RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 BAALC-AS2P0C853 105 aa12.04□□□□□ -0.48
LEMD3-203ENST00000541171 IGKV4-1P06312 121 aa12.02□□□□□ -0.49
LEMD3-203ENST00000541171 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.49
LEMD3-203ENST00000541171 CCKP06307 115 aa12.01□□□□□ -0.49
LEMD3-203ENST00000541171 DSCR8Q96T75 97 aa11.98□□□□□ -0.49
LEMD3-203ENST00000541171 RBM12B-AS1Q9P1G2 102 aa11.98□□□□□ -0.49
LEMD3-203ENST00000541171 NOTCH2NLQ7Z3S9 236 aa11.97□□□□□ -0.49
LEMD3-203ENST00000541171 FCGBPQ9Y6R7 5405 aaPredicted RBP11.97□□□□□ -0.49
LEMD3-203ENST00000541171 C9orf118A6NHY6 69 aa11.96□□□□□ -0.49
LEMD3-203ENST00000541171 MT1FP04733 61 aa11.96□□□□□ -0.49
LEMD3-203ENST00000541171 HRES1P13985 223 aa11.95□□□□□ -0.5
LEMD3-203ENST00000541171 DEFB116Q30KQ4 102 aa11.95□□□□□ -0.5
LEMD3-203ENST00000541171 JMJD7-PLA2G4BH0Y9G9 81 aa11.94□□□□□ -0.5
LEMD3-203ENST00000541171 TAX1BP3O14907 124 aa11.94□□□□□ -0.5
LEMD3-203ENST00000541171 LCE2BO14633 110 aa11.93□□□□□ -0.5
LEMD3-203ENST00000541171 C21orf62-AS1Q17RA5 79 aa11.93□□□□□ -0.5
LEMD3-203ENST00000541171 C9JAW5 83 aa11.92□□□□□ -0.5
LEMD3-203ENST00000541171 KRTAP10-10P60014 251 aa11.92□□□□□ -0.5
LEMD3-203ENST00000541171 MPLKIPQ8TAP9 179 aa11.92□□□□□ -0.5
LEMD3-203ENST00000541171 A0A1W2PPM0 123 aa11.9□□□□□ -0.5
LEMD3-203ENST00000541171 KRTAP19-1Q8IUB9 90 aa11.9□□□□□ -0.5
LEMD3-203ENST00000541171 VPS25Q9BRG1 176 aa11.9□□□□□ -0.5
LEMD3-203ENST00000541171 IGHV6-1A0A0B4J1U7 121 aa11.89□□□□□ -0.51
LEMD3-203ENST00000541171 LOC110117498A0A087WWA1 95 aa11.87□□□□□ -0.51
LEMD3-203ENST00000541171 KRTAP9-3Q9BYQ3 159 aa11.87□□□□□ -0.51
LEMD3-203ENST00000541171 LINC00472Q9H8W2 130 aa11.87□□□□□ -0.51
LEMD3-203ENST00000541171 PDE6GP18545 87 aa11.86□□□□□ -0.51
LEMD3-203ENST00000541171 A0A1B0GW54 56 aa11.84□□□□□ -0.51
LEMD3-203ENST00000541171 Q6ZQT0 140 aa11.84□□□□□ -0.51
LEMD3-203ENST00000541171 H3BT86 120 aa11.83□□□□□ -0.52
LEMD3-203ENST00000541171 COL5A1-AS1Q5SY13 56 aa11.8□□□□□ -0.52
LEMD3-203ENST00000541171 C14orf132Q9NPU4 83 aa11.78□□□□□ -0.52
LEMD3-203ENST00000541171 SPCS1Q9Y6A9 102 aa11.76□□□□□ -0.53
LEMD3-203ENST00000541171 J3KT08 172 aa11.75□□□□□ -0.53
LEMD3-203ENST00000541171 MTURNQ8N3F0 131 aa11.75□□□□□ -0.53
LEMD3-203ENST00000541171 A0A1B0GVX0 72 aa11.73□□□□□ -0.53
LEMD3-203ENST00000541171 C8orf87E5RJ46 101 aa11.73□□□□□ -0.53
LEMD3-203ENST00000541171 MACF1Q9UPN3 7388 aaKnown RBP11.7□□□□□ -0.54
LEMD3-203ENST00000541171 ZCCHC13Q8WW36 166 aaKnown RBP11.7□□□□□ -0.54
LEMD3-203ENST00000541171 SYNE2Q8WXH0 6885 aaKnown RBP11.68□□□□□ -0.54
LEMD3-203ENST00000541171 SPINK7P58062 85 aa11.68□□□□□ -0.54
LEMD3-203ENST00000541171 K7EP34 96 aa11.62□□□□□ -0.55
LEMD3-203ENST00000541171 NDUFB1O75438 58 aa11.61□□□□□ -0.55
LEMD3-203ENST00000541171 PCP4L1A6NKN8 68 aa11.6□□□□□ -0.55
LEMD3-203ENST00000541171 LINC00846Q9NV44 126 aa11.6□□□□□ -0.55
LEMD3-203ENST00000541171 A8MWP4 228 aa11.59□□□□□ -0.55
LEMD3-203ENST00000541171 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
LEMD3-203ENST00000541171 NREPQ16612 68 aa11.58□□□□□ -0.56
LEMD3-203ENST00000541171 PRO0461Q9UI25 63 aa11.57□□□□□ -0.56
LEMD3-203ENST00000541171 KRTAP19-6Q3LI70 58 aa11.54□□□□□ -0.56
LEMD3-203ENST00000541171 WFDC13Q8IUB5 93 aa11.54□□□□□ -0.56
LEMD3-203ENST00000541171 Q8N9P0 234 aaPredicted RBP11.53□□□□□ -0.56
LEMD3-203ENST00000541171 IGKV3D-7A0A0C4DH55 119 aa11.52□□□□□ -0.57
LEMD3-203ENST00000541171 GTF2H5Q6ZYL4 71 aa11.52□□□□□ -0.57
LEMD3-203ENST00000541171 C8orf17Q9NRJ1 99 aa11.5□□□□□ -0.57
LEMD3-203ENST00000541171 PRR15Q8IV56 129 aa11.48□□□□□ -0.57
LEMD3-203ENST00000541171 F8W1H4 67 aa11.41□□□□□ -0.58
LEMD3-203ENST00000541171 BPY2O14599 106 aa11.41□□□□□ -0.58
LEMD3-203ENST00000541171 Q6ZVQ6 151 aa11.41□□□□□ -0.58
LEMD3-203ENST00000541171 MMP24-AS1A0A0U1RRL7 71 aa11.38□□□□□ -0.59
LEMD3-203ENST00000541171 K7EQZ3 153 aa11.38□□□□□ -0.59
LEMD3-203ENST00000541171 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
LEMD3-203ENST00000541171 MRPL34Q9BQ48 92 aaKnown RBP11.33□□□□□ -0.6
LEMD3-203ENST00000541171 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
LEMD3-203ENST00000541171 hDV103S1A0JD37 113 aa11.31□□□□□ -0.6
LEMD3-203ENST00000541171 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
LEMD3-203ENST00000541171 H1FX-AS1Q4G0G2 97 aa11.29□□□□□ -0.6
LEMD3-203ENST00000541171 KRTAP6-3Q3LI67 103 aa11.24□□□□□ -0.61
LEMD3-203ENST00000541171 Q8N9L7 120 aa11.23□□□□□ -0.61
LEMD3-203ENST00000541171 NDUFS5O43920 106 aa11.22□□□□□ -0.61
LEMD3-203ENST00000541171 CASC2Q6XLA1 102 aa11.18□□□□□ -0.62
LEMD3-203ENST00000541171 IGKV2D-30A0A075B6S6 120 aa11.16□□□□□ -0.62
LEMD3-203ENST00000541171 IGKV2-30P06310 120 aa11.16□□□□□ -0.62
LEMD3-203ENST00000541171 CXCL6P80162 114 aa11.14□□□□□ -0.63
LEMD3-203ENST00000541171 HCG22E2RYF7 251 aa11.11□□□□□ -0.63
LEMD3-203ENST00000541171 ACYP1P07311 99 aa11.1□□□□□ -0.63
LEMD3-203ENST00000541171 FAM240AA0A1B0GVK7 77 aa11.09□□□□□ -0.63
LEMD3-203ENST00000541171 C7orf65Q6ZTY9 151 aa11.08□□□□□ -0.64
LEMD3-203ENST00000541171 Q5W150 140 aa11.07□□□□□ -0.64
LEMD3-203ENST00000541171 NEBP20929 6669 aa11□□□□□ -0.65
LEMD3-203ENST00000541171 A0A1B0GV90 55 aa11□□□□□ -0.65
LEMD3-203ENST00000541171 C4orf26Q17RF5 130 aa11□□□□□ -0.65
LEMD3-203ENST00000541171 ATP5EP2Q5VTU8 51 aa10.98□□□□□ -0.65
LEMD3-203ENST00000541171 FAM236AA0A1B0GUQ0 79 aa10.95□□□□□ -0.66
LEMD3-203ENST00000541171 FAM236BA0A1B0GV22 79 aa10.95□□□□□ -0.66
LEMD3-203ENST00000541171 C5orf47Q569G3 176 aa10.95□□□□□ -0.66
LEMD3-203ENST00000541171 A6NN06 94 aa10.92□□□□□ -0.66
LEMD3-203ENST00000541171 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
LEMD3-203ENST00000541171 MT1BP07438 61 aa10.86□□□□□ -0.67
LEMD3-203ENST00000541171 Q5VV11 94 aa10.84□□□□□ -0.67
LEMD3-203ENST00000541171 MUC12Q9UKN1 5478 aa10.84□□□□□ -0.67
LEMD3-203ENST00000541171 LINC00643Q86TS7 51 aa10.82□□□□□ -0.68
LEMD3-203ENST00000541171 S4R3F8 94 aa10.81□□□□□ -0.68
LEMD3-203ENST00000541171 KRTAP3-1Q9BYR8 98 aa10.8□□□□□ -0.68
LEMD3-203ENST00000541171 HIST1H4AP62805 103 aaKnown RBP10.78□□□□□ -0.68
LEMD3-203ENST00000541171 CSAG1Q6PB30 78 aa10.77□□□□□ -0.69
LEMD3-203ENST00000541171 J3QR89 54 aa10.75□□□□□ -0.69
LEMD3-203ENST00000541171 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
LEMD3-203ENST00000541171 SPRR2GQ9BYE4 73 aa10.74□□□□□ -0.69
LEMD3-203ENST00000541171 LCA10Q71F78 164 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms