RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 MTURNQ8N3F0 131 aa5.63□□□□□ -1.51
HMGA2-209ENST00000539662 DSCR8Q96T75 97 aa5.63□□□□□ -1.51
HMGA2-209ENST00000539662 A0A1W2PPM0 123 aa5.61□□□□□ -1.51
HMGA2-209ENST00000539662 A8MUU9 505 aa5.61□□□□□ -1.51
HMGA2-209ENST00000539662 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
HMGA2-209ENST00000539662 Q6ZQT0 140 aa5.61□□□□□ -1.51
HMGA2-209ENST00000539662 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
HMGA2-209ENST00000539662 C14orf132Q9NPU4 83 aa5.61□□□□□ -1.51
HMGA2-209ENST00000539662 TRBV20-1A0A075B6N2 111 aa5.6□□□□□ -1.51
HMGA2-209ENST00000539662 LOC110117498A0A087WWA1 95 aa5.58□□□□□ -1.52
HMGA2-209ENST00000539662 IGHV6-1A0A0B4J1U7 121 aa5.58□□□□□ -1.52
HMGA2-209ENST00000539662 LINC00313P59037 77 aa5.58□□□□□ -1.52
HMGA2-209ENST00000539662 MT1HP80294 61 aa5.58□□□□□ -1.52
HMGA2-209ENST00000539662 LYRM7Q5U5X0 104 aa5.58□□□□□ -1.52
HMGA2-209ENST00000539662 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
HMGA2-209ENST00000539662 JMJD7-PLA2G4BH0Y9G9 81 aa5.57□□□□□ -1.52
HMGA2-209ENST00000539662 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
HMGA2-209ENST00000539662 A0A1B0GVX0 72 aa5.54□□□□□ -1.52
HMGA2-209ENST00000539662 H3BT86 120 aa5.53□□□□□ -1.52
HMGA2-209ENST00000539662 SPCS1Q9Y6A9 102 aa5.53□□□□□ -1.52
HMGA2-209ENST00000539662 COL5A1-AS1Q5SY13 56 aa5.51□□□□□ -1.53
HMGA2-209ENST00000539662 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
HMGA2-209ENST00000539662 IGKV3D-7A0A0C4DH55 119 aa5.5□□□□□ -1.53
HMGA2-209ENST00000539662 PDE6GP18545 87 aa5.5□□□□□ -1.53
HMGA2-209ENST00000539662 PRO0461Q9UI25 63 aa5.5□□□□□ -1.53
HMGA2-209ENST00000539662 C8orf87E5RJ46 101 aa5.48□□□□□ -1.53
HMGA2-209ENST00000539662 J3KT08 172 aa5.48□□□□□ -1.53
HMGA2-209ENST00000539662 COX6B2Q6YFQ2 88 aa5.48□□□□□ -1.53
HMGA2-209ENST00000539662 A0A1B0GW54 56 aa5.47□□□□□ -1.53
HMGA2-209ENST00000539662 A8MWP4 228 aa5.47□□□□□ -1.53
HMGA2-209ENST00000539662 K7EP34 96 aa5.46□□□□□ -1.54
HMGA2-209ENST00000539662 NREPQ16612 68 aa5.46□□□□□ -1.54
HMGA2-209ENST00000539662 C8orf17Q9NRJ1 99 aa5.46□□□□□ -1.54
HMGA2-209ENST00000539662 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
HMGA2-209ENST00000539662 NDUFB1O75438 58 aa5.44□□□□□ -1.54
HMGA2-209ENST00000539662 PRR15Q8IV56 129 aa5.44□□□□□ -1.54
HMGA2-209ENST00000539662 K7EQZ3 153 aa5.43□□□□□ -1.54
HMGA2-209ENST00000539662 HRES1P13985 223 aa5.43□□□□□ -1.54
HMGA2-209ENST00000539662 C5orf47Q569G3 176 aa5.43□□□□□ -1.54
HMGA2-209ENST00000539662 Q8N9P0 234 aaPredicted RBP5.43□□□□□ -1.54
HMGA2-209ENST00000539662 MMP24-AS1A0A0U1RRL7 71 aa5.42□□□□□ -1.54
HMGA2-209ENST00000539662 M0R2T5 61 aa5.41□□□□□ -1.54
HMGA2-209ENST00000539662 Q6ZVQ6 151 aa5.41□□□□□ -1.54
HMGA2-209ENST00000539662 ZCCHC13Q8WW36 166 aaKnown RBP5.41□□□□□ -1.54
HMGA2-209ENST00000539662 Q8N9L7 120 aa5.4□□□□□ -1.54
HMGA2-209ENST00000539662 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
HMGA2-209ENST00000539662 LINC00846Q9NV44 126 aa5.38□□□□□ -1.55
HMGA2-209ENST00000539662 BPY2O14599 106 aa5.37□□□□□ -1.55
HMGA2-209ENST00000539662 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
HMGA2-209ENST00000539662 SPINK7P58062 85 aa5.36□□□□□ -1.55
HMGA2-209ENST00000539662 TMEM254Q8TBM7 123 aa5.36□□□□□ -1.55
HMGA2-209ENST00000539662 MRPL34Q9BQ48 92 aaKnown RBP5.36□□□□□ -1.55
HMGA2-209ENST00000539662 ETDBQ3ZM63 59 aa5.35□□□□□ -1.55
HMGA2-209ENST00000539662 GTF2H5Q6ZYL4 71 aa5.35□□□□□ -1.55
HMGA2-209ENST00000539662 hDV103S1A0JD37 113 aa5.34□□□□□ -1.55
HMGA2-209ENST00000539662 WFDC13Q8IUB5 93 aa5.34□□□□□ -1.55
HMGA2-209ENST00000539662 V9GYY9 64 aa5.34□□□□□ -1.55
HMGA2-209ENST00000539662 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
HMGA2-209ENST00000539662 FAM236DA0A1B0GTK5 79 aa5.32□□□□□ -1.56
HMGA2-209ENST00000539662 F8W1H4 67 aa5.32□□□□□ -1.56
HMGA2-209ENST00000539662 FAM236CP0DP71 79 aa5.32□□□□□ -1.56
HMGA2-209ENST00000539662 Q5W150 140 aa5.32□□□□□ -1.56
HMGA2-209ENST00000539662 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
HMGA2-209ENST00000539662 NDUFS5O43920 106 aa5.3□□□□□ -1.56
HMGA2-209ENST00000539662 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
HMGA2-209ENST00000539662 CASC2Q6XLA1 102 aa5.29□□□□□ -1.56
HMGA2-209ENST00000539662 UBL5Q9BZL1 73 aa5.29□□□□□ -1.56
HMGA2-209ENST00000539662 FSIP2Q5CZC0 6907 aa5.29□□□□□ -1.56
HMGA2-209ENST00000539662 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
HMGA2-209ENST00000539662 HCG22E2RYF7 251 aa5.26□□□□□ -1.57
HMGA2-209ENST00000539662 MT2AP02795 61 aa5.24□□□□□ -1.57
HMGA2-209ENST00000539662 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
HMGA2-209ENST00000539662 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
HMGA2-209ENST00000539662 A0A1B0GV90 55 aa5.22□□□□□ -1.57
HMGA2-209ENST00000539662 MT1FP04733 61 aa5.21□□□□□ -1.58
HMGA2-209ENST00000539662 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
HMGA2-209ENST00000539662 CXCL6P80162 114 aa5.19□□□□□ -1.58
HMGA2-209ENST00000539662 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
HMGA2-209ENST00000539662 C7orf65Q6ZTY9 151 aa5.17□□□□□ -1.58
HMGA2-209ENST00000539662 USH2AO75445 5202 aa5.17□□□□□ -1.58
HMGA2-209ENST00000539662 C4orf26Q17RF5 130 aa5.15□□□□□ -1.59
HMGA2-209ENST00000539662 H1FX-AS1Q4G0G2 97 aa5.14□□□□□ -1.59
HMGA2-209ENST00000539662 FAM240AA0A1B0GVK7 77 aa5.13□□□□□ -1.59
HMGA2-209ENST00000539662 ACYP1P07311 99 aa5.13□□□□□ -1.59
HMGA2-209ENST00000539662 KRTAP10-10P60014 251 aa5.13□□□□□ -1.59
HMGA2-209ENST00000539662 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
HMGA2-209ENST00000539662 KRTAP9-3Q9BYQ3 159 aa5.13□□□□□ -1.59
HMGA2-209ENST00000539662 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
HMGA2-209ENST00000539662 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
HMGA2-209ENST00000539662 A0A087WVE0 104 aa5.09□□□□□ -1.59
HMGA2-209ENST00000539662 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
HMGA2-209ENST00000539662 HIST1H4AP62805 103 aaKnown RBP5.08□□□□□ -1.6
HMGA2-209ENST00000539662 TP53AIP1Q9HCN2 124 aa5.08□□□□□ -1.6
HMGA2-209ENST00000539662 ATP5EP2Q5VTU8 51 aa5.06□□□□□ -1.6
HMGA2-209ENST00000539662 LINC00643Q86TS7 51 aa5.05□□□□□ -1.6
HMGA2-209ENST00000539662 C1orf64Q8NEQ6 169 aa5.04□□□□□ -1.6
HMGA2-209ENST00000539662 CYP4F30PQ9H0H9 118 aa5.04□□□□□ -1.6
HMGA2-209ENST00000539662 TRAV22A0A0B4J277 110 aa5.02□□□□□ -1.61
HMGA2-209ENST00000539662 LCA10Q71F78 164 aa4.99□□□□□ -1.61
HMGA2-209ENST00000539662 H0Y9P7 68 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms