RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 EFCAB5A4FU69 1503 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 SPRR1AP35321 89 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 SPINK6Q6UWN8 80 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 RICTORQ6R327 1708 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 FAT3Q8TDW7 4589 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 USH2AO75445 5202 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 TACC2O95359 2948 aa0.71□□□□□ -2.3
SRGAP1-203ENST00000537585 ATP7AQ04656 1500 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 MYO5CQ9NQX4 1742 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 CMYA5Q8N3K9 4069 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 NDUFA3O95167 84 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 DEFB109BQ30KR1 87 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 H1FX-AS1Q4G0G2 97 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 LELP1Q5T871 98 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 SMIM5Q71RC9 77 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 CACNA1CQ13936 2221 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 MROH1Q8NDA8 1641 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 MUC5ACP98088 5654 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 ADAMTS12P58397 1594 aa0.7□□□□□ -2.3
SRGAP1-203ENST00000537585 FRAS1Q86XX4 4008 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 UBR3Q6ZT12 1888 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 ABCA5Q8WWZ7 1642 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 CCL22O00626 93 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 SFTA3P0C7M3 94 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 C3orf79P0CE67 100 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 HMGA1P17096 107 aaKnown RBP0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 UBL5Q9BZL1 73 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 SPTBN1Q01082 2364 aaKnown RBP0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 MYCBP2O75592 4640 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 LMTK2Q8IWU2 1503 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 ZNF831Q5JPB2 1677 aa0.69□□□□□ -2.3
SRGAP1-203ENST00000537585 SRRM2Q9UQ35 2752 aaKnown RBP0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 AHCTF1Q8WYP5 2266 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 DYNC1H1Q14204 4646 aaKnown RBP0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 ABCA6Q8N139 1617 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 HFM1A2PYH4 1435 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 LINC01549A6NIU2 74 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 SPINK1P00995 79 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 FCER1GP30273 86 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 TJP1Q07157 1748 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 LYSTQ99698 3801 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 CDKN2A-AS1Q9UH64 79 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 URB1O60287 2271 aaKnown RBP0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 PKHD1P08F94 4074 aa0.68□□□□□ -2.3
SRGAP1-203ENST00000537585 ABCC8Q09428 1581 aa0.67□□□□□ -2.3
SRGAP1-203ENST00000537585 KIF20BQ96Q89 1820 aa0.67□□□□□ -2.3
SRGAP1-203ENST00000537585 A0A087WWC5 75 aa0.67□□□□□ -2.3
SRGAP1-203ENST00000537585 AGLP35573 1532 aa0.67□□□□□ -2.3
SRGAP1-203ENST00000537585 DNAH7Q8WXX0 4024 aa0.67□□□□□ -2.3
SRGAP1-203ENST00000537585 PLCH1Q4KWH8 1693 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 MDN1Q9NU22 5596 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 LOC730098B7Z3J9 87 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 SPINK4O60575 86 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 PLECQ15149 4684 aaKnown RBP0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 Q5VSD8 79 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 WFDC13Q8IUB5 93 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 PTPN23Q9H3S7 1636 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 LRRC37AA6NMS7 1700 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 ITSN1Q15811 1721 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 LRP2P98164 4655 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 ANKRD36A6QL64 1941 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
SRGAP1-203ENST00000537585 LRP1BQ9NZR2 4599 aa0.65□□□□□ -2.3
SRGAP1-203ENST00000537585 MROH2AA6NES4 1674 aa0.65□□□□□ -2.3
SRGAP1-203ENST00000537585 LTN1O94822 1766 aa0.65□□□□□ -2.3
SRGAP1-203ENST00000537585 ERICH3Q5RHP9 1530 aa0.65□□□□□ -2.31
SRGAP1-203ENST00000537585 HSPG2P98160 4391 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 PLCE1Q9P212 2302 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 LINC00158P58513 81 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 NHSQ6T4R5 1651 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 RGPD8O14715 1765 aaPredicted RBP0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 RGPD5Q99666 1765 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 PKD1P98161 4303 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 USF3Q68DE3 2245 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 TIAM2Q8IVF5 1701 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 FAT1Q14517 4588 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 ANKRD50Q9ULJ7 1429 aa0.64□□□□□ -2.31
SRGAP1-203ENST00000537585 CDC42BPGQ6DT37 1551 aa0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 LCE6AA0A183 80 aa0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 NRAPQ86VF7 1730 aa0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 FAT2Q9NYQ8 4349 aa0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
SRGAP1-203ENST00000537585 CD163L1Q9NR16 1453 aa0.62□□□□□ -2.31
SRGAP1-203ENST00000537585 QSER1Q2KHR3 1735 aa0.62□□□□□ -2.31
SRGAP1-203ENST00000537585 ETDCA0A1B0GVM5 59 aa0.62□□□□□ -2.31
SRGAP1-203ENST00000537585 CLTCL1P53675 1640 aa0.62□□□□□ -2.31
SRGAP1-203ENST00000537585 ABCA9Q8IUA7 1624 aa0.62□□□□□ -2.31
SRGAP1-203ENST00000537585 COL14A1Q05707 1796 aaKnown RBP0.62□□□□□ -2.31
SRGAP1-203ENST00000537585 ALMS1Q8TCU4 4167 aa0.62□□□□□ -2.31
SRGAP1-203ENST00000537585 ACACAQ13085 2346 aa0.61□□□□□ -2.31
SRGAP1-203ENST00000537585 DOT1LQ8TEK3 1739 aa0.61□□□□□ -2.31
SRGAP1-203ENST00000537585 ANK3Q12955 4377 aaKnown RBP0.61□□□□□ -2.31
SRGAP1-203ENST00000537585 TOP2AP11388 1531 aaKnown RBP0.61□□□□□ -2.31
SRGAP1-203ENST00000537585 K7EMI3 77 aa0.61□□□□□ -2.31
SRGAP1-203ENST00000537585 MRPL33O75394 65 aaKnown RBP0.61□□□□□ -2.31
SRGAP1-203ENST00000537585 CRIP1P50238 77 aa0.61□□□□□ -2.31
SRGAP1-203ENST00000537585 STARD9Q9P2P6 4700 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms