RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 A8MWP4 228 aa12.73□□□□□ -0.37
HOMER3-205ENST00000542541 A0A1B0GVX0 72 aa12.7□□□□□ -0.38
HOMER3-205ENST00000542541 IGHV6-1A0A0B4J1U7 121 aa12.7□□□□□ -0.38
HOMER3-205ENST00000542541 DSCR10P59022 87 aa12.68□□□□□ -0.38
HOMER3-205ENST00000542541 LINC00313P59037 77 aa12.67□□□□□ -0.38
HOMER3-205ENST00000542541 IGKV3D-7A0A0C4DH55 119 aa12.66□□□□□ -0.38
HOMER3-205ENST00000542541 C8orf87E5RJ46 101 aa12.65□□□□□ -0.38
HOMER3-205ENST00000542541 PRR15Q8IV56 129 aa12.65□□□□□ -0.38
HOMER3-205ENST00000542541 K7ERU9 68 aa12.64□□□□□ -0.39
HOMER3-205ENST00000542541 CXCL6P80162 114 aa12.62□□□□□ -0.39
HOMER3-205ENST00000542541 XP32Q5T750 250 aa12.62□□□□□ -0.39
HOMER3-205ENST00000542541 K7EQZ3 153 aa12.6□□□□□ -0.39
HOMER3-205ENST00000542541 ATP5EP2Q5VTU8 51 aa12.58□□□□□ -0.4
HOMER3-205ENST00000542541 LINC00643Q86TS7 51 aa12.58□□□□□ -0.4
HOMER3-205ENST00000542541 UBR4Q5T4S7 5183 aa12.57□□□□□ -0.4
HOMER3-205ENST00000542541 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
HOMER3-205ENST00000542541 C8orf17Q9NRJ1 99 aa12.56□□□□□ -0.4
HOMER3-205ENST00000542541 Q8N9L7 120 aa12.55□□□□□ -0.4
HOMER3-205ENST00000542541 KRTAP16-1A8MUX0 517 aa12.5□□□□□ -0.41
HOMER3-205ENST00000542541 Q75L30 129 aa12.48□□□□□ -0.41
HOMER3-205ENST00000542541 MMP24-AS1A0A0U1RRL7 71 aa12.48□□□□□ -0.41
HOMER3-205ENST00000542541 C20orf166-AS1Q96NR2 134 aa12.48□□□□□ -0.41
HOMER3-205ENST00000542541 RPL37P61927 97 aaKnown RBP12.47□□□□□ -0.41
HOMER3-205ENST00000542541 SEC61BP60468 96 aaKnown RBP12.46□□□□□ -0.41
HOMER3-205ENST00000542541 hDV103S1A0JD37 113 aa12.45□□□□□ -0.42
HOMER3-205ENST00000542541 A8MUU9 505 aa12.45□□□□□ -0.42
HOMER3-205ENST00000542541 TMEM254Q8TBM7 123 aa12.44□□□□□ -0.42
HOMER3-205ENST00000542541 CASC2Q6XLA1 102 aa12.41□□□□□ -0.42
HOMER3-205ENST00000542541 HCG22E2RYF7 251 aa12.4□□□□□ -0.42
HOMER3-205ENST00000542541 HIST1H4AP62805 103 aaKnown RBP12.4□□□□□ -0.42
HOMER3-205ENST00000542541 MRPL34Q9BQ48 92 aaKnown RBP12.4□□□□□ -0.42
HOMER3-205ENST00000542541 WFDC13Q8IUB5 93 aa12.4□□□□□ -0.42
HOMER3-205ENST00000542541 ATP11AUNQ6ZP68 121 aa12.39□□□□□ -0.43
HOMER3-205ENST00000542541 Q8N9P0 234 aaPredicted RBP12.39□□□□□ -0.43
HOMER3-205ENST00000542541 PCOTHQ58A44 107 aa12.34□□□□□ -0.43
HOMER3-205ENST00000542541 MUC17Q685J3 4493 aa12.32□□□□□ -0.44
HOMER3-205ENST00000542541 NDUFS5O43920 106 aa12.3□□□□□ -0.44
HOMER3-205ENST00000542541 RNF213Q63HN8 5207 aa12.29□□□□□ -0.44
HOMER3-205ENST00000542541 A0A087WVE0 104 aa12.25□□□□□ -0.45
HOMER3-205ENST00000542541 IMUPQ9GZP8 106 aa12.25□□□□□ -0.45
HOMER3-205ENST00000542541 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
HOMER3-205ENST00000542541 ZCCHC13Q8WW36 166 aaKnown RBP12.23□□□□□ -0.45
HOMER3-205ENST00000542541 TP53AIP1Q9HCN2 124 aa12.17□□□□□ -0.46
HOMER3-205ENST00000542541 MUC2Q02817 5179 aa12.14□□□□□ -0.47
HOMER3-205ENST00000542541 KRTAP4-1Q9BYQ7 146 aa12.1□□□□□ -0.47
HOMER3-205ENST00000542541 Q5W150 140 aa12.06□□□□□ -0.48
HOMER3-205ENST00000542541 SCGB1A1P11684 91 aa12.05□□□□□ -0.48
HOMER3-205ENST00000542541 UQCRQO14949 82 aa12.01□□□□□ -0.49
HOMER3-205ENST00000542541 SPINK7P58062 85 aa11.99□□□□□ -0.49
HOMER3-205ENST00000542541 FAM236AA0A1B0GUQ0 79 aa11.97□□□□□ -0.49
HOMER3-205ENST00000542541 FAM236BA0A1B0GV22 79 aa11.97□□□□□ -0.49
HOMER3-205ENST00000542541 OCR1Q9BZK8 76 aa11.96□□□□□ -0.5
HOMER3-205ENST00000542541 TRAV22A0A0B4J277 110 aa11.95□□□□□ -0.5
HOMER3-205ENST00000542541 IGKV2D-30A0A075B6S6 120 aa11.91□□□□□ -0.5
HOMER3-205ENST00000542541 IGKV2-30P06310 120 aa11.91□□□□□ -0.5
HOMER3-205ENST00000542541 C7orf65Q6ZTY9 151 aa11.91□□□□□ -0.5
HOMER3-205ENST00000542541 A0A0U1RQV1 116 aa11.89□□□□□ -0.51
HOMER3-205ENST00000542541 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
HOMER3-205ENST00000542541 ATOX1O00244 68 aa11.89□□□□□ -0.51
HOMER3-205ENST00000542541 H0Y9P7 68 aa11.86□□□□□ -0.51
HOMER3-205ENST00000542541 C5orf47Q569G3 176 aa11.86□□□□□ -0.51
HOMER3-205ENST00000542541 HRES1P13985 223 aa11.83□□□□□ -0.52
HOMER3-205ENST00000542541 MP68P56378 58 aa11.83□□□□□ -0.52
HOMER3-205ENST00000542541 LOC101927531A0A1B0GV80 90 aa11.82□□□□□ -0.52
HOMER3-205ENST00000542541 TRAV7A0A075B6U4 112 aa11.8□□□□□ -0.52
HOMER3-205ENST00000542541 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
HOMER3-205ENST00000542541 FAT4Q6V0I7 4981 aa11.77□□□□□ -0.53
HOMER3-205ENST00000542541 MPLKIPQ8TAP9 179 aa11.76□□□□□ -0.53
HOMER3-205ENST00000542541 CYP4F30PQ9H0H9 118 aa11.76□□□□□ -0.53
HOMER3-205ENST00000542541 H3BPC8 53 aa11.75□□□□□ -0.53
HOMER3-205ENST00000542541 COX6B2Q6YFQ2 88 aa11.75□□□□□ -0.53
HOMER3-205ENST00000542541 C1orf64Q8NEQ6 169 aa11.75□□□□□ -0.53
HOMER3-205ENST00000542541 LINC00208Q96KT6 92 aa11.75□□□□□ -0.53
HOMER3-205ENST00000542541 KRTAP19-2Q3LHN2 52 aa11.72□□□□□ -0.53
HOMER3-205ENST00000542541 FAM236DA0A1B0GTK5 79 aa11.7□□□□□ -0.54
HOMER3-205ENST00000542541 FAM236CP0DP71 79 aa11.7□□□□□ -0.54
HOMER3-205ENST00000542541 SERP2Q8N6R1 65 aa11.68□□□□□ -0.54
HOMER3-205ENST00000542541 LCE2CQ5TA81 110 aa11.65□□□□□ -0.54
HOMER3-205ENST00000542541 C4orf26Q17RF5 130 aa11.63□□□□□ -0.55
HOMER3-205ENST00000542541 LCE2AQ5TA79 106 aaPredicted RBP11.55□□□□□ -0.56
HOMER3-205ENST00000542541 KLKP1Q107X0 134 aa11.53□□□□□ -0.56
HOMER3-205ENST00000542541 COX7CP15954 63 aa11.51□□□□□ -0.57
HOMER3-205ENST00000542541 ANAPC13Q9BS18 74 aa11.5□□□□□ -0.57
HOMER3-205ENST00000542541 C20orf197Q8N268 126 aa11.49□□□□□ -0.57
HOMER3-205ENST00000542541 H1FX-AS1Q4G0G2 97 aa11.49□□□□□ -0.57
HOMER3-205ENST00000542541 MT1HP80294 61 aa11.48□□□□□ -0.57
HOMER3-205ENST00000542541 SNURFQ9Y675 71 aa11.47□□□□□ -0.57
HOMER3-205ENST00000542541 KRTAP3-1Q9BYR8 98 aa11.42□□□□□ -0.58
HOMER3-205ENST00000542541 FLGP20930 4061 aaPredicted RBP11.41□□□□□ -0.58
HOMER3-205ENST00000542541 M0R2T5 61 aa11.4□□□□□ -0.58
HOMER3-205ENST00000542541 A8MUN3 132 aa11.37□□□□□ -0.59
HOMER3-205ENST00000542541 PCP4P48539 62 aa11.34□□□□□ -0.59
HOMER3-205ENST00000542541 NDUFC1O43677 76 aa11.27□□□□□ -0.6
HOMER3-205ENST00000542541 DMAC1Q96GE9 116 aa11.26□□□□□ -0.61
HOMER3-205ENST00000542541 S4R3F8 94 aa11.26□□□□□ -0.61
HOMER3-205ENST00000542541 SPANXA2-OT1Q8N9U9 137 aa11.24□□□□□ -0.61
HOMER3-205ENST00000542541 CCDC179H3BU77 68 aa11.2□□□□□ -0.62
HOMER3-205ENST00000542541 LCA10Q71F78 164 aa11.17□□□□□ -0.62
HOMER3-205ENST00000542541 ACYP2P14621 99 aa11.16□□□□□ -0.62
HOMER3-205ENST00000542541 KRTAP10-6P60371 365 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms