RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 A0A1B0GVX0 72 aa8.03□□□□□ -1.12
SMG6-203ENST00000536871 Q5VV11 94 aa8.03□□□□□ -1.12
SMG6-203ENST00000536871 PSPHP1O15172 72 aa8.02□□□□□ -1.12
SMG6-203ENST00000536871 ATP11AUNQ6ZP68 121 aa8.02□□□□□ -1.13
SMG6-203ENST00000536871 C8orf17Q9NRJ1 99 aa8.02□□□□□ -1.13
SMG6-203ENST00000536871 TGP01266 2768 aa8□□□□□ -1.13
SMG6-203ENST00000536871 A8MUN3 132 aa7.99□□□□□ -1.13
SMG6-203ENST00000536871 H0Y9P7 68 aa7.98□□□□□ -1.13
SMG6-203ENST00000536871 Q75L30 129 aa7.98□□□□□ -1.13
SMG6-203ENST00000536871 DNAH8Q96JB1 4490 aa7.97□□□□□ -1.13
SMG6-203ENST00000536871 C8orf87E5RJ46 101 aa7.97□□□□□ -1.13
SMG6-203ENST00000536871 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.13
SMG6-203ENST00000536871 LOC101927531A0A1B0GV80 90 aa7.96□□□□□ -1.13
SMG6-203ENST00000536871 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.13
SMG6-203ENST00000536871 LINC00208Q96KT6 92 aa7.95□□□□□ -1.14
SMG6-203ENST00000536871 MRPL34Q9BQ48 92 aaKnown RBP7.95□□□□□ -1.14
SMG6-203ENST00000536871 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
SMG6-203ENST00000536871 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
SMG6-203ENST00000536871 RBM12B-AS1Q9P1G2 102 aa7.93□□□□□ -1.14
SMG6-203ENST00000536871 CHKB-CPT1BH3BT56 60 aa7.92□□□□□ -1.14
SMG6-203ENST00000536871 DNAH11Q96DT5 4516 aa7.92□□□□□ -1.14
SMG6-203ENST00000536871 A0A087X002 238 aa7.92□□□□□ -1.14
SMG6-203ENST00000536871 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
SMG6-203ENST00000536871 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
SMG6-203ENST00000536871 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
SMG6-203ENST00000536871 A6NN06 94 aa7.9□□□□□ -1.14
SMG6-203ENST00000536871 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
SMG6-203ENST00000536871 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.14
SMG6-203ENST00000536871 FRAS1Q86XX4 4008 aa7.89□□□□□ -1.15
SMG6-203ENST00000536871 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
SMG6-203ENST00000536871 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
SMG6-203ENST00000536871 SPINK1P00995 79 aa7.87□□□□□ -1.15
SMG6-203ENST00000536871 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
SMG6-203ENST00000536871 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
SMG6-203ENST00000536871 C7orf65Q6ZTY9 151 aa7.86□□□□□ -1.15
SMG6-203ENST00000536871 TYMSOSQ8TAI1 123 aa7.86□□□□□ -1.15
SMG6-203ENST00000536871 FAT2Q9NYQ8 4349 aa7.86□□□□□ -1.15
SMG6-203ENST00000536871 SPAG11AQ6PDA7 123 aa7.85□□□□□ -1.15
SMG6-203ENST00000536871 LINC00313P59037 77 aa7.83□□□□□ -1.16
SMG6-203ENST00000536871 LCA10Q71F78 164 aa7.83□□□□□ -1.16
SMG6-203ENST00000536871 PKD1P98161 4303 aa7.83□□□□□ -1.16
SMG6-203ENST00000536871 PRR4Q16378 134 aa7.83□□□□□ -1.16
SMG6-203ENST00000536871 A6NED7 52 aa7.82□□□□□ -1.16
SMG6-203ENST00000536871 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
SMG6-203ENST00000536871 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
SMG6-203ENST00000536871 NOTCH2NLQ7Z3S9 236 aa7.8□□□□□ -1.16
SMG6-203ENST00000536871 A8MU10 97 aa7.79□□□□□ -1.16
SMG6-203ENST00000536871 SPTSSBQ8NFR3 76 aa7.79□□□□□ -1.16
SMG6-203ENST00000536871 COA5Q86WW8 74 aa7.78□□□□□ -1.16
SMG6-203ENST00000536871 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
SMG6-203ENST00000536871 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.17
SMG6-203ENST00000536871 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
SMG6-203ENST00000536871 HYDINQ4G0P3 5121 aa7.75□□□□□ -1.17
SMG6-203ENST00000536871 SACSQ9NZJ4 4579 aa7.73□□□□□ -1.17
SMG6-203ENST00000536871 KRTAP13-3Q3SY46 172 aa7.72□□□□□ -1.17
SMG6-203ENST00000536871 PRR26Q8N8Z3 221 aa7.71□□□□□ -1.18
SMG6-203ENST00000536871 SMR3BP02814 79 aaPredicted RBP7.7□□□□□ -1.18
SMG6-203ENST00000536871 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
SMG6-203ENST00000536871 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
SMG6-203ENST00000536871 PCOTHQ58A44 107 aa7.68□□□□□ -1.18
SMG6-203ENST00000536871 Q5W150 140 aa7.67□□□□□ -1.18
SMG6-203ENST00000536871 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
SMG6-203ENST00000536871 IGKV2-30P06310 120 aa7.62□□□□□ -1.19
SMG6-203ENST00000536871 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
SMG6-203ENST00000536871 ACYP2P14621 99 aa7.58□□□□□ -1.2
SMG6-203ENST00000536871 SPINK7P58062 85 aa7.56□□□□□ -1.2
SMG6-203ENST00000536871 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
SMG6-203ENST00000536871 HRES1P13985 223 aa7.54□□□□□ -1.2
SMG6-203ENST00000536871 KMT2CQ8NEZ4 4911 aaKnown RBP7.53□□□□□ -1.2
SMG6-203ENST00000536871 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
SMG6-203ENST00000536871 RYR2Q92736 4967 aa7.52□□□□□ -1.21
SMG6-203ENST00000536871 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.21
SMG6-203ENST00000536871 LINC01554Q52M75 96 aa7.51□□□□□ -1.21
SMG6-203ENST00000536871 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
SMG6-203ENST00000536871 A8MUU9 505 aa7.49□□□□□ -1.21
SMG6-203ENST00000536871 Q5VSD8 79 aa7.49□□□□□ -1.21
SMG6-203ENST00000536871 RETNLBQ9BQ08 111 aa7.49□□□□□ -1.21
SMG6-203ENST00000536871 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
SMG6-203ENST00000536871 RYR3Q15413 4870 aa7.47□□□□□ -1.21
SMG6-203ENST00000536871 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
SMG6-203ENST00000536871 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
SMG6-203ENST00000536871 FAT1Q14517 4588 aa7.41□□□□□ -1.22
SMG6-203ENST00000536871 C9orf92A6NGG3 77 aa7.4□□□□□ -1.23
SMG6-203ENST00000536871 Q8N1X5 172 aa7.39□□□□□ -1.23
SMG6-203ENST00000536871 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
SMG6-203ENST00000536871 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
SMG6-203ENST00000536871 H3BS24 57 aa7.35□□□□□ -1.23
SMG6-203ENST00000536871 A0A1B0GU69 56 aa7.34□□□□□ -1.23
SMG6-203ENST00000536871 UQCR11O14957 56 aa7.33□□□□□ -1.24
SMG6-203ENST00000536871 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
SMG6-203ENST00000536871 FLG2Q5D862 2391 aaPredicted RBP7.29□□□□□ -1.24
SMG6-203ENST00000536871 ADM2Q7Z4H4 148 aa7.28□□□□□ -1.24
SMG6-203ENST00000536871 HSPG2P98160 4391 aa7.24□□□□□ -1.25
SMG6-203ENST00000536871 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
SMG6-203ENST00000536871 EPPK1P58107 5090 aaKnown RBP7.22□□□□□ -1.25
SMG6-203ENST00000536871 MT1HL1P0DM35 61 aa7.21□□□□□ -1.25
SMG6-203ENST00000536871 RYR1P21817 5038 aa7.19□□□□□ -1.26
SMG6-203ENST00000536871 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
SMG6-203ENST00000536871 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
SMG6-203ENST00000536871 XP32Q5T750 250 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 349.1 ms