RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
CIT-208ENST00000537607 KRTAP7-1Q8IUC3 87 aa7.2□□□□□ -1.26
CIT-208ENST00000537607 M0R2T5 61 aa7.19□□□□□ -1.26
CIT-208ENST00000537607 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
CIT-208ENST00000537607 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
CIT-208ENST00000537607 S4R3F8 94 aa7.16□□□□□ -1.26
CIT-208ENST00000537607 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
CIT-208ENST00000537607 Q5VV11 94 aa7.15□□□□□ -1.27
CIT-208ENST00000537607 OXTP01178 125 aa7.15□□□□□ -1.27
CIT-208ENST00000537607 DCHS1Q96JQ0 3298 aa7.13□□□□□ -1.27
CIT-208ENST00000537607 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
CIT-208ENST00000537607 MXRA5Q9NR99 2828 aa7.12□□□□□ -1.27
CIT-208ENST00000537607 TENM1Q9UKZ4 2725 aa7.11□□□□□ -1.27
CIT-208ENST00000537607 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
CIT-208ENST00000537607 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
CIT-208ENST00000537607 R4GN34 69 aa7.06□□□□□ -1.28
CIT-208ENST00000537607 RELNP78509 3460 aa7.06□□□□□ -1.28
CIT-208ENST00000537607 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
CIT-208ENST00000537607 PKD1L1Q8TDX9 2849 aa7.03□□□□□ -1.28
CIT-208ENST00000537607 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
CIT-208ENST00000537607 CELSR1Q9NYQ6 3014 aa7.02□□□□□ -1.29
CIT-208ENST00000537607 LUZP6Q538Z0 58 aa7.02□□□□□ -1.29
CIT-208ENST00000537607 ASB16-AS1Q495Z4 193 aa7□□□□□ -1.29
CIT-208ENST00000537607 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
CIT-208ENST00000537607 WDFY3Q8IZQ1 3526 aa6.94□□□□□ -1.3
CIT-208ENST00000537607 TENM2Q9NT68 2774 aa6.94□□□□□ -1.3
CIT-208ENST00000537607 M0QZ58 72 aa6.93□□□□□ -1.3
CIT-208ENST00000537607 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
CIT-208ENST00000537607 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
CIT-208ENST00000537607 SPATA8Q6RVD6 105 aa6.92□□□□□ -1.3
CIT-208ENST00000537607 KRTAP21-3Q3LHN1 58 aa6.9□□□□□ -1.3
CIT-208ENST00000537607 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
CIT-208ENST00000537607 VWFP04275 2813 aa6.87□□□□□ -1.31
CIT-208ENST00000537607 LAMA5O15230 3695 aa6.87□□□□□ -1.31
CIT-208ENST00000537607 PDZD2O15018 2839 aa6.85□□□□□ -1.31
CIT-208ENST00000537607 ASPMQ8IZT6 3477 aa6.84□□□□□ -1.31
CIT-208ENST00000537607 FBN1P35555 2871 aaKnown RBP6.84□□□□□ -1.31
CIT-208ENST00000537607 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
CIT-208ENST00000537607 ROMO1P60602 79 aa6.83□□□□□ -1.32
CIT-208ENST00000537607 TGP01266 2768 aa6.83□□□□□ -1.32
CIT-208ENST00000537607 ZFHX4Q86UP3 3567 aa6.76□□□□□ -1.33
CIT-208ENST00000537607 A8MU10 97 aa6.75□□□□□ -1.33
CIT-208ENST00000537607 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
CIT-208ENST00000537607 OTOGQ6ZRI0 2925 aa6.72□□□□□ -1.33
CIT-208ENST00000537607 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.34
CIT-208ENST00000537607 A8MUU9 505 aa6.71□□□□□ -1.34
CIT-208ENST00000537607 H3BS24 57 aa6.69□□□□□ -1.34
CIT-208ENST00000537607 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
CIT-208ENST00000537607 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
CIT-208ENST00000537607 DMDP11532 3685 aa6.64□□□□□ -1.35
CIT-208ENST00000537607 ZFHX3Q15911 3703 aa6.62□□□□□ -1.35
CIT-208ENST00000537607 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
CIT-208ENST00000537607 A6NN06 94 aa6.61□□□□□ -1.35
CIT-208ENST00000537607 XP32Q5T750 250 aa6.58□□□□□ -1.36
CIT-208ENST00000537607 NBPF19A0A087WUL8 3843 aa6.57□□□□□ -1.36
CIT-208ENST00000537607 CSMD1Q96PZ7 3565 aa6.56□□□□□ -1.36
CIT-208ENST00000537607 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
CIT-208ENST00000537607 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
CIT-208ENST00000537607 CUBNO60494 3623 aa6.49□□□□□ -1.37
CIT-208ENST00000537607 KRTAP16-1A8MUX0 517 aa6.49□□□□□ -1.37
CIT-208ENST00000537607 FBN3Q75N90 2809 aa6.45□□□□□ -1.38
CIT-208ENST00000537607 CSMD2Q7Z408 3487 aa6.44□□□□□ -1.38
CIT-208ENST00000537607 SVEP1Q4LDE5 3571 aa6.43□□□□□ -1.38
CIT-208ENST00000537607 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
CIT-208ENST00000537607 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
CIT-208ENST00000537607 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
CIT-208ENST00000537607 TNP1P09430 55 aa6.37□□□□□ -1.39
CIT-208ENST00000537607 COL7A1Q02388 2944 aa6.35□□□□□ -1.39
CIT-208ENST00000537607 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
CIT-208ENST00000537607 H0YAA0 97 aa6.34□□□□□ -1.39
CIT-208ENST00000537607 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
CIT-208ENST00000537607 P0C880 135 aa6.28□□□□□ -1.4
CIT-208ENST00000537607 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
CIT-208ENST00000537607 MEGF8Q7Z7M0 2845 aa6.28□□□□□ -1.4
CIT-208ENST00000537607 SPENQ96T58 3664 aaKnown RBP6.25□□□□□ -1.41
CIT-208ENST00000537607 TRRAPQ9Y4A5 3859 aa6.24□□□□□ -1.41
CIT-208ENST00000537607 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
CIT-208ENST00000537607 ANK3Q12955 4377 aaKnown RBP6.17□□□□□ -1.42
CIT-208ENST00000537607 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
CIT-208ENST00000537607 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
CIT-208ENST00000537607 BSNQ9UPA5 3926 aa6□□□□□ -1.45
CIT-208ENST00000537607 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
CIT-208ENST00000537607 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
CIT-208ENST00000537607 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
CIT-208ENST00000537607 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
CIT-208ENST00000537607 VPS13CQ709C8 3753 aa5.83□□□□□ -1.48
CIT-208ENST00000537607 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
CIT-208ENST00000537607 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
CIT-208ENST00000537607 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
CIT-208ENST00000537607 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
CIT-208ENST00000537607 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
CIT-208ENST00000537607 CSMD3Q7Z407 3707 aa5.7□□□□□ -1.5
CIT-208ENST00000537607 ZNF469Q96JG9 3925 aaPredicted RBP5.68□□□□□ -1.5
CIT-208ENST00000537607 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.5
CIT-208ENST00000537607 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
CIT-208ENST00000537607 DNHD1Q96M86 4753 aa5.57□□□□□ -1.52
CIT-208ENST00000537607 DNAH5Q8TE73 4624 aa5.53□□□□□ -1.52
CIT-208ENST00000537607 DNAH9Q9NYC9 4486 aa5.52□□□□□ -1.53
CIT-208ENST00000537607 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
CIT-208ENST00000537607 AKAP9Q99996 3911 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms