RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 DNAH7Q8WXX0 4024 aa5.75□□□□□ -1.49
CDH13-204ENST00000539548 A0A087X002 238 aa5.74□□□□□ -1.49
CDH13-204ENST00000539548 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
CDH13-204ENST00000539548 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
CDH13-204ENST00000539548 ANAPC11Q9NYG5 84 aa5.73□□□□□ -1.49
CDH13-204ENST00000539548 RTL8CO15255 209 aa5.73□□□□□ -1.49
CDH13-204ENST00000539548 HRES1P13985 223 aa5.73□□□□□ -1.49
CDH13-204ENST00000539548 LCA10Q71F78 164 aa5.73□□□□□ -1.49
CDH13-204ENST00000539548 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
CDH13-204ENST00000539548 A6NED7 52 aa5.72□□□□□ -1.49
CDH13-204ENST00000539548 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
CDH13-204ENST00000539548 CSMD3Q7Z407 3707 aa5.71□□□□□ -1.49
CDH13-204ENST00000539548 PLECQ15149 4684 aaKnown RBP5.71□□□□□ -1.49
CDH13-204ENST00000539548 SEC61GP60059 68 aa5.71□□□□□ -1.5
CDH13-204ENST00000539548 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
CDH13-204ENST00000539548 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
CDH13-204ENST00000539548 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
CDH13-204ENST00000539548 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
CDH13-204ENST00000539548 Q5W150 140 aa5.69□□□□□ -1.5
CDH13-204ENST00000539548 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
CDH13-204ENST00000539548 SPINK6Q6UWN8 80 aa5.67□□□□□ -1.5
CDH13-204ENST00000539548 RYR3Q15413 4870 aa5.67□□□□□ -1.5
CDH13-204ENST00000539548 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
CDH13-204ENST00000539548 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
CDH13-204ENST00000539548 SSBP3-AS1Q7Z2R9 100 aa5.66□□□□□ -1.5
CDH13-204ENST00000539548 HECTD4Q9Y4D8 3996 aa5.65□□□□□ -1.5
CDH13-204ENST00000539548 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
CDH13-204ENST00000539548 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.51
CDH13-204ENST00000539548 DNAH17Q9UFH2 4485 aa5.64□□□□□ -1.51
CDH13-204ENST00000539548 A6NN06 94 aa5.63□□□□□ -1.51
CDH13-204ENST00000539548 ACYP2P14621 99 aa5.63□□□□□ -1.51
CDH13-204ENST00000539548 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
CDH13-204ENST00000539548 SPINK7P58062 85 aa5.62□□□□□ -1.51
CDH13-204ENST00000539548 PRR26Q8N8Z3 221 aa5.62□□□□□ -1.51
CDH13-204ENST00000539548 C1orf134Q5TEV5 83 aa5.6□□□□□ -1.51
CDH13-204ENST00000539548 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
CDH13-204ENST00000539548 LINC00313P59037 77 aa5.59□□□□□ -1.51
CDH13-204ENST00000539548 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
CDH13-204ENST00000539548 STARD9Q9P2P6 4700 aa5.59□□□□□ -1.51
CDH13-204ENST00000539548 FAM229AH3BQW9 127 aa5.59□□□□□ -1.52
CDH13-204ENST00000539548 FRAS1Q86XX4 4008 aa5.57□□□□□ -1.52
CDH13-204ENST00000539548 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
CDH13-204ENST00000539548 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
CDH13-204ENST00000539548 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
CDH13-204ENST00000539548 C7orf65Q6ZTY9 151 aa5.53□□□□□ -1.52
CDH13-204ENST00000539548 KRTAP16-1A8MUX0 517 aa5.52□□□□□ -1.53
CDH13-204ENST00000539548 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
CDH13-204ENST00000539548 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
CDH13-204ENST00000539548 RBM12B-AS1Q9P1G2 102 aa5.52□□□□□ -1.53
CDH13-204ENST00000539548 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
CDH13-204ENST00000539548 A0A1B0GU69 56 aa5.49□□□□□ -1.53
CDH13-204ENST00000539548 LY6G6CO95867 125 aa5.49□□□□□ -1.53
CDH13-204ENST00000539548 Q6ZSA8 131 aa5.48□□□□□ -1.53
CDH13-204ENST00000539548 RYR2Q92736 4967 aa5.47□□□□□ -1.53
CDH13-204ENST00000539548 SACSQ9NZJ4 4579 aa5.47□□□□□ -1.53
CDH13-204ENST00000539548 EPPK1P58107 5090 aaKnown RBP5.47□□□□□ -1.53
CDH13-204ENST00000539548 BIRC6Q9NR09 4857 aa5.46□□□□□ -1.53
CDH13-204ENST00000539548 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.53
CDH13-204ENST00000539548 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.54
CDH13-204ENST00000539548 KRTAP3-3Q9BYR6 98 aa5.46□□□□□ -1.54
CDH13-204ENST00000539548 KRTAP3-2Q9BYR7 98 aa5.46□□□□□ -1.54
CDH13-204ENST00000539548 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.54
CDH13-204ENST00000539548 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
CDH13-204ENST00000539548 KRTAP10-1P60331 282 aa5.45□□□□□ -1.54
CDH13-204ENST00000539548 IGKV2D-30A0A075B6S6 120 aa5.44□□□□□ -1.54
CDH13-204ENST00000539548 DNAH5Q8TE73 4624 aa5.43□□□□□ -1.54
CDH13-204ENST00000539548 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
CDH13-204ENST00000539548 UQCR11O14957 56 aa5.41□□□□□ -1.54
CDH13-204ENST00000539548 MIR22HGQ0VDD5 57 aa5.4□□□□□ -1.54
CDH13-204ENST00000539548 SPINK1P00995 79 aa5.4□□□□□ -1.55
CDH13-204ENST00000539548 PLA2G1BP04054 148 aaKnown RBP5.4□□□□□ -1.55
CDH13-204ENST00000539548 TYMSOSQ8TAI1 123 aa5.39□□□□□ -1.55
CDH13-204ENST00000539548 LRP1BQ9NZR2 4599 aa5.37□□□□□ -1.55
CDH13-204ENST00000539548 PKD1P98161 4303 aa5.37□□□□□ -1.55
CDH13-204ENST00000539548 KRTAP17-1Q9BYP8 105 aa5.35□□□□□ -1.55
CDH13-204ENST00000539548 RPS29P62273 56 aaKnown RBP5.34□□□□□ -1.55
CDH13-204ENST00000539548 HYDINQ4G0P3 5121 aa5.34□□□□□ -1.55
CDH13-204ENST00000539548 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
CDH13-204ENST00000539548 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
CDH13-204ENST00000539548 Q8N1X5 172 aa5.31□□□□□ -1.56
CDH13-204ENST00000539548 LINC00304Q8N9R0 145 aa5.31□□□□□ -1.56
CDH13-204ENST00000539548 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
CDH13-204ENST00000539548 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
CDH13-204ENST00000539548 A8MUU9 505 aa5.26□□□□□ -1.57
CDH13-204ENST00000539548 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
CDH13-204ENST00000539548 RYR1P21817 5038 aa5.25□□□□□ -1.57
CDH13-204ENST00000539548 HERC2O95714 4834 aa5.23□□□□□ -1.57
CDH13-204ENST00000539548 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
CDH13-204ENST00000539548 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
CDH13-204ENST00000539548 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
CDH13-204ENST00000539548 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
CDH13-204ENST00000539548 H0YAA0 97 aa5.19□□□□□ -1.58
CDH13-204ENST00000539548 CSAG1Q6PB30 78 aa5.19□□□□□ -1.58
CDH13-204ENST00000539548 A0A1B0GU33 70 aa5.18□□□□□ -1.58
CDH13-204ENST00000539548 SMR3BP02814 79 aaPredicted RBP5.16□□□□□ -1.58
CDH13-204ENST00000539548 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
CDH13-204ENST00000539548 KIAA1109Q2LD37 5005 aa5.15□□□□□ -1.59
CDH13-204ENST00000539548 KRTAP10-4P60372 401 aaPredicted RBP5.15□□□□□ -1.59
CDH13-204ENST00000539548 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
CDH13-204ENST00000539548 COX6B2Q6YFQ2 88 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms