RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ARHGAP35Q9NRY4 1499 aa-1.33□□□□□ -2.62
CCDC7-208ENST00000537047 MYH4Q9Y623 1939 aa-1.34□□□□□ -2.62
CCDC7-208ENST00000537047 FANCAO15360 1455 aa-1.34□□□□□ -2.62
CCDC7-208ENST00000537047 ERVK-7P63135 1459 aa-1.34□□□□□ -2.62
CCDC7-208ENST00000537047 A0A1B0GUT8 65 aa-1.34□□□□□ -2.62
CCDC7-208ENST00000537047 GAFA1Q96PS6 74 aa-1.34□□□□□ -2.62
CCDC7-208ENST00000537047 PRO3102Q9H379 93 aa-1.34□□□□□ -2.62
CCDC7-208ENST00000537047 LRRC7Q96NW7 1537 aa-1.35□□□□□ -2.62
CCDC7-208ENST00000537047 M0QZ58 72 aa-1.35□□□□□ -2.63
CCDC7-208ENST00000537047 LEAP2Q969E1 77 aa-1.35□□□□□ -2.63
CCDC7-208ENST00000537047 MED14O60244 1454 aa-1.36□□□□□ -2.63
CCDC7-208ENST00000537047 SMIM11AP58511 58 aa-1.36□□□□□ -2.63
CCDC7-208ENST00000537047 PLGLAQ15195 96 aa-1.36□□□□□ -2.63
CCDC7-208ENST00000537047 ACBD7Q8N6N7 88 aa-1.36□□□□□ -2.63
CCDC7-208ENST00000537047 NRXN3Q9Y4C0 1643 aa-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 MMP24-AS1A0A0U1RRL7 71 aa-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 IQCF6A8MYZ5 107 aa-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 HMGN2P05204 90 aaKnown RBP-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 SPART-AS1P0CW21 52 aa-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 WIZO95785 1651 aa-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 DEPDC5O75140 1603 aa-1.37□□□□□ -2.63
CCDC7-208ENST00000537047 CNTLNQ9NXG0 1405 aa-1.38□□□□□ -2.63
CCDC7-208ENST00000537047 SCN11AQ9UI33 1791 aa-1.38□□□□□ -2.63
CCDC7-208ENST00000537047 CYB5AP00167 134 aa-1.38□□□□□ -2.63
CCDC7-208ENST00000537047 LINC00158P58513 81 aa-1.38□□□□□ -2.63
CCDC7-208ENST00000537047 PIK3C2BO00750 1634 aa-1.38□□□□□ -2.63
CCDC7-208ENST00000537047 RGPD3A6NKT7 1758 aaPredicted RBP-1.39□□□□□ -2.63
CCDC7-208ENST00000537047 RGPD4Q7Z3J3 1758 aa-1.39□□□□□ -2.63
CCDC7-208ENST00000537047 EEA1Q15075 1411 aa-1.39□□□□□ -2.63
CCDC7-208ENST00000537047 RBP2P50120 134 aa-1.39□□□□□ -2.63
CCDC7-208ENST00000537047 ATP7BP35670 1465 aa-1.39□□□□□ -2.63
CCDC7-208ENST00000537047 ATP6V1G2-DDX39BF2Z307 99 aa-1.4□□□□□ -2.63
CCDC7-208ENST00000537047 CROCC2H7BZ55 1655 aa-1.4□□□□□ -2.63
CCDC7-208ENST00000537047 RGPD1P0DJD0 1748 aa-1.4□□□□□ -2.63
CCDC7-208ENST00000537047 MAGI3Q5TCQ9 1506 aa-1.4□□□□□ -2.63
CCDC7-208ENST00000537047 ZC3H13Q5T200 1668 aaKnown RBP-1.41□□□□□ -2.63
CCDC7-208ENST00000537047 PEA15Q15121 130 aa-1.41□□□□□ -2.64
CCDC7-208ENST00000537047 ZNF831Q5JPB2 1677 aa-1.42□□□□□ -2.64
CCDC7-208ENST00000537047 MAST1Q9Y2H9 1570 aa-1.42□□□□□ -2.64
CCDC7-208ENST00000537047 NDUFB1O75438 58 aa-1.42□□□□□ -2.64
CCDC7-208ENST00000537047 IGLV5-48A0A075B6I7 105 aa-1.43□□□□□ -2.64
CCDC7-208ENST00000537047 GYPAP02724 150 aa-1.43□□□□□ -2.64
CCDC7-208ENST00000537047 DNMBPQ6XZF7 1577 aa-1.43□□□□□ -2.64
CCDC7-208ENST00000537047 SUPT6HQ7KZ85 1726 aaKnown RBP-1.43□□□□□ -2.64
CCDC7-208ENST00000537047 USP32Q8NFA0 1604 aa-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 TRAV21A0A0B4J279 112 aa-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 HMGA1P17096 107 aaKnown RBP-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 DEFB121Q5J5C9 76 aa-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 NCMAPQ5T1S8 102 aa-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 DEFB106AQ8N104 65 aa-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 NWD1Q149M9 1564 aa-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 NESP48681 1621 aa-1.44□□□□□ -2.64
CCDC7-208ENST00000537047 CLASP1Q7Z460 1538 aa-1.45□□□□□ -2.64
CCDC7-208ENST00000537047 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.45□□□□□ -2.64
CCDC7-208ENST00000537047 M0R143 59 aa-1.45□□□□□ -2.64
CCDC7-208ENST00000537047 IFI6P09912 130 aa-1.45□□□□□ -2.64
CCDC7-208ENST00000537047 CD52P31358 61 aa-1.45□□□□□ -2.64
CCDC7-208ENST00000537047 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.46□□□□□ -2.64
CCDC7-208ENST00000537047 NEXMIFQ5QGS0 1516 aa-1.46□□□□□ -2.64
CCDC7-208ENST00000537047 POLR1AO95602 1720 aaPredicted RBP-1.46□□□□□ -2.64
CCDC7-208ENST00000537047 LTN1O94822 1766 aa-1.47□□□□□ -2.64
CCDC7-208ENST00000537047 MYO3AQ8NEV4 1616 aa-1.47□□□□□ -2.64
CCDC7-208ENST00000537047 NCOA2Q15596 1464 aa-1.47□□□□□ -2.64
CCDC7-208ENST00000537047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.47□□□□□ -2.64
CCDC7-208ENST00000537047 VPS8Q8N3P4 1428 aa-1.48□□□□□ -2.65
CCDC7-208ENST00000537047 UBR1Q8IWV7 1749 aa-1.48□□□□□ -2.65
CCDC7-208ENST00000537047 DEFB130BP0DP73 79 aa-1.48□□□□□ -2.65
CCDC7-208ENST00000537047 DEFB130AP0DP74 79 aa-1.48□□□□□ -2.65
CCDC7-208ENST00000537047 C20orf78Q9BR46 151 aa-1.48□□□□□ -2.65
CCDC7-208ENST00000537047 RNF17Q9BXT8 1623 aaKnown RBP-1.48□□□□□ -2.65
CCDC7-208ENST00000537047 CCDC88BA6NC98 1476 aa-1.49□□□□□ -2.65
CCDC7-208ENST00000537047 ANKRD36CQ5JPF3 1778 aa-1.49□□□□□ -2.65
CCDC7-208ENST00000537047 THOC2Q8NI27 1593 aaKnown RBP-1.49□□□□□ -2.65
CCDC7-208ENST00000537047 PLIN4Q96Q06 1357 aa-1.49□□□□□ -2.65
CCDC7-208ENST00000537047 MYMXA0A1B0GTQ4 84 aa-1.5□□□□□ -2.65
CCDC7-208ENST00000537047 IAPPP10997 89 aa-1.5□□□□□ -2.65
CCDC7-208ENST00000537047 DEFB133Q30KQ1 61 aa-1.5□□□□□ -2.65
CCDC7-208ENST00000537047 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.5□□□□□ -2.65
CCDC7-208ENST00000537047 LMO7Q8WWI1 1683 aa-1.51□□□□□ -2.65
CCDC7-208ENST00000537047 CEP162Q5TB80 1403 aa-1.51□□□□□ -2.65
CCDC7-208ENST00000537047 CD163L1Q9NR16 1453 aa-1.51□□□□□ -2.65
CCDC7-208ENST00000537047 GLI2P10070 1586 aa-1.51□□□□□ -2.65
CCDC7-208ENST00000537047 ANKRD26Q9UPS8 1709 aa-1.52□□□□□ -2.65
CCDC7-208ENST00000537047 IFI27P40305 119 aaPredicted RBP-1.53□□□□□ -2.65
CCDC7-208ENST00000537047 PREX2Q70Z35 1606 aa-1.53□□□□□ -2.65
CCDC7-208ENST00000537047 DOT1LQ8TEK3 1739 aa-1.53□□□□□ -2.65
CCDC7-208ENST00000537047 DUOX2Q9NRD8 1548 aa-1.53□□□□□ -2.65
CCDC7-208ENST00000537047 KIF21BO75037 1637 aa-1.54□□□□□ -2.66
CCDC7-208ENST00000537047 M0QY20 66 aa-1.54□□□□□ -2.66
CCDC7-208ENST00000537047 SNHG12Q9BXW3 62 aa-1.54□□□□□ -2.66
CCDC7-208ENST00000537047 URB2Q14146 1524 aaKnown RBP-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 CEBPZOSA8MTT3 80 aa-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 MRPL33O75394 65 aaKnown RBP-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 SNRPFP62306 86 aaKnown RBP-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 RABAC1Q9UI14 185 aa-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 TJP1Q07157 1748 aa-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 TOGARAM1Q9Y4F4 1720 aa-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 TMEM131LA2VDJ0 1609 aa-1.55□□□□□ -2.66
CCDC7-208ENST00000537047 DIP2BQ9P265 1576 aa-1.55□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms