RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ZZEF1O43149 2961 aa6.29□□□□□ -1.4
LINC00346-201ENST00000538077 DSPP15924 2871 aaKnown RBP6.27□□□□□ -1.41
LINC00346-201ENST00000538077 A6NN06 94 aa6.27□□□□□ -1.41
LINC00346-201ENST00000538077 ANK3Q12955 4377 aaKnown RBP6.27□□□□□ -1.41
LINC00346-201ENST00000538077 A0A1B0GVY2 172 aa6.25□□□□□ -1.41
LINC00346-201ENST00000538077 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
LINC00346-201ENST00000538077 ZNF292O60281 2723 aa6.24□□□□□ -1.41
LINC00346-201ENST00000538077 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
LINC00346-201ENST00000538077 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
LINC00346-201ENST00000538077 ADGRG4Q8IZF6 3080 aa6.18□□□□□ -1.42
LINC00346-201ENST00000538077 KALRNO60229 2985 aa6.18□□□□□ -1.42
LINC00346-201ENST00000538077 TEX15Q9BXT5 2789 aa6.17□□□□□ -1.42
LINC00346-201ENST00000538077 CSMD2Q7Z408 3487 aa6.17□□□□□ -1.42
LINC00346-201ENST00000538077 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
LINC00346-201ENST00000538077 CUBNO60494 3623 aa6.13□□□□□ -1.43
LINC00346-201ENST00000538077 CHD6Q8TD26 2715 aa6.13□□□□□ -1.43
LINC00346-201ENST00000538077 HRNRQ86YZ3 2850 aaPredicted RBP6.11□□□□□ -1.43
LINC00346-201ENST00000538077 BAHCC1Q9P281 2608 aa6.1□□□□□ -1.43
LINC00346-201ENST00000538077 TEP1Q99973 2627 aaKnown RBP6.08□□□□□ -1.44
LINC00346-201ENST00000538077 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
LINC00346-201ENST00000538077 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
LINC00346-201ENST00000538077 CENPEQ02224 2701 aa6.06□□□□□ -1.44
LINC00346-201ENST00000538077 TNP1P09430 55 aa6.06□□□□□ -1.44
LINC00346-201ENST00000538077 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
LINC00346-201ENST00000538077 IGSF10Q6WRI0 2623 aa6.05□□□□□ -1.44
LINC00346-201ENST00000538077 GCN1Q92616 2671 aaKnown RBP6.04□□□□□ -1.44
LINC00346-201ENST00000538077 XP32Q5T750 250 aa6.03□□□□□ -1.44
LINC00346-201ENST00000538077 UTP20O75691 2785 aaKnown RBP6.03□□□□□ -1.44
LINC00346-201ENST00000538077 NBEAQ8NFP9 2946 aa6.03□□□□□ -1.44
LINC00346-201ENST00000538077 NBEAL1Q6ZS30 2694 aa6.03□□□□□ -1.44
LINC00346-201ENST00000538077 NBEAL2Q6ZNJ1 2754 aa6.01□□□□□ -1.45
LINC00346-201ENST00000538077 ZNF469Q96JG9 3925 aaPredicted RBP6.01□□□□□ -1.45
LINC00346-201ENST00000538077 COL12A1Q99715 3063 aa6□□□□□ -1.45
LINC00346-201ENST00000538077 CRYBG3Q68DQ2 2970 aa5.99□□□□□ -1.45
LINC00346-201ENST00000538077 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
LINC00346-201ENST00000538077 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.46
LINC00346-201ENST00000538077 CMYA5Q8N3K9 4069 aa5.95□□□□□ -1.46
LINC00346-201ENST00000538077 TACC2O95359 2948 aa5.95□□□□□ -1.46
LINC00346-201ENST00000538077 DCHS2Q6V1P9 2916 aa5.95□□□□□ -1.46
LINC00346-201ENST00000538077 ITPR2Q14571 2701 aa5.94□□□□□ -1.46
LINC00346-201ENST00000538077 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
LINC00346-201ENST00000538077 STAB1Q9NY15 2570 aa5.94□□□□□ -1.46
LINC00346-201ENST00000538077 COL6A5A8TX70 2615 aa5.93□□□□□ -1.46
LINC00346-201ENST00000538077 UNC79Q9P2D8 2635 aa5.92□□□□□ -1.46
LINC00346-201ENST00000538077 FBN2P35556 2912 aa5.91□□□□□ -1.46
LINC00346-201ENST00000538077 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.46
LINC00346-201ENST00000538077 CELSR1Q9NYQ6 3014 aa5.87□□□□□ -1.47
LINC00346-201ENST00000538077 HUWE1Q7Z6Z7 4374 aaKnown RBP5.86□□□□□ -1.47
LINC00346-201ENST00000538077 ITPR1Q14643 2758 aa5.84□□□□□ -1.48
LINC00346-201ENST00000538077 ANK2Q01484 3957 aa5.83□□□□□ -1.48
LINC00346-201ENST00000538077 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
LINC00346-201ENST00000538077 MAP1AP78559 2803 aaPredicted RBP5.82□□□□□ -1.48
LINC00346-201ENST00000538077 NOTCH1P46531 2555 aa5.81□□□□□ -1.48
LINC00346-201ENST00000538077 CELSR2Q9HCU4 2923 aa5.81□□□□□ -1.48
LINC00346-201ENST00000538077 UBR5O95071 2799 aaPredicted RBP5.8□□□□□ -1.48
LINC00346-201ENST00000538077 KMT2BQ9UMN6 2715 aaPredicted RBP5.78□□□□□ -1.48
LINC00346-201ENST00000538077 ASH1LQ9NR48 2969 aaKnown RBP5.78□□□□□ -1.48
LINC00346-201ENST00000538077 H0YAA0 97 aa5.77□□□□□ -1.49
LINC00346-201ENST00000538077 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
LINC00346-201ENST00000538077 APCP25054 2843 aa5.75□□□□□ -1.49
LINC00346-201ENST00000538077 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
LINC00346-201ENST00000538077 HIVEP1P15822 2718 aa5.74□□□□□ -1.49
LINC00346-201ENST00000538077 NSD1Q96L73 2696 aaPredicted RBP5.72□□□□□ -1.49
LINC00346-201ENST00000538077 PDZD2O15018 2839 aa5.72□□□□□ -1.49
LINC00346-201ENST00000538077 P0C880 135 aa5.72□□□□□ -1.49
LINC00346-201ENST00000538077 TRRAPQ9Y4A5 3859 aa5.7□□□□□ -1.5
LINC00346-201ENST00000538077 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
LINC00346-201ENST00000538077 TENM4Q6N022 2769 aa5.67□□□□□ -1.5
LINC00346-201ENST00000538077 STAB2Q8WWQ8 2551 aa5.67□□□□□ -1.5
LINC00346-201ENST00000538077 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
LINC00346-201ENST00000538077 FLNCQ14315 2725 aa5.6□□□□□ -1.51
LINC00346-201ENST00000538077 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
LINC00346-201ENST00000538077 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
LINC00346-201ENST00000538077 DNAH9Q9NYC9 4486 aa5.53□□□□□ -1.52
LINC00346-201ENST00000538077 ZANQ9Y493 2812 aa5.52□□□□□ -1.53
LINC00346-201ENST00000538077 DNAH1Q9P2D7 4330 aa5.47□□□□□ -1.53
LINC00346-201ENST00000538077 LYSTQ99698 3801 aa5.47□□□□□ -1.53
LINC00346-201ENST00000538077 TENM2Q9NT68 2774 aa5.45□□□□□ -1.54
LINC00346-201ENST00000538077 FBN1P35555 2871 aaKnown RBP5.45□□□□□ -1.54
LINC00346-201ENST00000538077 OTOGQ6ZRI0 2925 aa5.44□□□□□ -1.54
LINC00346-201ENST00000538077 DNAH10Q8IVF4 4471 aa5.41□□□□□ -1.54
LINC00346-201ENST00000538077 NIPBLQ6KC79 2804 aaeCLIP5.4□□□□□ -1.55
LINC00346-201ENST00000538077 MXRA5Q9NR99 2828 aa5.4□□□□□ -1.55
LINC00346-201ENST00000538077 FRAS1Q86XX4 4008 aa5.38□□□□□ -1.55
LINC00346-201ENST00000538077 DNAH7Q8WXX0 4024 aa5.34□□□□□ -1.56
LINC00346-201ENST00000538077 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
LINC00346-201ENST00000538077 CSMD3Q7Z407 3707 aa5.33□□□□□ -1.56
LINC00346-201ENST00000538077 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
LINC00346-201ENST00000538077 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
LINC00346-201ENST00000538077 DNAH6Q9C0G6 4158 aa5.31□□□□□ -1.56
LINC00346-201ENST00000538077 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
LINC00346-201ENST00000538077 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
LINC00346-201ENST00000538077 NF1P21359 2839 aa5.3□□□□□ -1.56
LINC00346-201ENST00000538077 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
LINC00346-201ENST00000538077 KMT2AQ03164 3969 aa5.29□□□□□ -1.56
LINC00346-201ENST00000538077 TENM1Q9UKZ4 2725 aa5.28□□□□□ -1.56
LINC00346-201ENST00000538077 PRKDCP78527 4128 aaKnown RBP5.28□□□□□ -1.56
LINC00346-201ENST00000538077 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
LINC00346-201ENST00000538077 TGP01266 2768 aa5.22□□□□□ -1.57
LINC00346-201ENST00000538077 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms