RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
KNTC1-209ENST00000536625 C5orf42Q9H799 3197 aa2.3□□□□□ -2.04
KNTC1-209ENST00000536625 DMXL2Q8TDJ6 3036 aa2.29□□□□□ -2.04
KNTC1-209ENST00000536625 SPTA1P02549 2419 aa2.29□□□□□ -2.04
KNTC1-209ENST00000536625 TPRP12270 2363 aaKnown RBP2.29□□□□□ -2.04
KNTC1-209ENST00000536625 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
KNTC1-209ENST00000536625 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
KNTC1-209ENST00000536625 UBE2DNLQ8IWF7 75 aa2.29□□□□□ -2.04
KNTC1-209ENST00000536625 FREM2Q5SZK8 3169 aa2.29□□□□□ -2.04
KNTC1-209ENST00000536625 RP1L1Q8IWN7 2480 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-209ENST00000536625 ZFHX2Q9C0A1 2572 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-209ENST00000536625 DEFB135Q30KP9 77 aa2.28□□□□□ -2.04
KNTC1-209ENST00000536625 LAMA1P25391 3075 aa2.28□□□□□ -2.05
KNTC1-209ENST00000536625 BDP1A6H8Y1 2624 aa2.27□□□□□ -2.05
KNTC1-209ENST00000536625 MAST4O15021 2626 aa2.27□□□□□ -2.05
KNTC1-209ENST00000536625 TTC28Q96AY4 2481 aa2.27□□□□□ -2.05
KNTC1-209ENST00000536625 ABCA2Q9BZC7 2435 aa2.27□□□□□ -2.05
KNTC1-209ENST00000536625 EYSQ5T1H1 3165 aa2.27□□□□□ -2.05
KNTC1-209ENST00000536625 REV3LO60673 3130 aa2.27□□□□□ -2.05
KNTC1-209ENST00000536625 C2CD3Q4AC94 2353 aa2.27□□□□□ -2.05
KNTC1-209ENST00000536625 MUC6Q6W4X9 2439 aa2.26□□□□□ -2.05
KNTC1-209ENST00000536625 ITPR1Q14643 2758 aa2.26□□□□□ -2.05
KNTC1-209ENST00000536625 DEFB124Q8NES8 71 aa2.26□□□□□ -2.05
KNTC1-209ENST00000536625 LAMA3Q16787 3333 aa2.25□□□□□ -2.05
KNTC1-209ENST00000536625 ANKRD11Q6UB99 2663 aaPredicted RBP2.25□□□□□ -2.05
KNTC1-209ENST00000536625 DMXL1Q9Y485 3027 aa2.25□□□□□ -2.05
KNTC1-209ENST00000536625 ZNF462Q96JM2 2506 aa2.24□□□□□ -2.05
KNTC1-209ENST00000536625 MAP1AP78559 2803 aaPredicted RBP2.24□□□□□ -2.05
KNTC1-209ENST00000536625 EPG5Q9HCE0 2579 aa2.24□□□□□ -2.05
KNTC1-209ENST00000536625 LAMA5O15230 3695 aa2.23□□□□□ -2.05
KNTC1-209ENST00000536625 FLNBO75369 2602 aaKnown RBP2.23□□□□□ -2.05
KNTC1-209ENST00000536625 SMG1Q96Q15 3661 aaKnown RBP2.23□□□□□ -2.05
KNTC1-209ENST00000536625 COL12A1Q99715 3063 aa2.23□□□□□ -2.05
KNTC1-209ENST00000536625 KRTAP12-1P59990 96 aa2.23□□□□□ -2.05
KNTC1-209ENST00000536625 BRCA2P51587 3418 aa2.23□□□□□ -2.05
KNTC1-209ENST00000536625 DNAH1Q9P2D7 4330 aa2.22□□□□□ -2.05
KNTC1-209ENST00000536625 ZNF292O60281 2723 aa2.22□□□□□ -2.05
KNTC1-209ENST00000536625 FASNP49327 2511 aaKnown RBP2.22□□□□□ -2.05
KNTC1-209ENST00000536625 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
KNTC1-209ENST00000536625 PIEZO2Q9H5I5 2752 aa2.22□□□□□ -2.05
KNTC1-209ENST00000536625 HTTP42858 3142 aa2.22□□□□□ -2.05
KNTC1-209ENST00000536625 CHD9Q3L8U1 2897 aa2.21□□□□□ -2.06
KNTC1-209ENST00000536625 PRRC2CQ9Y520 2896 aaKnown RBP2.21□□□□□ -2.06
KNTC1-209ENST00000536625 USP9XQ93008 2570 aaPredicted RBP2.21□□□□□ -2.06
KNTC1-209ENST00000536625 SPG11Q96JI7 2443 aa2.21□□□□□ -2.06
KNTC1-209ENST00000536625 TACC2O95359 2948 aa2.21□□□□□ -2.06
KNTC1-209ENST00000536625 UBR5O95071 2799 aaPredicted RBP2.21□□□□□ -2.06
KNTC1-209ENST00000536625 NCOR2Q9Y618 2525 aa2.2□□□□□ -2.06
KNTC1-209ENST00000536625 GVINP1Q7Z2Y8 2422 aa2.2□□□□□ -2.06
KNTC1-209ENST00000536625 DNAH11Q96DT5 4516 aa2.19□□□□□ -2.06
KNTC1-209ENST00000536625 NAV2Q8IVL1 2488 aa2.18□□□□□ -2.06
KNTC1-209ENST00000536625 LOC400499M0QZD8 3231 aa2.18□□□□□ -2.06
KNTC1-209ENST00000536625 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
KNTC1-209ENST00000536625 CSPG4Q6UVK1 2322 aa2.18□□□□□ -2.06
KNTC1-209ENST00000536625 HIVEP2P31629 2446 aa2.18□□□□□ -2.06
KNTC1-209ENST00000536625 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
KNTC1-209ENST00000536625 NBASA2RRP1 2371 aa2.17□□□□□ -2.06
KNTC1-209ENST00000536625 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
KNTC1-209ENST00000536625 MYCBP2O75592 4640 aa2.17□□□□□ -2.06
KNTC1-209ENST00000536625 CDH23Q9H251 3354 aa2.17□□□□□ -2.06
KNTC1-209ENST00000536625 CELSR1Q9NYQ6 3014 aa2.17□□□□□ -2.06
KNTC1-209ENST00000536625 CEP290O15078 2479 aa2.16□□□□□ -2.06
KNTC1-209ENST00000536625 CACNA1HO95180 2353 aa2.16□□□□□ -2.06
KNTC1-209ENST00000536625 FAM208BQ5VWN6 2430 aa2.16□□□□□ -2.06
KNTC1-209ENST00000536625 LRBAP50851 2863 aa2.16□□□□□ -2.06
KNTC1-209ENST00000536625 GCN1Q92616 2671 aaKnown RBP2.16□□□□□ -2.06
KNTC1-209ENST00000536625 FBN3Q75N90 2809 aa2.16□□□□□ -2.06
KNTC1-209ENST00000536625 ATMQ13315 3056 aa2.16□□□□□ -2.06
KNTC1-209ENST00000536625 PTPN13Q12923 2485 aa2.15□□□□□ -2.06
KNTC1-209ENST00000536625 DCHS2Q6V1P9 2916 aa2.15□□□□□ -2.06
KNTC1-209ENST00000536625 KRTAP21-3Q3LHN1 58 aa2.15□□□□□ -2.07
KNTC1-209ENST00000536625 TEP1Q99973 2627 aaKnown RBP2.14□□□□□ -2.07
KNTC1-209ENST00000536625 CRYBG3Q68DQ2 2970 aa2.14□□□□□ -2.07
KNTC1-209ENST00000536625 FN1P02751 2386 aaKnown RBP2.14□□□□□ -2.07
KNTC1-209ENST00000536625 ACACBO00763 2458 aa2.13□□□□□ -2.07
KNTC1-209ENST00000536625 CELSR3Q9NYQ7 3312 aa2.13□□□□□ -2.07
KNTC1-209ENST00000536625 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
KNTC1-209ENST00000536625 OTOGLQ3ZCN5 2332 aa2.12□□□□□ -2.07
KNTC1-209ENST00000536625 TRRAPQ9Y4A5 3859 aa2.12□□□□□ -2.07
KNTC1-209ENST00000536625 DOPEY1Q5JWR5 2465 aa2.11□□□□□ -2.07
KNTC1-209ENST00000536625 F8P00451 2351 aa2.1□□□□□ -2.07
KNTC1-209ENST00000536625 NF1P21359 2839 aa2.1□□□□□ -2.07
KNTC1-209ENST00000536625 HRNRQ86YZ3 2850 aaPredicted RBP2.1□□□□□ -2.07
KNTC1-209ENST00000536625 SPTAN1Q13813 2472 aaKnown RBP2.1□□□□□ -2.07
KNTC1-209ENST00000536625 CCDC168Q8NDH2 2452 aa2.1□□□□□ -2.07
KNTC1-209ENST00000536625 M0QZ58 72 aa2.1□□□□□ -2.07
KNTC1-209ENST00000536625 ANK3Q12955 4377 aaKnown RBP2.1□□□□□ -2.07
KNTC1-209ENST00000536625 USP24Q9UPU5 2620 aa2.1□□□□□ -2.07
KNTC1-209ENST00000536625 ABCA12Q86UK0 2595 aa2.09□□□□□ -2.07
KNTC1-209ENST00000536625 MYO18BQ8IUG5 2567 aa2.09□□□□□ -2.07
KNTC1-209ENST00000536625 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.07
KNTC1-209ENST00000536625 COL6A5A8TX70 2615 aa2.09□□□□□ -2.07
KNTC1-209ENST00000536625 MYO15AQ9UKN7 3530 aa2.09□□□□□ -2.07
KNTC1-209ENST00000536625 TEX15Q9BXT5 2789 aa2.09□□□□□ -2.07
KNTC1-209ENST00000536625 RELNP78509 3460 aa2.09□□□□□ -2.08
KNTC1-209ENST00000536625 HIVEP3Q5T1R4 2406 aa2.09□□□□□ -2.08
KNTC1-209ENST00000536625 APCP25054 2843 aa2.09□□□□□ -2.08
KNTC1-209ENST00000536625 ASPMQ8IZT6 3477 aa2.08□□□□□ -2.08
KNTC1-209ENST00000536625 VWFP04275 2813 aa2.08□□□□□ -2.08
KNTC1-209ENST00000536625 KRTAP13-2Q52LG2 175 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms