RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 A0A0D9SG42 100 aa6.72□□□□□ -1.33
TNC-211ENST00000537320 Q75L30 129 aa6.71□□□□□ -1.33
TNC-211ENST00000537320 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.34
TNC-211ENST00000537320 SPINK7P58062 85 aa6.69□□□□□ -1.34
TNC-211ENST00000537320 WDFY3Q8IZQ1 3526 aa6.69□□□□□ -1.34
TNC-211ENST00000537320 MXRA5Q9NR99 2828 aa6.68□□□□□ -1.34
TNC-211ENST00000537320 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
TNC-211ENST00000537320 S4R3F8 94 aa6.67□□□□□ -1.34
TNC-211ENST00000537320 DCHS1Q96JQ0 3298 aa6.67□□□□□ -1.34
TNC-211ENST00000537320 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
TNC-211ENST00000537320 MUC3AQ02505 3323 aa6.66□□□□□ -1.34
TNC-211ENST00000537320 LAMA5O15230 3695 aa6.65□□□□□ -1.35
TNC-211ENST00000537320 KRTAP29-1A8MX34 341 aaPredicted RBP6.64□□□□□ -1.35
TNC-211ENST00000537320 Q5VV11 94 aa6.63□□□□□ -1.35
TNC-211ENST00000537320 ASB16-AS1Q495Z4 193 aa6.63□□□□□ -1.35
TNC-211ENST00000537320 M0R2T5 61 aa6.62□□□□□ -1.35
TNC-211ENST00000537320 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
TNC-211ENST00000537320 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
TNC-211ENST00000537320 PRAC1Q96KF2 57 aa6.61□□□□□ -1.35
TNC-211ENST00000537320 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
TNC-211ENST00000537320 ASPMQ8IZT6 3477 aa6.6□□□□□ -1.35
TNC-211ENST00000537320 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
TNC-211ENST00000537320 DMDP11532 3685 aa6.57□□□□□ -1.36
TNC-211ENST00000537320 ZFHX4Q86UP3 3567 aa6.55□□□□□ -1.36
TNC-211ENST00000537320 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
TNC-211ENST00000537320 CELSR1Q9NYQ6 3014 aa6.53□□□□□ -1.36
TNC-211ENST00000537320 R4GN34 69 aa6.53□□□□□ -1.36
TNC-211ENST00000537320 TENM3Q9P273 2699 aa6.49□□□□□ -1.37
TNC-211ENST00000537320 LUZP6Q538Z0 58 aa6.48□□□□□ -1.37
TNC-211ENST00000537320 PDZD2O15018 2839 aa6.46□□□□□ -1.38
TNC-211ENST00000537320 TENM1Q9UKZ4 2725 aa6.46□□□□□ -1.38
TNC-211ENST00000537320 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
TNC-211ENST00000537320 H1FX-AS1Q4G0G2 97 aa6.42□□□□□ -1.38
TNC-211ENST00000537320 TENM2Q9NT68 2774 aa6.39□□□□□ -1.39
TNC-211ENST00000537320 M0QZ58 72 aa6.38□□□□□ -1.39
TNC-211ENST00000537320 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
TNC-211ENST00000537320 ROMO1P60602 79 aa6.35□□□□□ -1.39
TNC-211ENST00000537320 OTOGQ6ZRI0 2925 aa6.34□□□□□ -1.39
TNC-211ENST00000537320 A6NN06 94 aa6.34□□□□□ -1.39
TNC-211ENST00000537320 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
TNC-211ENST00000537320 FBN1P35555 2871 aaKnown RBP6.33□□□□□ -1.4
TNC-211ENST00000537320 SMG1Q96Q15 3661 aaKnown RBP6.33□□□□□ -1.4
TNC-211ENST00000537320 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
TNC-211ENST00000537320 CSMD1Q96PZ7 3565 aa6.31□□□□□ -1.4
TNC-211ENST00000537320 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
TNC-211ENST00000537320 SPATA8Q6RVD6 105 aa6.3□□□□□ -1.4
TNC-211ENST00000537320 VWFP04275 2813 aa6.3□□□□□ -1.4
TNC-211ENST00000537320 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
TNC-211ENST00000537320 TGP01266 2768 aa6.26□□□□□ -1.41
TNC-211ENST00000537320 ZFHX3Q15911 3703 aa6.25□□□□□ -1.41
TNC-211ENST00000537320 A8MU10 97 aa6.25□□□□□ -1.41
TNC-211ENST00000537320 A8MUU9 505 aa6.25□□□□□ -1.41
TNC-211ENST00000537320 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
TNC-211ENST00000537320 SVEP1Q4LDE5 3571 aa6.2□□□□□ -1.42
TNC-211ENST00000537320 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
TNC-211ENST00000537320 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
TNC-211ENST00000537320 SPENQ96T58 3664 aaKnown RBP6.15□□□□□ -1.43
TNC-211ENST00000537320 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
TNC-211ENST00000537320 XP32Q5T750 250 aa6.11□□□□□ -1.43
TNC-211ENST00000537320 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
TNC-211ENST00000537320 ANK3Q12955 4377 aaKnown RBP6.09□□□□□ -1.43
TNC-211ENST00000537320 CUBNO60494 3623 aa6.08□□□□□ -1.44
TNC-211ENST00000537320 A0A1B0GVY2 172 aa6.04□□□□□ -1.44
TNC-211ENST00000537320 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
TNC-211ENST00000537320 BSNQ9UPA5 3926 aa6.03□□□□□ -1.44
TNC-211ENST00000537320 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
TNC-211ENST00000537320 TRRAPQ9Y4A5 3859 aa5.98□□□□□ -1.45
TNC-211ENST00000537320 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
TNC-211ENST00000537320 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
TNC-211ENST00000537320 TNP1P09430 55 aa5.95□□□□□ -1.46
TNC-211ENST00000537320 KRTAP10-8P60410 259 aa5.94□□□□□ -1.46
TNC-211ENST00000537320 FBN3Q75N90 2809 aa5.92□□□□□ -1.46
TNC-211ENST00000537320 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
TNC-211ENST00000537320 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
TNC-211ENST00000537320 H0YAA0 97 aa5.82□□□□□ -1.48
TNC-211ENST00000537320 P0C880 135 aa5.77□□□□□ -1.49
TNC-211ENST00000537320 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
TNC-211ENST00000537320 VPS13CQ709C8 3753 aa5.71□□□□□ -1.49
TNC-211ENST00000537320 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
TNC-211ENST00000537320 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
TNC-211ENST00000537320 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
TNC-211ENST00000537320 HUWE1Q7Z6Z7 4374 aaKnown RBP5.66□□□□□ -1.5
TNC-211ENST00000537320 ZNF469Q96JG9 3925 aaPredicted RBP5.62□□□□□ -1.51
TNC-211ENST00000537320 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
TNC-211ENST00000537320 MT1HL1P0DM35 61 aa5.55□□□□□ -1.52
TNC-211ENST00000537320 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
TNC-211ENST00000537320 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
TNC-211ENST00000537320 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
TNC-211ENST00000537320 DNAH9Q9NYC9 4486 aa5.45□□□□□ -1.54
TNC-211ENST00000537320 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
TNC-211ENST00000537320 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
TNC-211ENST00000537320 CSMD3Q7Z407 3707 aa5.41□□□□□ -1.54
TNC-211ENST00000537320 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
TNC-211ENST00000537320 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
TNC-211ENST00000537320 DNHD1Q96M86 4753 aa5.33□□□□□ -1.56
TNC-211ENST00000537320 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
TNC-211ENST00000537320 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
TNC-211ENST00000537320 PLECQ15149 4684 aaKnown RBP5.31□□□□□ -1.56
TNC-211ENST00000537320 KRTAP3-3Q9BYR6 98 aa5.28□□□□□ -1.56
TNC-211ENST00000537320 DNAH1Q9P2D7 4330 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms