RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 VPS25Q9BRG1 176 aa7.83□□□□□ -1.16
VPS33A-206ENST00000542310 J3KT08 172 aa7.82□□□□□ -1.16
VPS33A-206ENST00000542310 C9JAW5 83 aa7.79□□□□□ -1.16
VPS33A-206ENST00000542310 MT2AP02795 61 aa7.77□□□□□ -1.17
VPS33A-206ENST00000542310 BAALC-AS2P0C853 105 aa7.77□□□□□ -1.17
VPS33A-206ENST00000542310 Q6ZQT0 140 aa7.76□□□□□ -1.17
VPS33A-206ENST00000542310 ZCCHC13Q8WW36 166 aaKnown RBP7.76□□□□□ -1.17
VPS33A-206ENST00000542310 A0A1B0GW54 56 aa7.75□□□□□ -1.17
VPS33A-206ENST00000542310 MTURNQ8N3F0 131 aa7.75□□□□□ -1.17
VPS33A-206ENST00000542310 TMA7Q9Y2S6 64 aaKnown RBP7.75□□□□□ -1.17
VPS33A-206ENST00000542310 USH2AO75445 5202 aa7.74□□□□□ -1.17
VPS33A-206ENST00000542310 JMJD7-PLA2G4BH0Y9G9 81 aa7.73□□□□□ -1.17
VPS33A-206ENST00000542310 NDUFB1O75438 58 aa7.73□□□□□ -1.17
VPS33A-206ENST00000542310 ATXN8Q156A1 80 aa7.73□□□□□ -1.17
VPS33A-206ENST00000542310 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
VPS33A-206ENST00000542310 M0R143 59 aa7.72□□□□□ -1.17
VPS33A-206ENST00000542310 LOC110117498A0A087WWA1 95 aa7.71□□□□□ -1.18
VPS33A-206ENST00000542310 A8MWP4 228 aa7.7□□□□□ -1.18
VPS33A-206ENST00000542310 MT1FP04733 61 aa7.7□□□□□ -1.18
VPS33A-206ENST00000542310 PDE6GP18545 87 aa7.7□□□□□ -1.18
VPS33A-206ENST00000542310 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
VPS33A-206ENST00000542310 SPINK7P58062 85 aa7.69□□□□□ -1.18
VPS33A-206ENST00000542310 C8orf17Q9NRJ1 99 aa7.68□□□□□ -1.18
VPS33A-206ENST00000542310 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
VPS33A-206ENST00000542310 LYRM7Q5U5X0 104 aa7.65□□□□□ -1.18
VPS33A-206ENST00000542310 KRTAP9-3Q9BYQ3 159 aa7.65□□□□□ -1.18
VPS33A-206ENST00000542310 IGKV3D-7A0A0C4DH55 119 aa7.64□□□□□ -1.19
VPS33A-206ENST00000542310 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
VPS33A-206ENST00000542310 NAA38Q9BRA0 125 aaKnown RBP7.63□□□□□ -1.19
VPS33A-206ENST00000542310 LCE2BO14633 110 aa7.62□□□□□ -1.19
VPS33A-206ENST00000542310 Q6ZVQ6 151 aa7.62□□□□□ -1.19
VPS33A-206ENST00000542310 C14orf132Q9NPU4 83 aa7.62□□□□□ -1.19
VPS33A-206ENST00000542310 WFDC13Q8IUB5 93 aa7.6□□□□□ -1.19
VPS33A-206ENST00000542310 PRR15Q8IV56 129 aa7.6□□□□□ -1.19
VPS33A-206ENST00000542310 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
VPS33A-206ENST00000542310 SMIM6P0DI80 62 aa7.59□□□□□ -1.19
VPS33A-206ENST00000542310 NREPQ16612 68 aa7.57□□□□□ -1.2
VPS33A-206ENST00000542310 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
VPS33A-206ENST00000542310 MMP24-AS1A0A0U1RRL7 71 aa7.56□□□□□ -1.2
VPS33A-206ENST00000542310 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
VPS33A-206ENST00000542310 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
VPS33A-206ENST00000542310 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
VPS33A-206ENST00000542310 H3BT86 120 aa7.52□□□□□ -1.21
VPS33A-206ENST00000542310 hDV103S1A0JD37 113 aa7.5□□□□□ -1.21
VPS33A-206ENST00000542310 TSTD3H0UI37 97 aa7.5□□□□□ -1.21
VPS33A-206ENST00000542310 K7EQZ3 153 aa7.49□□□□□ -1.21
VPS33A-206ENST00000542310 LINC00846Q9NV44 126 aa7.47□□□□□ -1.21
VPS33A-206ENST00000542310 BATFQ16520 125 aa7.46□□□□□ -1.22
VPS33A-206ENST00000542310 C9orf118A6NHY6 69 aa7.45□□□□□ -1.22
VPS33A-206ENST00000542310 NDUFS5O43920 106 aa7.45□□□□□ -1.22
VPS33A-206ENST00000542310 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
VPS33A-206ENST00000542310 BPY2O14599 106 aa7.44□□□□□ -1.22
VPS33A-206ENST00000542310 A0A1W2PPM0 123 aa7.43□□□□□ -1.22
VPS33A-206ENST00000542310 KRTAP19-6Q3LI70 58 aa7.43□□□□□ -1.22
VPS33A-206ENST00000542310 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
VPS33A-206ENST00000542310 TAX1BP3O14907 124 aa7.4□□□□□ -1.22
VPS33A-206ENST00000542310 IGKV2D-30A0A075B6S6 120 aa7.38□□□□□ -1.23
VPS33A-206ENST00000542310 IGKV2-30P06310 120 aa7.38□□□□□ -1.23
VPS33A-206ENST00000542310 Q5W150 140 aa7.36□□□□□ -1.23
VPS33A-206ENST00000542310 CASC2Q6XLA1 102 aa7.35□□□□□ -1.23
VPS33A-206ENST00000542310 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
VPS33A-206ENST00000542310 CXCL6P80162 114 aa7.32□□□□□ -1.24
VPS33A-206ENST00000542310 Q8N9L7 120 aa7.32□□□□□ -1.24
VPS33A-206ENST00000542310 MACF1Q9UPN3 7388 aaKnown RBP7.32□□□□□ -1.24
VPS33A-206ENST00000542310 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
VPS33A-206ENST00000542310 LOC105371267A0A1B0GV96 52 aa7.26□□□□□ -1.25
VPS33A-206ENST00000542310 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
VPS33A-206ENST00000542310 UBL5Q9BZL1 73 aa7.26□□□□□ -1.25
VPS33A-206ENST00000542310 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
VPS33A-206ENST00000542310 SYNE2Q8WXH0 6885 aaKnown RBP7.22□□□□□ -1.25
VPS33A-206ENST00000542310 PRO0461Q9UI25 63 aa7.21□□□□□ -1.26
VPS33A-206ENST00000542310 COL5A1-AS1Q5SY13 56 aa7.18□□□□□ -1.26
VPS33A-206ENST00000542310 K7EP34 96 aa7.17□□□□□ -1.26
VPS33A-206ENST00000542310 S4R3F8 94 aa7.17□□□□□ -1.26
VPS33A-206ENST00000542310 C5orf47Q569G3 176 aa7.16□□□□□ -1.26
VPS33A-206ENST00000542310 TP53AIP1Q9HCN2 124 aa7.15□□□□□ -1.26
VPS33A-206ENST00000542310 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
VPS33A-206ENST00000542310 FAM236AA0A1B0GUQ0 79 aa7.13□□□□□ -1.27
VPS33A-206ENST00000542310 FAM236BA0A1B0GV22 79 aa7.13□□□□□ -1.27
VPS33A-206ENST00000542310 KRTAP6-3Q3LI67 103 aa7.13□□□□□ -1.27
VPS33A-206ENST00000542310 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
VPS33A-206ENST00000542310 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
VPS33A-206ENST00000542310 LCA10Q71F78 164 aa7.1□□□□□ -1.27
VPS33A-206ENST00000542310 GTF2H5Q6ZYL4 71 aa7.07□□□□□ -1.28
VPS33A-206ENST00000542310 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
VPS33A-206ENST00000542310 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
VPS33A-206ENST00000542310 Q5VV11 94 aa7.05□□□□□ -1.28
VPS33A-206ENST00000542310 F8W1H4 67 aa7.04□□□□□ -1.28
VPS33A-206ENST00000542310 MT1BP07438 61 aa7.04□□□□□ -1.28
VPS33A-206ENST00000542310 A6NN06 94 aa7.02□□□□□ -1.29
VPS33A-206ENST00000542310 KLKP1Q107X0 134 aa7.01□□□□□ -1.29
VPS33A-206ENST00000542310 ETDBQ3ZM63 59 aa7□□□□□ -1.29
VPS33A-206ENST00000542310 CYP4F30PQ9H0H9 118 aa6.99□□□□□ -1.29
VPS33A-206ENST00000542310 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
VPS33A-206ENST00000542310 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
VPS33A-206ENST00000542310 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
VPS33A-206ENST00000542310 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
VPS33A-206ENST00000542310 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
VPS33A-206ENST00000542310 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
VPS33A-206ENST00000542310 ACYP1P07311 99 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms