RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 H7BZZ5 65 aa9.92□□□□□ -0.82
TMEM50B-210ENST00000542230 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
TMEM50B-210ENST00000542230 PKHD1L1Q86WI1 4243 aa9.91□□□□□ -0.82
TMEM50B-210ENST00000542230 A0A0U1RQV1 116 aa9.9□□□□□ -0.82
TMEM50B-210ENST00000542230 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
TMEM50B-210ENST00000542230 C1orf195Q5TG92 126 aa9.89□□□□□ -0.83
TMEM50B-210ENST00000542230 ASB16-AS1Q495Z4 193 aa9.87□□□□□ -0.83
TMEM50B-210ENST00000542230 KRTAP17-1Q9BYP8 105 aa9.87□□□□□ -0.83
TMEM50B-210ENST00000542230 TMEM258P61165 79 aa9.83□□□□□ -0.84
TMEM50B-210ENST00000542230 Q5XG85 94 aa9.82□□□□□ -0.84
TMEM50B-210ENST00000542230 SVIPQ8NHG7 77 aa9.82□□□□□ -0.84
TMEM50B-210ENST00000542230 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
TMEM50B-210ENST00000542230 FLG2Q5D862 2391 aaPredicted RBP9.81□□□□□ -0.84
TMEM50B-210ENST00000542230 C5orf47Q569G3 176 aa9.8□□□□□ -0.84
TMEM50B-210ENST00000542230 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
TMEM50B-210ENST00000542230 NDUFS5O43920 106 aa9.79□□□□□ -0.84
TMEM50B-210ENST00000542230 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
TMEM50B-210ENST00000542230 TNXBP22105 4242 aa9.78□□□□□ -0.84
TMEM50B-210ENST00000542230 LINC00208Q96KT6 92 aa9.78□□□□□ -0.84
TMEM50B-210ENST00000542230 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
TMEM50B-210ENST00000542230 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
TMEM50B-210ENST00000542230 H0Y9P7 68 aa9.77□□□□□ -0.85
TMEM50B-210ENST00000542230 SPINK1P00995 79 aa9.77□□□□□ -0.85
TMEM50B-210ENST00000542230 LIMD2Q9BT23 127 aa9.75□□□□□ -0.85
TMEM50B-210ENST00000542230 FAM236DA0A1B0GTK5 79 aa9.74□□□□□ -0.85
TMEM50B-210ENST00000542230 FAM236CP0DP71 79 aa9.74□□□□□ -0.85
TMEM50B-210ENST00000542230 Q5VSD8 79 aa9.74□□□□□ -0.85
TMEM50B-210ENST00000542230 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
TMEM50B-210ENST00000542230 NDUFC1O43677 76 aa9.72□□□□□ -0.85
TMEM50B-210ENST00000542230 OXTP01178 125 aa9.72□□□□□ -0.85
TMEM50B-210ENST00000542230 MP68P56378 58 aa9.72□□□□□ -0.85
TMEM50B-210ENST00000542230 LINC00313P59037 77 aa9.72□□□□□ -0.85
TMEM50B-210ENST00000542230 TRAV22A0A0B4J277 110 aa9.71□□□□□ -0.86
TMEM50B-210ENST00000542230 Q5W150 140 aa9.7□□□□□ -0.86
TMEM50B-210ENST00000542230 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
TMEM50B-210ENST00000542230 C1orf64Q8NEQ6 169 aa9.69□□□□□ -0.86
TMEM50B-210ENST00000542230 PRR4Q16378 134 aa9.67□□□□□ -0.86
TMEM50B-210ENST00000542230 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
TMEM50B-210ENST00000542230 KRTAP16-1A8MUX0 517 aa9.66□□□□□ -0.86
TMEM50B-210ENST00000542230 C8orf87E5RJ46 101 aa9.66□□□□□ -0.86
TMEM50B-210ENST00000542230 RETNLBQ9BQ08 111 aa9.66□□□□□ -0.86
TMEM50B-210ENST00000542230 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
TMEM50B-210ENST00000542230 SPAG11AQ6PDA7 123 aa9.65□□□□□ -0.87
TMEM50B-210ENST00000542230 Q8N1X5 172 aa9.63□□□□□ -0.87
TMEM50B-210ENST00000542230 RPS29P62273 56 aaKnown RBP9.61□□□□□ -0.87
TMEM50B-210ENST00000542230 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
TMEM50B-210ENST00000542230 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
TMEM50B-210ENST00000542230 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
TMEM50B-210ENST00000542230 H3BPC8 53 aa9.58□□□□□ -0.88
TMEM50B-210ENST00000542230 RPS28P62857 69 aaKnown RBP9.58□□□□□ -0.88
TMEM50B-210ENST00000542230 KRTAP10-8P60410 259 aa9.56□□□□□ -0.88
TMEM50B-210ENST00000542230 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
TMEM50B-210ENST00000542230 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
TMEM50B-210ENST00000542230 ATP5EP56381 51 aaPredicted RBP9.51□□□□□ -0.89
TMEM50B-210ENST00000542230 KRTAP4-5Q9BYR2 181 aa9.49□□□□□ -0.89
TMEM50B-210ENST00000542230 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.9
TMEM50B-210ENST00000542230 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
TMEM50B-210ENST00000542230 LOC101927531A0A1B0GV80 90 aa9.43□□□□□ -0.9
TMEM50B-210ENST00000542230 ABCA13Q86UQ4 5058 aa9.43□□□□□ -0.9
TMEM50B-210ENST00000542230 SPANXA2-OT1Q8N9U9 137 aa9.43□□□□□ -0.9
TMEM50B-210ENST00000542230 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
TMEM50B-210ENST00000542230 FP248Q71RG6 208 aaPredicted RBP9.39□□□□□ -0.91
TMEM50B-210ENST00000542230 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
TMEM50B-210ENST00000542230 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
TMEM50B-210ENST00000542230 HRES1P13985 223 aa9.35□□□□□ -0.91
TMEM50B-210ENST00000542230 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.91
TMEM50B-210ENST00000542230 A8MUU9 505 aa9.33□□□□□ -0.92
TMEM50B-210ENST00000542230 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
TMEM50B-210ENST00000542230 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
TMEM50B-210ENST00000542230 HERC2O95714 4834 aa9.31□□□□□ -0.92
TMEM50B-210ENST00000542230 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
TMEM50B-210ENST00000542230 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
TMEM50B-210ENST00000542230 COA5Q86WW8 74 aa9.28□□□□□ -0.92
TMEM50B-210ENST00000542230 LPAP08519 4548 aa9.25□□□□□ -0.93
TMEM50B-210ENST00000542230 LRP2P98164 4655 aa9.22□□□□□ -0.93
TMEM50B-210ENST00000542230 C7orf65Q6ZTY9 151 aa9.19□□□□□ -0.94
TMEM50B-210ENST00000542230 Q75L30 129 aa9.19□□□□□ -0.94
TMEM50B-210ENST00000542230 XP32Q5T750 250 aa9.17□□□□□ -0.94
TMEM50B-210ENST00000542230 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
TMEM50B-210ENST00000542230 SPINK7P58062 85 aa9.14□□□□□ -0.95
TMEM50B-210ENST00000542230 ACYP2P14621 99 aa9.11□□□□□ -0.95
TMEM50B-210ENST00000542230 PSPHP1O15172 72 aa9.09□□□□□ -0.95
TMEM50B-210ENST00000542230 Q1T7F1 81 aa9.09□□□□□ -0.95
TMEM50B-210ENST00000542230 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
TMEM50B-210ENST00000542230 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
TMEM50B-210ENST00000542230 KRTAP3-1Q9BYR8 98 aa9.05□□□□□ -0.96
TMEM50B-210ENST00000542230 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
TMEM50B-210ENST00000542230 A8MUN3 132 aa9.04□□□□□ -0.96
TMEM50B-210ENST00000542230 CHKB-CPT1BH3BT56 60 aa9.01□□□□□ -0.97
TMEM50B-210ENST00000542230 J3QL48 77 aa8.98□□□□□ -0.97
TMEM50B-210ENST00000542230 HERC1Q15751 4861 aa8.97□□□□□ -0.97
TMEM50B-210ENST00000542230 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
TMEM50B-210ENST00000542230 PRR15LQ9BU68 103 aa8.96□□□□□ -0.98
TMEM50B-210ENST00000542230 Q5VV11 94 aa8.94□□□□□ -0.98
TMEM50B-210ENST00000542230 V9GYY9 64 aa8.92□□□□□ -0.98
TMEM50B-210ENST00000542230 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
TMEM50B-210ENST00000542230 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
TMEM50B-210ENST00000542230 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
TMEM50B-210ENST00000542230 A8MU10 97 aa8.83□□□□□ -1
TMEM50B-210ENST00000542230 MUC2Q02817 5179 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms