RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 A8MWP4 228 aa6.97□□□□□ -1.29
LMO3-228ENST00000541846 FP248Q71RG6 208 aaPredicted RBP6.97□□□□□ -1.29
LMO3-228ENST00000541846 K7EQZ3 153 aa6.96□□□□□ -1.3
LMO3-228ENST00000541846 Q8N9L7 120 aa6.96□□□□□ -1.3
LMO3-228ENST00000541846 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
LMO3-228ENST00000541846 PRR4Q16378 134 aa6.95□□□□□ -1.3
LMO3-228ENST00000541846 IGLV7-46A0A075B6I9 117 aa6.94□□□□□ -1.3
LMO3-228ENST00000541846 NDUFB1O75438 58 aa6.94□□□□□ -1.3
LMO3-228ENST00000541846 PRR15Q8IV56 129 aa6.94□□□□□ -1.3
LMO3-228ENST00000541846 LRP2P98164 4655 aa6.93□□□□□ -1.3
LMO3-228ENST00000541846 IGHV6-1A0A0B4J1U7 121 aa6.93□□□□□ -1.3
LMO3-228ENST00000541846 MT-ATP8P03928 68 aa6.93□□□□□ -1.3
LMO3-228ENST00000541846 LPAP08519 4548 aa6.91□□□□□ -1.3
LMO3-228ENST00000541846 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.3
LMO3-228ENST00000541846 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
LMO3-228ENST00000541846 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
LMO3-228ENST00000541846 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
LMO3-228ENST00000541846 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
LMO3-228ENST00000541846 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
LMO3-228ENST00000541846 KRTAP13-3Q3SY46 172 aa6.88□□□□□ -1.31
LMO3-228ENST00000541846 LINC00313P59037 77 aa6.87□□□□□ -1.31
LMO3-228ENST00000541846 A0A087WVE0 104 aa6.86□□□□□ -1.31
LMO3-228ENST00000541846 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
LMO3-228ENST00000541846 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
LMO3-228ENST00000541846 HCG22E2RYF7 251 aa6.84□□□□□ -1.31
LMO3-228ENST00000541846 WFDC13Q8IUB5 93 aa6.84□□□□□ -1.31
LMO3-228ENST00000541846 KRTAP16-1A8MUX0 517 aa6.83□□□□□ -1.32
LMO3-228ENST00000541846 hDV103S1A0JD37 113 aa6.82□□□□□ -1.32
LMO3-228ENST00000541846 CASC2Q6XLA1 102 aa6.82□□□□□ -1.32
LMO3-228ENST00000541846 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
LMO3-228ENST00000541846 TMEM254Q8TBM7 123 aa6.81□□□□□ -1.32
LMO3-228ENST00000541846 XP32Q5T750 250 aa6.79□□□□□ -1.32
LMO3-228ENST00000541846 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
LMO3-228ENST00000541846 MUC17Q685J3 4493 aa6.77□□□□□ -1.33
LMO3-228ENST00000541846 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
LMO3-228ENST00000541846 A8MUU9 505 aa6.75□□□□□ -1.33
LMO3-228ENST00000541846 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
LMO3-228ENST00000541846 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
LMO3-228ENST00000541846 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
LMO3-228ENST00000541846 NDUFS5O43920 106 aa6.72□□□□□ -1.33
LMO3-228ENST00000541846 Q75L30 129 aa6.72□□□□□ -1.33
LMO3-228ENST00000541846 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.34
LMO3-228ENST00000541846 RNF213Q63HN8 5207 aa6.69□□□□□ -1.34
LMO3-228ENST00000541846 SCGB1A1P11684 91 aa6.68□□□□□ -1.34
LMO3-228ENST00000541846 OCR1Q9BZK8 76 aa6.66□□□□□ -1.34
LMO3-228ENST00000541846 TP53AIP1Q9HCN2 124 aa6.66□□□□□ -1.34
LMO3-228ENST00000541846 ATOX1O00244 68 aa6.65□□□□□ -1.34
LMO3-228ENST00000541846 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.34
LMO3-228ENST00000541846 MUC2Q02817 5179 aa6.64□□□□□ -1.35
LMO3-228ENST00000541846 Q5W150 140 aa6.63□□□□□ -1.35
LMO3-228ENST00000541846 ATP11AUNQ6ZP68 121 aa6.63□□□□□ -1.35
LMO3-228ENST00000541846 UQCRQO14949 82 aa6.62□□□□□ -1.35
LMO3-228ENST00000541846 PCOTHQ58A44 107 aa6.62□□□□□ -1.35
LMO3-228ENST00000541846 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
LMO3-228ENST00000541846 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
LMO3-228ENST00000541846 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
LMO3-228ENST00000541846 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.35
LMO3-228ENST00000541846 H0Y9P7 68 aa6.57□□□□□ -1.36
LMO3-228ENST00000541846 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
LMO3-228ENST00000541846 C5orf47Q569G3 176 aa6.55□□□□□ -1.36
LMO3-228ENST00000541846 MP68P56378 58 aa6.52□□□□□ -1.37
LMO3-228ENST00000541846 ANAPC13Q9BS18 74 aa6.52□□□□□ -1.37
LMO3-228ENST00000541846 IGKV2D-30A0A075B6S6 120 aa6.51□□□□□ -1.37
LMO3-228ENST00000541846 IGKV2-30P06310 120 aa6.51□□□□□ -1.37
LMO3-228ENST00000541846 LINC00208Q96KT6 92 aa6.51□□□□□ -1.37
LMO3-228ENST00000541846 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
LMO3-228ENST00000541846 COX7CP15954 63 aa6.5□□□□□ -1.37
LMO3-228ENST00000541846 SPINK7P58062 85 aa6.5□□□□□ -1.37
LMO3-228ENST00000541846 LOC101927531A0A1B0GV80 90 aa6.49□□□□□ -1.37
LMO3-228ENST00000541846 C7orf65Q6ZTY9 151 aa6.49□□□□□ -1.37
LMO3-228ENST00000541846 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
LMO3-228ENST00000541846 H3BPC8 53 aa6.48□□□□□ -1.37
LMO3-228ENST00000541846 A0A0U1RQV1 116 aa6.47□□□□□ -1.37
LMO3-228ENST00000541846 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
LMO3-228ENST00000541846 CYP4F30PQ9H0H9 118 aa6.46□□□□□ -1.38
LMO3-228ENST00000541846 FAT4Q6V0I7 4981 aa6.44□□□□□ -1.38
LMO3-228ENST00000541846 SNURFQ9Y675 71 aa6.43□□□□□ -1.38
LMO3-228ENST00000541846 HRES1P13985 223 aa6.42□□□□□ -1.38
LMO3-228ENST00000541846 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
LMO3-228ENST00000541846 KLKP1Q107X0 134 aa6.4□□□□□ -1.38
LMO3-228ENST00000541846 MPLKIPQ8TAP9 179 aa6.37□□□□□ -1.39
LMO3-228ENST00000541846 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
LMO3-228ENST00000541846 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
LMO3-228ENST00000541846 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
LMO3-228ENST00000541846 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
LMO3-228ENST00000541846 PCP4P48539 62 aa6.32□□□□□ -1.4
LMO3-228ENST00000541846 RBM12B-AS1Q9P1G2 102 aa6.32□□□□□ -1.4
LMO3-228ENST00000541846 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
LMO3-228ENST00000541846 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
LMO3-228ENST00000541846 H7BZZ5 65 aa6.29□□□□□ -1.4
LMO3-228ENST00000541846 NDUFC1O43677 76 aa6.29□□□□□ -1.4
LMO3-228ENST00000541846 FAM236DA0A1B0GTK5 79 aa6.27□□□□□ -1.41
LMO3-228ENST00000541846 FAM236CP0DP71 79 aa6.27□□□□□ -1.41
LMO3-228ENST00000541846 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
LMO3-228ENST00000541846 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
LMO3-228ENST00000541846 DMAC1Q96GE9 116 aa6.22□□□□□ -1.41
LMO3-228ENST00000541846 A8MUN3 132 aa6.2□□□□□ -1.42
LMO3-228ENST00000541846 H1FX-AS1Q4G0G2 97 aa6.2□□□□□ -1.42
LMO3-228ENST00000541846 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
LMO3-228ENST00000541846 MT1HP80294 61 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms