RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
CHFR-219ENST00000541341 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
CHFR-219ENST00000541341 C9orf163Q8N9P6 203 aa6.48□□□□□ -1.37
CHFR-219ENST00000541341 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
CHFR-219ENST00000541341 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
CHFR-219ENST00000541341 LINC00472Q9H8W2 130 aa6.47□□□□□ -1.37
CHFR-219ENST00000541341 A8MUN3 132 aa6.46□□□□□ -1.38
CHFR-219ENST00000541341 Q5VSD8 79 aa6.46□□□□□ -1.38
CHFR-219ENST00000541341 Q5VV11 94 aa6.46□□□□□ -1.38
CHFR-219ENST00000541341 Q6ZRN7 208 aaPredicted RBP6.46□□□□□ -1.38
CHFR-219ENST00000541341 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
CHFR-219ENST00000541341 ZNF706Q9Y5V0 76 aaPredicted RBP6.46□□□□□ -1.38
CHFR-219ENST00000541341 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
CHFR-219ENST00000541341 LRCOL1A6NCL2 159 aa6.45□□□□□ -1.38
CHFR-219ENST00000541341 FAM168BA1KXE4 195 aa6.44□□□□□ -1.38
CHFR-219ENST00000541341 KRTAP10-1P60331 282 aa6.44□□□□□ -1.38
CHFR-219ENST00000541341 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
CHFR-219ENST00000541341 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
CHFR-219ENST00000541341 A6NED7 52 aa6.43□□□□□ -1.38
CHFR-219ENST00000541341 PHF5AQ7RTV0 110 aaKnown RBP6.43□□□□□ -1.38
CHFR-219ENST00000541341 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
CHFR-219ENST00000541341 COA5Q86WW8 74 aa6.42□□□□□ -1.38
CHFR-219ENST00000541341 A0A087X002 238 aa6.41□□□□□ -1.38
CHFR-219ENST00000541341 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
CHFR-219ENST00000541341 LCE2DQ5TA82 110 aaPredicted RBP6.4□□□□□ -1.38
CHFR-219ENST00000541341 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.39
CHFR-219ENST00000541341 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.39
CHFR-219ENST00000541341 A0A087WTM6 91 aa6.39□□□□□ -1.39
CHFR-219ENST00000541341 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
CHFR-219ENST00000541341 PRR4Q16378 134 aa6.39□□□□□ -1.39
CHFR-219ENST00000541341 ASB16-AS1Q495Z4 193 aa6.39□□□□□ -1.39
CHFR-219ENST00000541341 FLG2Q5D862 2391 aaPredicted RBP6.38□□□□□ -1.39
CHFR-219ENST00000541341 PRLHP81277 87 aa6.38□□□□□ -1.39
CHFR-219ENST00000541341 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
CHFR-219ENST00000541341 A0A096LNI7 61 aa6.37□□□□□ -1.39
CHFR-219ENST00000541341 IGLV5-52A0A0A0MRZ9 124 aa6.35□□□□□ -1.39
CHFR-219ENST00000541341 FAM229AH3BQW9 127 aa6.35□□□□□ -1.39
CHFR-219ENST00000541341 C8orf17Q9NRJ1 99 aa6.35□□□□□ -1.39
CHFR-219ENST00000541341 J3QL48 77 aa6.34□□□□□ -1.39
CHFR-219ENST00000541341 DEFB116Q30KQ4 102 aa6.34□□□□□ -1.39
CHFR-219ENST00000541341 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
CHFR-219ENST00000541341 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
CHFR-219ENST00000541341 C7orf65Q6ZTY9 151 aa6.33□□□□□ -1.4
CHFR-219ENST00000541341 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
CHFR-219ENST00000541341 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
CHFR-219ENST00000541341 PLAC8Q9NZF1 115 aa6.33□□□□□ -1.4
CHFR-219ENST00000541341 A0A1W2PNN7 141 aa6.32□□□□□ -1.4
CHFR-219ENST00000541341 ACYP2P14621 99 aa6.32□□□□□ -1.4
CHFR-219ENST00000541341 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
CHFR-219ENST00000541341 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
CHFR-219ENST00000541341 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
CHFR-219ENST00000541341 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
CHFR-219ENST00000541341 A6NN06 94 aa6.29□□□□□ -1.4
CHFR-219ENST00000541341 FAT3Q8TDW7 4589 aa6.29□□□□□ -1.4
CHFR-219ENST00000541341 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
CHFR-219ENST00000541341 HMCN2Q8NDA2 5059 aa6.27□□□□□ -1.41
CHFR-219ENST00000541341 LCA10Q71F78 164 aa6.27□□□□□ -1.41
CHFR-219ENST00000541341 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
CHFR-219ENST00000541341 SPAG11AQ6PDA7 123 aa6.25□□□□□ -1.41
CHFR-219ENST00000541341 PCOTHQ58A44 107 aa6.24□□□□□ -1.41
CHFR-219ENST00000541341 Q96NJ1 140 aa6.24□□□□□ -1.41
CHFR-219ENST00000541341 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
CHFR-219ENST00000541341 PLA2G1BP04054 148 aaKnown RBP6.23□□□□□ -1.41
CHFR-219ENST00000541341 HRES1P13985 223 aa6.23□□□□□ -1.41
CHFR-219ENST00000541341 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
CHFR-219ENST00000541341 A0A0G2JQZ4 141 aa6.21□□□□□ -1.42
CHFR-219ENST00000541341 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
CHFR-219ENST00000541341 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
CHFR-219ENST00000541341 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
CHFR-219ENST00000541341 IGLV9-49A0A0B4J1Y8 123 aa6.19□□□□□ -1.42
CHFR-219ENST00000541341 Q6ZSA8 131 aa6.19□□□□□ -1.42
CHFR-219ENST00000541341 SPACA4Q8TDM5 124 aa6.18□□□□□ -1.42
CHFR-219ENST00000541341 ZNF861PO60384 105 aa6.17□□□□□ -1.42
CHFR-219ENST00000541341 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
CHFR-219ENST00000541341 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
CHFR-219ENST00000541341 CIRBP-AS1Q8TBR5 109 aa6.17□□□□□ -1.42
CHFR-219ENST00000541341 DMAC1Q96GE9 116 aa6.16□□□□□ -1.42
CHFR-219ENST00000541341 A0A1B0GU69 56 aa6.15□□□□□ -1.42
CHFR-219ENST00000541341 PANO1I0J062 215 aa6.14□□□□□ -1.43
CHFR-219ENST00000541341 CHTF8P0CG12 524 aa6.14□□□□□ -1.43
CHFR-219ENST00000541341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
CHFR-219ENST00000541341 UQCR11O14957 56 aa6.13□□□□□ -1.43
CHFR-219ENST00000541341 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
CHFR-219ENST00000541341 SPINK7P58062 85 aa6.11□□□□□ -1.43
CHFR-219ENST00000541341 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
CHFR-219ENST00000541341 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
CHFR-219ENST00000541341 LINC00313P59037 77 aa6.1□□□□□ -1.43
CHFR-219ENST00000541341 KRTAP13-3Q3SY46 172 aa6.09□□□□□ -1.43
CHFR-219ENST00000541341 RETNLBQ9BQ08 111 aa6.09□□□□□ -1.43
CHFR-219ENST00000541341 A8MU10 97 aa6.07□□□□□ -1.44
CHFR-219ENST00000541341 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
CHFR-219ENST00000541341 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
CHFR-219ENST00000541341 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
CHFR-219ENST00000541341 IGLV7-43P04211 117 aa6.04□□□□□ -1.44
CHFR-219ENST00000541341 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
CHFR-219ENST00000541341 LRP2P98164 4655 aa6.03□□□□□ -1.44
CHFR-219ENST00000541341 TNXBP22105 4242 aa6.03□□□□□ -1.44
CHFR-219ENST00000541341 Q5W150 140 aa6.02□□□□□ -1.45
CHFR-219ENST00000541341 SPINK6Q6UWN8 80 aa6.01□□□□□ -1.45
CHFR-219ENST00000541341 LINC01554Q52M75 96 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms