RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
CLIP1-210ENST00000538120 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
CLIP1-210ENST00000538120 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
CLIP1-210ENST00000538120 A0A1B0GW54 56 aa6.59□□□□□ -1.35
CLIP1-210ENST00000538120 PRR4Q16378 134 aa6.59□□□□□ -1.35
CLIP1-210ENST00000538120 Q1T7F1 81 aa6.59□□□□□ -1.35
CLIP1-210ENST00000538120 ZCCHC13Q8WW36 166 aaKnown RBP6.59□□□□□ -1.35
CLIP1-210ENST00000538120 DNAH5Q8TE73 4624 aa6.59□□□□□ -1.35
CLIP1-210ENST00000538120 HYDINQ4G0P3 5121 aa6.58□□□□□ -1.36
CLIP1-210ENST00000538120 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
CLIP1-210ENST00000538120 C1orf64Q8NEQ6 169 aa6.58□□□□□ -1.36
CLIP1-210ENST00000538120 IGLV5-52A0A0A0MRZ9 124 aa6.58□□□□□ -1.36
CLIP1-210ENST00000538120 UBE2AP49459 152 aa6.58□□□□□ -1.36
CLIP1-210ENST00000538120 SPRR1BP22528 89 aa6.57□□□□□ -1.36
CLIP1-210ENST00000538120 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
CLIP1-210ENST00000538120 PLAC8Q9NZF1 115 aa6.57□□□□□ -1.36
CLIP1-210ENST00000538120 IGLV8-61A0A075B6I0 122 aa6.57□□□□□ -1.36
CLIP1-210ENST00000538120 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
CLIP1-210ENST00000538120 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
CLIP1-210ENST00000538120 PSPHP1O15172 72 aa6.56□□□□□ -1.36
CLIP1-210ENST00000538120 WFDC13Q8IUB5 93 aa6.56□□□□□ -1.36
CLIP1-210ENST00000538120 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
CLIP1-210ENST00000538120 A6NN06 94 aa6.55□□□□□ -1.36
CLIP1-210ENST00000538120 FAT2Q9NYQ8 4349 aa6.55□□□□□ -1.36
CLIP1-210ENST00000538120 A0A087WSZ3 146 aa6.54□□□□□ -1.36
CLIP1-210ENST00000538120 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
CLIP1-210ENST00000538120 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
CLIP1-210ENST00000538120 PKD1P98161 4303 aa6.53□□□□□ -1.36
CLIP1-210ENST00000538120 PSORS1C2Q9UIG4 136 aa6.53□□□□□ -1.36
CLIP1-210ENST00000538120 LINC01554Q52M75 96 aa6.52□□□□□ -1.37
CLIP1-210ENST00000538120 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
CLIP1-210ENST00000538120 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
CLIP1-210ENST00000538120 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
CLIP1-210ENST00000538120 SACSQ9NZJ4 4579 aa6.48□□□□□ -1.37
CLIP1-210ENST00000538120 LINC00483Q53H64 154 aa6.48□□□□□ -1.37
CLIP1-210ENST00000538120 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
CLIP1-210ENST00000538120 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
CLIP1-210ENST00000538120 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
CLIP1-210ENST00000538120 ZNF861PO60384 105 aa6.47□□□□□ -1.37
CLIP1-210ENST00000538120 NOTCH2NLQ7Z3S9 236 aa6.46□□□□□ -1.38
CLIP1-210ENST00000538120 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
CLIP1-210ENST00000538120 KRTAP10-1P60331 282 aa6.45□□□□□ -1.38
CLIP1-210ENST00000538120 Q6ZSA8 131 aa6.44□□□□□ -1.38
CLIP1-210ENST00000538120 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
CLIP1-210ENST00000538120 CASC2Q6XLA1 102 aa6.43□□□□□ -1.38
CLIP1-210ENST00000538120 H0Y9P7 68 aa6.43□□□□□ -1.38
CLIP1-210ENST00000538120 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
CLIP1-210ENST00000538120 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
CLIP1-210ENST00000538120 NDUFB1O75438 58 aa6.42□□□□□ -1.38
CLIP1-210ENST00000538120 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
CLIP1-210ENST00000538120 A8MU10 97 aa6.42□□□□□ -1.38
CLIP1-210ENST00000538120 LINC00472Q9H8W2 130 aa6.41□□□□□ -1.38
CLIP1-210ENST00000538120 A8MWP4 228 aa6.39□□□□□ -1.39
CLIP1-210ENST00000538120 MOBPQ13875 183 aa6.37□□□□□ -1.39
CLIP1-210ENST00000538120 Q5VV11 94 aa6.37□□□□□ -1.39
CLIP1-210ENST00000538120 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
CLIP1-210ENST00000538120 Q8N9P0 234 aaPredicted RBP6.35□□□□□ -1.39
CLIP1-210ENST00000538120 SPANXA2-OT1Q8N9U9 137 aa6.35□□□□□ -1.39
CLIP1-210ENST00000538120 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
CLIP1-210ENST00000538120 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
CLIP1-210ENST00000538120 Q96NJ1 140 aa6.34□□□□□ -1.39
CLIP1-210ENST00000538120 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
CLIP1-210ENST00000538120 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
CLIP1-210ENST00000538120 H3BPC8 53 aa6.33□□□□□ -1.4
CLIP1-210ENST00000538120 PCOTHQ58A44 107 aa6.33□□□□□ -1.4
CLIP1-210ENST00000538120 RYR2Q92736 4967 aa6.32□□□□□ -1.4
CLIP1-210ENST00000538120 PKHD1P08F94 4074 aa6.32□□□□□ -1.4
CLIP1-210ENST00000538120 ASB16-AS1Q495Z4 193 aa6.32□□□□□ -1.4
CLIP1-210ENST00000538120 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
CLIP1-210ENST00000538120 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
CLIP1-210ENST00000538120 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
CLIP1-210ENST00000538120 COA5Q86WW8 74 aa6.3□□□□□ -1.4
CLIP1-210ENST00000538120 A0A087X002 238 aa6.3□□□□□ -1.4
CLIP1-210ENST00000538120 PRAC1Q96KF2 57 aa6.3□□□□□ -1.4
CLIP1-210ENST00000538120 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
CLIP1-210ENST00000538120 A0A1B0GVY2 172 aa6.28□□□□□ -1.4
CLIP1-210ENST00000538120 CDC42SE1Q9NRR8 79 aa6.28□□□□□ -1.4
CLIP1-210ENST00000538120 KRTAP13-2Q52LG2 175 aa6.27□□□□□ -1.4
CLIP1-210ENST00000538120 LIMD2Q9BT23 127 aa6.27□□□□□ -1.4
CLIP1-210ENST00000538120 SSBP3-AS1Q7Z2R9 100 aa6.27□□□□□ -1.41
CLIP1-210ENST00000538120 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
CLIP1-210ENST00000538120 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
CLIP1-210ENST00000538120 C8orf17Q9NRJ1 99 aa6.25□□□□□ -1.41
CLIP1-210ENST00000538120 KMT2CQ8NEZ4 4911 aaKnown RBP6.25□□□□□ -1.41
CLIP1-210ENST00000538120 APOBP04114 4563 aaKnown RBP6.25□□□□□ -1.41
CLIP1-210ENST00000538120 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
CLIP1-210ENST00000538120 SPAG11AQ6PDA7 123 aa6.22□□□□□ -1.41
CLIP1-210ENST00000538120 Q8N1X5 172 aa6.22□□□□□ -1.41
CLIP1-210ENST00000538120 A6NED7 52 aa6.21□□□□□ -1.41
CLIP1-210ENST00000538120 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.41
CLIP1-210ENST00000538120 LOC101927531A0A1B0GV80 90 aa6.21□□□□□ -1.42
CLIP1-210ENST00000538120 A0A1B0GVX0 72 aa6.21□□□□□ -1.42
CLIP1-210ENST00000538120 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
CLIP1-210ENST00000538120 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
CLIP1-210ENST00000538120 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
CLIP1-210ENST00000538120 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
CLIP1-210ENST00000538120 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
CLIP1-210ENST00000538120 HRES1P13985 223 aa6.19□□□□□ -1.42
CLIP1-210ENST00000538120 FAT1Q14517 4588 aa6.19□□□□□ -1.42
CLIP1-210ENST00000538120 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms