RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 TGP01266 2768 aa11.09□□□□□ -0.63
CHPF-203ENST00000535926 A8MU10 97 aa11.07□□□□□ -0.64
CHPF-203ENST00000535926 MRPL34Q9BQ48 92 aaKnown RBP11.07□□□□□ -0.64
CHPF-203ENST00000535926 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
CHPF-203ENST00000535926 ALMS1Q8TCU4 4167 aa11.06□□□□□ -0.64
CHPF-203ENST00000535926 DNAH6Q9C0G6 4158 aa11.04□□□□□ -0.64
CHPF-203ENST00000535926 LIMD2Q9BT23 127 aa11.04□□□□□ -0.64
CHPF-203ENST00000535926 MEGF8Q7Z7M0 2845 aa11.04□□□□□ -0.64
CHPF-203ENST00000535926 PRR15LQ9BU68 103 aa11.02□□□□□ -0.65
CHPF-203ENST00000535926 DNAH11Q96DT5 4516 aa11.01□□□□□ -0.65
CHPF-203ENST00000535926 SPINK6Q6UWN8 80 aa11.01□□□□□ -0.65
CHPF-203ENST00000535926 CHKB-CPT1BH3BT56 60 aa10.99□□□□□ -0.65
CHPF-203ENST00000535926 IGLV7-43P04211 117 aa10.99□□□□□ -0.65
CHPF-203ENST00000535926 Q5W150 140 aa10.97□□□□□ -0.65
CHPF-203ENST00000535926 CIRBP-AS1Q8TBR5 109 aa10.97□□□□□ -0.65
CHPF-203ENST00000535926 DNAH5Q8TE73 4624 aa10.96□□□□□ -0.65
CHPF-203ENST00000535926 C1orf134Q5TEV5 83 aa10.94□□□□□ -0.66
CHPF-203ENST00000535926 HRES1P13985 223 aa10.93□□□□□ -0.66
CHPF-203ENST00000535926 LOC101927531A0A1B0GV80 90 aa10.93□□□□□ -0.66
CHPF-203ENST00000535926 KRTAP13-3Q3SY46 172 aa10.91□□□□□ -0.66
CHPF-203ENST00000535926 SPAG11AQ6PDA7 123 aa10.91□□□□□ -0.66
CHPF-203ENST00000535926 Q75L30 129 aa10.9□□□□□ -0.66
CHPF-203ENST00000535926 DNHD1Q96M86 4753 aa10.87□□□□□ -0.67
CHPF-203ENST00000535926 LCA10Q71F78 164 aa10.87□□□□□ -0.67
CHPF-203ENST00000535926 LINC01558Q9Y6Z2 57 aa10.86□□□□□ -0.67
CHPF-203ENST00000535926 LRP1BQ9NZR2 4599 aa10.85□□□□□ -0.67
CHPF-203ENST00000535926 KRTAP10-2P60368 255 aa10.85□□□□□ -0.67
CHPF-203ENST00000535926 SSBP3-AS1Q7Z2R9 100 aa10.85□□□□□ -0.67
CHPF-203ENST00000535926 LY6G6CO95867 125 aa10.84□□□□□ -0.67
CHPF-203ENST00000535926 PMAIP1Q13794 54 aa10.84□□□□□ -0.67
CHPF-203ENST00000535926 A6NED7 52 aa10.83□□□□□ -0.68
CHPF-203ENST00000535926 PRR26Q8N8Z3 221 aa10.78□□□□□ -0.68
CHPF-203ENST00000535926 KRTAP13-2Q52LG2 175 aa10.78□□□□□ -0.68
CHPF-203ENST00000535926 C8orf87E5RJ46 101 aa10.77□□□□□ -0.69
CHPF-203ENST00000535926 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
CHPF-203ENST00000535926 LINC00313P59037 77 aa10.75□□□□□ -0.69
CHPF-203ENST00000535926 PKD1P98161 4303 aa10.75□□□□□ -0.69
CHPF-203ENST00000535926 RETNLBQ9BQ08 111 aa10.75□□□□□ -0.69
CHPF-203ENST00000535926 FAT2Q9NYQ8 4349 aa10.72□□□□□ -0.69
CHPF-203ENST00000535926 SPINK7P58062 85 aa10.71□□□□□ -0.69
CHPF-203ENST00000535926 VPS13BQ7Z7G8 4022 aa10.71□□□□□ -0.69
CHPF-203ENST00000535926 CDC42SE1Q9NRR8 79 aa10.71□□□□□ -0.69
CHPF-203ENST00000535926 HYDINQ4G0P3 5121 aa10.71□□□□□ -0.7
CHPF-203ENST00000535926 ATP11AUNQ6ZP68 121 aa10.71□□□□□ -0.7
CHPF-203ENST00000535926 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
CHPF-203ENST00000535926 ACYP2P14621 99 aa10.69□□□□□ -0.7
CHPF-203ENST00000535926 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
CHPF-203ENST00000535926 Q6ZSA8 131 aa10.66□□□□□ -0.7
CHPF-203ENST00000535926 KRTAP16-1A8MUX0 517 aa10.65□□□□□ -0.71
CHPF-203ENST00000535926 DMAC1Q96GE9 116 aa10.65□□□□□ -0.71
CHPF-203ENST00000535926 KRTAP1-4P0C5Y4 121 aa10.63□□□□□ -0.71
CHPF-203ENST00000535926 IGKV2-30P06310 120 aa10.62□□□□□ -0.71
CHPF-203ENST00000535926 SEC61GP60059 68 aa10.6□□□□□ -0.71
CHPF-203ENST00000535926 A6NN06 94 aa10.6□□□□□ -0.71
CHPF-203ENST00000535926 KTN1-AS1Q86SY8 53 aa10.54□□□□□ -0.72
CHPF-203ENST00000535926 IGKV2D-30A0A075B6S6 120 aa10.51□□□□□ -0.73
CHPF-203ENST00000535926 PLA2G1BP04054 148 aaKnown RBP10.5□□□□□ -0.73
CHPF-203ENST00000535926 PKHD1P08F94 4074 aa10.47□□□□□ -0.73
CHPF-203ENST00000535926 TYMSOSQ8TAI1 123 aa10.46□□□□□ -0.74
CHPF-203ENST00000535926 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
CHPF-203ENST00000535926 A0A1B0GU69 56 aa10.43□□□□□ -0.74
CHPF-203ENST00000535926 SPINK1P00995 79 aa10.4□□□□□ -0.74
CHPF-203ENST00000535926 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
CHPF-203ENST00000535926 RBM12B-AS1Q9P1G2 102 aa10.35□□□□□ -0.75
CHPF-203ENST00000535926 SACSQ9NZJ4 4579 aa10.32□□□□□ -0.76
CHPF-203ENST00000535926 SPATA8Q6RVD6 105 aa10.31□□□□□ -0.76
CHPF-203ENST00000535926 Q8N1X5 172 aa10.29□□□□□ -0.76
CHPF-203ENST00000535926 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
CHPF-203ENST00000535926 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
CHPF-203ENST00000535926 FAT1Q14517 4588 aa10.27□□□□□ -0.77
CHPF-203ENST00000535926 UQCR11O14957 56 aa10.25□□□□□ -0.77
CHPF-203ENST00000535926 MIR22HGQ0VDD5 57 aa10.25□□□□□ -0.77
CHPF-203ENST00000535926 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
CHPF-203ENST00000535926 RPS29P62273 56 aaKnown RBP10.21□□□□□ -0.77
CHPF-203ENST00000535926 PKHD1L1Q86WI1 4243 aa10.2□□□□□ -0.78
CHPF-203ENST00000535926 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
CHPF-203ENST00000535926 ADM2Q7Z4H4 148 aa10.17□□□□□ -0.78
CHPF-203ENST00000535926 PRAC1Q96KF2 57 aa10.17□□□□□ -0.78
CHPF-203ENST00000535926 APOBP04114 4563 aaKnown RBP10.15□□□□□ -0.78
CHPF-203ENST00000535926 A8MUU9 505 aa10.11□□□□□ -0.79
CHPF-203ENST00000535926 C20orf166-AS1Q96NR2 134 aa10.11□□□□□ -0.79
CHPF-203ENST00000535926 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
CHPF-203ENST00000535926 KRTAP10-4P60372 401 aaPredicted RBP10.09□□□□□ -0.79
CHPF-203ENST00000535926 A0A1B0GVY2 172 aa10.02□□□□□ -0.81
CHPF-203ENST00000535926 H0YAA0 97 aa9.95□□□□□ -0.82
CHPF-203ENST00000535926 FLG2Q5D862 2391 aaPredicted RBP9.89□□□□□ -0.83
CHPF-203ENST00000535926 RYR2Q92736 4967 aa9.89□□□□□ -0.83
CHPF-203ENST00000535926 LRP1Q07954 4544 aaKnown RBP9.88□□□□□ -0.83
CHPF-203ENST00000535926 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
CHPF-203ENST00000535926 KRTAP21-3Q3LHN1 58 aa9.87□□□□□ -0.83
CHPF-203ENST00000535926 A0A1B0GU33 70 aa9.86□□□□□ -0.83
CHPF-203ENST00000535926 TNXBP22105 4242 aa9.85□□□□□ -0.83
CHPF-203ENST00000535926 KMT2CQ8NEZ4 4911 aaKnown RBP9.84□□□□□ -0.83
CHPF-203ENST00000535926 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
CHPF-203ENST00000535926 COX6B2Q6YFQ2 88 aa9.82□□□□□ -0.84
CHPF-203ENST00000535926 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
CHPF-203ENST00000535926 HSPG2P98160 4391 aa9.8□□□□□ -0.84
CHPF-203ENST00000535926 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
CHPF-203ENST00000535926 MYCBP2O75592 4640 aa9.73□□□□□ -0.85
CHPF-203ENST00000535926 KRTAP10-8P60410 259 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms