7.87□□□□□ -1.15
LTBR-210ENST00000542830 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
LTBR-210ENST00000542830 Q5VV11 94 aa7.86□□□□□ -1.15
LTBR-210ENST00000542830 LINC00643Q86TS7 51 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms