RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
SLC28A1-204ENST00000538177 C4orf26Q17RF5 130 aa6.66□□□□□ -1.34
SLC28A1-204ENST00000538177 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
SLC28A1-204ENST00000538177 C1orf64Q8NEQ6 169 aa6.66□□□□□ -1.34
SLC28A1-204ENST00000538177 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.34
SLC28A1-204ENST00000538177 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.34
SLC28A1-204ENST00000538177 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
SLC28A1-204ENST00000538177 KRTAP1-4P0C5Y4 121 aa6.64□□□□□ -1.35
SLC28A1-204ENST00000538177 SPANXA2-OT1Q8N9U9 137 aa6.64□□□□□ -1.35
SLC28A1-204ENST00000538177 SACSQ9NZJ4 4579 aa6.63□□□□□ -1.35
SLC28A1-204ENST00000538177 NDUFS5O43920 106 aa6.61□□□□□ -1.35
SLC28A1-204ENST00000538177 PRR4Q16378 134 aa6.61□□□□□ -1.35
SLC28A1-204ENST00000538177 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
SLC28A1-204ENST00000538177 C8orf87E5RJ46 101 aa6.59□□□□□ -1.35
SLC28A1-204ENST00000538177 LINC00336Q6ZUF6 198 aa6.59□□□□□ -1.35
SLC28A1-204ENST00000538177 C1orf195Q5TG92 126 aa6.58□□□□□ -1.36
SLC28A1-204ENST00000538177 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
SLC28A1-204ENST00000538177 IGLV7-46A0A075B6I9 117 aa6.55□□□□□ -1.36
SLC28A1-204ENST00000538177 LIMD2Q9BT23 127 aa6.55□□□□□ -1.36
SLC28A1-204ENST00000538177 KRTAP13-3Q3SY46 172 aa6.54□□□□□ -1.36
SLC28A1-204ENST00000538177 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
SLC28A1-204ENST00000538177 LINC00313P59037 77 aa6.54□□□□□ -1.36
SLC28A1-204ENST00000538177 DYNC1H1Q14204 4646 aaKnown RBP6.54□□□□□ -1.36
SLC28A1-204ENST00000538177 Q5W150 140 aa6.53□□□□□ -1.36
SLC28A1-204ENST00000538177 MPLKIPQ8TAP9 179 aa6.53□□□□□ -1.36
SLC28A1-204ENST00000538177 PKHD1P08F94 4074 aa6.53□□□□□ -1.36
SLC28A1-204ENST00000538177 PCOTHQ58A44 107 aa6.52□□□□□ -1.36
SLC28A1-204ENST00000538177 TYMSOSQ8TAI1 123 aa6.52□□□□□ -1.36
SLC28A1-204ENST00000538177 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
SLC28A1-204ENST00000538177 C4orf48Q5BLP8 95 aa6.51□□□□□ -1.37
SLC28A1-204ENST00000538177 SPINK1P00995 79 aa6.51□□□□□ -1.37
SLC28A1-204ENST00000538177 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
SLC28A1-204ENST00000538177 Q1T7F1 81 aa6.5□□□□□ -1.37
SLC28A1-204ENST00000538177 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
SLC28A1-204ENST00000538177 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
SLC28A1-204ENST00000538177 SMR3BP02814 79 aaPredicted RBP6.46□□□□□ -1.38
SLC28A1-204ENST00000538177 PRR26Q8N8Z3 221 aa6.46□□□□□ -1.38
SLC28A1-204ENST00000538177 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
SLC28A1-204ENST00000538177 COA5Q86WW8 74 aa6.45□□□□□ -1.38
SLC28A1-204ENST00000538177 RYR2Q92736 4967 aa6.45□□□□□ -1.38
SLC28A1-204ENST00000538177 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
SLC28A1-204ENST00000538177 SPAG11AQ6PDA7 123 aa6.44□□□□□ -1.38
SLC28A1-204ENST00000538177 LINC00304Q8N9R0 145 aa6.44□□□□□ -1.38
SLC28A1-204ENST00000538177 APOBP04114 4563 aaKnown RBP6.44□□□□□ -1.38
SLC28A1-204ENST00000538177 V9GYY9 64 aa6.43□□□□□ -1.38
SLC28A1-204ENST00000538177 FAT1Q14517 4588 aa6.41□□□□□ -1.38
SLC28A1-204ENST00000538177 IGKV2-30P06310 120 aa6.4□□□□□ -1.39
SLC28A1-204ENST00000538177 HRES1P13985 223 aa6.39□□□□□ -1.39
SLC28A1-204ENST00000538177 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
SLC28A1-204ENST00000538177 RETNLBQ9BQ08 111 aa6.38□□□□□ -1.39
SLC28A1-204ENST00000538177 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
SLC28A1-204ENST00000538177 PSPHP1O15172 72 aa6.37□□□□□ -1.39
SLC28A1-204ENST00000538177 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
SLC28A1-204ENST00000538177 A8MUN3 132 aa6.35□□□□□ -1.39
SLC28A1-204ENST00000538177 BRK1Q8WUW1 75 aa6.34□□□□□ -1.4
SLC28A1-204ENST00000538177 ACYP2P14621 99 aa6.33□□□□□ -1.4
SLC28A1-204ENST00000538177 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
SLC28A1-204ENST00000538177 Q5VV11 94 aa6.32□□□□□ -1.4
SLC28A1-204ENST00000538177 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
SLC28A1-204ENST00000538177 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
SLC28A1-204ENST00000538177 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
SLC28A1-204ENST00000538177 RYR3Q15413 4870 aa6.28□□□□□ -1.4
SLC28A1-204ENST00000538177 Q75L30 129 aa6.25□□□□□ -1.41
SLC28A1-204ENST00000538177 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
SLC28A1-204ENST00000538177 A8MUU9 505 aa6.25□□□□□ -1.41
SLC28A1-204ENST00000538177 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
SLC28A1-204ENST00000538177 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
SLC28A1-204ENST00000538177 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
SLC28A1-204ENST00000538177 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
SLC28A1-204ENST00000538177 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
SLC28A1-204ENST00000538177 Q8N1X5 172 aa6.2□□□□□ -1.42
SLC28A1-204ENST00000538177 Q5VSD8 79 aa6.19□□□□□ -1.42
SLC28A1-204ENST00000538177 HSPG2P98160 4391 aa6.19□□□□□ -1.42
SLC28A1-204ENST00000538177 RYR1P21817 5038 aa6.17□□□□□ -1.42
SLC28A1-204ENST00000538177 TNXBP22105 4242 aa6.16□□□□□ -1.42
SLC28A1-204ENST00000538177 A6NED7 52 aa6.16□□□□□ -1.42
SLC28A1-204ENST00000538177 LRP1Q07954 4544 aaKnown RBP6.14□□□□□ -1.43
SLC28A1-204ENST00000538177 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
SLC28A1-204ENST00000538177 A8MU10 97 aa6.14□□□□□ -1.43
SLC28A1-204ENST00000538177 LCA10Q71F78 164 aa6.13□□□□□ -1.43
SLC28A1-204ENST00000538177 SPINK7P58062 85 aa6.11□□□□□ -1.43
SLC28A1-204ENST00000538177 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
SLC28A1-204ENST00000538177 CDC42SE1Q9NRR8 79 aa6.1□□□□□ -1.43
SLC28A1-204ENST00000538177 A0A1B0GU69 56 aa6.08□□□□□ -1.44
SLC28A1-204ENST00000538177 DMBT1Q9UGM3 2413 aaPredicted RBP6.07□□□□□ -1.44
SLC28A1-204ENST00000538177 EPPK1P58107 5090 aaKnown RBP6.06□□□□□ -1.44
SLC28A1-204ENST00000538177 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
SLC28A1-204ENST00000538177 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
SLC28A1-204ENST00000538177 KIAA1109Q2LD37 5005 aa6.04□□□□□ -1.44
SLC28A1-204ENST00000538177 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
SLC28A1-204ENST00000538177 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
SLC28A1-204ENST00000538177 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
SLC28A1-204ENST00000538177 PMAIP1Q13794 54 aa6□□□□□ -1.45
SLC28A1-204ENST00000538177 XP32Q5T750 250 aa5.99□□□□□ -1.45
SLC28A1-204ENST00000538177 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
SLC28A1-204ENST00000538177 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
SLC28A1-204ENST00000538177 UQCR11O14957 56 aa5.96□□□□□ -1.46
SLC28A1-204ENST00000538177 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
SLC28A1-204ENST00000538177 A6NN06 94 aa5.94□□□□□ -1.46
SLC28A1-204ENST00000538177 SEC61GP60059 68 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms