RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 KRTAP10-2P60368 255 aa11.04□□□□□ -0.64
COPS7A-204ENST00000534947 NDUFS5O43920 106 aa11.02□□□□□ -0.65
COPS7A-204ENST00000534947 C8orf87E5RJ46 101 aa10.99□□□□□ -0.65
COPS7A-204ENST00000534947 A0A087X002 238 aa10.98□□□□□ -0.65
COPS7A-204ENST00000534947 C1orf195Q5TG92 126 aa10.98□□□□□ -0.65
COPS7A-204ENST00000534947 NOTCH2NLQ7Z3S9 236 aa10.98□□□□□ -0.65
COPS7A-204ENST00000534947 ALMS1Q8TCU4 4167 aa10.97□□□□□ -0.65
COPS7A-204ENST00000534947 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.66
COPS7A-204ENST00000534947 BRK1Q8WUW1 75 aa10.95□□□□□ -0.66
COPS7A-204ENST00000534947 LOC101927531A0A1B0GV80 90 aa10.94□□□□□ -0.66
COPS7A-204ENST00000534947 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
COPS7A-204ENST00000534947 KRTAP10-1P60331 282 aa10.92□□□□□ -0.66
COPS7A-204ENST00000534947 COA5Q86WW8 74 aa10.91□□□□□ -0.66
COPS7A-204ENST00000534947 LIMD2Q9BT23 127 aa10.91□□□□□ -0.66
COPS7A-204ENST00000534947 DNAH11Q96DT5 4516 aa10.9□□□□□ -0.66
COPS7A-204ENST00000534947 KRTAP13-3Q3SY46 172 aa10.9□□□□□ -0.66
COPS7A-204ENST00000534947 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
COPS7A-204ENST00000534947 DNAH5Q8TE73 4624 aa10.88□□□□□ -0.67
COPS7A-204ENST00000534947 Q8N9P0 234 aaPredicted RBP10.88□□□□□ -0.67
COPS7A-204ENST00000534947 DNHD1Q96M86 4753 aa10.88□□□□□ -0.67
COPS7A-204ENST00000534947 KRTAP21-3Q3LHN1 58 aa10.86□□□□□ -0.67
COPS7A-204ENST00000534947 PSPHP1O15172 72 aa10.85□□□□□ -0.67
COPS7A-204ENST00000534947 LINC00313P59037 77 aa10.84□□□□□ -0.67
COPS7A-204ENST00000534947 Q5W150 140 aa10.83□□□□□ -0.68
COPS7A-204ENST00000534947 PKD1P98161 4303 aa10.83□□□□□ -0.68
COPS7A-204ENST00000534947 KRTAP1-4P0C5Y4 121 aa10.82□□□□□ -0.68
COPS7A-204ENST00000534947 A8MUN3 132 aa10.82□□□□□ -0.68
COPS7A-204ENST00000534947 FAM229AH3BQW9 127 aa10.79□□□□□ -0.68
COPS7A-204ENST00000534947 Q5VV11 94 aa10.79□□□□□ -0.68
COPS7A-204ENST00000534947 FAT2Q9NYQ8 4349 aa10.76□□□□□ -0.69
COPS7A-204ENST00000534947 HRES1P13985 223 aa10.75□□□□□ -0.69
COPS7A-204ENST00000534947 PRR15LQ9BU68 103 aa10.72□□□□□ -0.69
COPS7A-204ENST00000534947 KRTAP16-1A8MUX0 517 aa10.71□□□□□ -0.69
COPS7A-204ENST00000534947 Q75L30 129 aa10.71□□□□□ -0.69
COPS7A-204ENST00000534947 LINC01558Q9Y6Z2 57 aa10.7□□□□□ -0.7
COPS7A-204ENST00000534947 SPINK1P00995 79 aa10.7□□□□□ -0.7
COPS7A-204ENST00000534947 C4orf48Q5BLP8 95 aa10.7□□□□□ -0.7
COPS7A-204ENST00000534947 LRP1BQ9NZR2 4599 aa10.69□□□□□ -0.7
COPS7A-204ENST00000534947 PLA2G1BP04054 148 aaKnown RBP10.69□□□□□ -0.7
COPS7A-204ENST00000534947 TYMSOSQ8TAI1 123 aa10.67□□□□□ -0.7
COPS7A-204ENST00000534947 ACYP2P14621 99 aa10.67□□□□□ -0.7
COPS7A-204ENST00000534947 CHKB-CPT1BH3BT56 60 aa10.66□□□□□ -0.7
COPS7A-204ENST00000534947 IGKV2-30P06310 120 aa10.66□□□□□ -0.7
COPS7A-204ENST00000534947 RPS29P62273 56 aaKnown RBP10.65□□□□□ -0.7
COPS7A-204ENST00000534947 DMAC1Q96GE9 116 aa10.64□□□□□ -0.71
COPS7A-204ENST00000534947 VPS13BQ7Z7G8 4022 aa10.63□□□□□ -0.71
COPS7A-204ENST00000534947 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
COPS7A-204ENST00000534947 HYDINQ4G0P3 5121 aa10.6□□□□□ -0.71
COPS7A-204ENST00000534947 LINC00304Q8N9R0 145 aa10.55□□□□□ -0.72
COPS7A-204ENST00000534947 A6NED7 52 aa10.53□□□□□ -0.72
COPS7A-204ENST00000534947 PRR26Q8N8Z3 221 aa10.53□□□□□ -0.72
COPS7A-204ENST00000534947 RETNLBQ9BQ08 111 aa10.52□□□□□ -0.73
COPS7A-204ENST00000534947 CDC42SE1Q9NRR8 79 aa10.48□□□□□ -0.73
COPS7A-204ENST00000534947 LCA10Q71F78 164 aa10.46□□□□□ -0.73
COPS7A-204ENST00000534947 A0A1B0GVY2 172 aa10.46□□□□□ -0.74
COPS7A-204ENST00000534947 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
COPS7A-204ENST00000534947 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
COPS7A-204ENST00000534947 A8MU10 97 aa10.44□□□□□ -0.74
COPS7A-204ENST00000534947 SACSQ9NZJ4 4579 aa10.43□□□□□ -0.74
COPS7A-204ENST00000534947 PKHD1P08F94 4074 aa10.42□□□□□ -0.74
COPS7A-204ENST00000534947 KRTAP10-4P60372 401 aaPredicted RBP10.39□□□□□ -0.75
COPS7A-204ENST00000534947 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
COPS7A-204ENST00000534947 PMAIP1Q13794 54 aa10.38□□□□□ -0.75
COPS7A-204ENST00000534947 SMR3BP02814 79 aaPredicted RBP10.37□□□□□ -0.75
COPS7A-204ENST00000534947 SPINK7P58062 85 aa10.36□□□□□ -0.75
COPS7A-204ENST00000534947 SPTSSBQ8NFR3 76 aa10.31□□□□□ -0.76
COPS7A-204ENST00000534947 C20orf166-AS1Q96NR2 134 aa10.31□□□□□ -0.76
COPS7A-204ENST00000534947 A8MUU9 505 aa10.31□□□□□ -0.76
COPS7A-204ENST00000534947 A0A1B0GU69 56 aa10.29□□□□□ -0.76
COPS7A-204ENST00000534947 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
COPS7A-204ENST00000534947 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
COPS7A-204ENST00000534947 A6NN06 94 aa10.23□□□□□ -0.77
COPS7A-204ENST00000534947 APOBP04114 4563 aaKnown RBP10.23□□□□□ -0.77
COPS7A-204ENST00000534947 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
COPS7A-204ENST00000534947 KTN1-AS1Q86SY8 53 aa10.18□□□□□ -0.78
COPS7A-204ENST00000534947 SPATA8Q6RVD6 105 aa10.16□□□□□ -0.78
COPS7A-204ENST00000534947 Q8N1X5 172 aa10.15□□□□□ -0.78
COPS7A-204ENST00000534947 UQCR11O14957 56 aa10.14□□□□□ -0.79
COPS7A-204ENST00000534947 FAT1Q14517 4588 aa10.1□□□□□ -0.79
COPS7A-204ENST00000534947 SEC61GP60059 68 aa10.07□□□□□ -0.8
COPS7A-204ENST00000534947 MIR22HGQ0VDD5 57 aa10.06□□□□□ -0.8
COPS7A-204ENST00000534947 FLG2Q5D862 2391 aaPredicted RBP10.04□□□□□ -0.8
COPS7A-204ENST00000534947 RYR2Q92736 4967 aa10.03□□□□□ -0.8
COPS7A-204ENST00000534947 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
COPS7A-204ENST00000534947 KRTAP3-1Q9BYR8 98 aa10□□□□□ -0.81
COPS7A-204ENST00000534947 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
COPS7A-204ENST00000534947 Q5VSD8 79 aa9.94□□□□□ -0.82
COPS7A-204ENST00000534947 TNXBP22105 4242 aa9.89□□□□□ -0.83
COPS7A-204ENST00000534947 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
COPS7A-204ENST00000534947 KMT2CQ8NEZ4 4911 aaKnown RBP9.83□□□□□ -0.84
COPS7A-204ENST00000534947 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
COPS7A-204ENST00000534947 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
COPS7A-204ENST00000534947 HSPG2P98160 4391 aa9.81□□□□□ -0.84
COPS7A-204ENST00000534947 A0A1B0GU33 70 aa9.77□□□□□ -0.85
COPS7A-204ENST00000534947 XP32Q5T750 250 aa9.77□□□□□ -0.85
COPS7A-204ENST00000534947 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
COPS7A-204ENST00000534947 H0YAA0 97 aa9.75□□□□□ -0.85
COPS7A-204ENST00000534947 LRP1Q07954 4544 aaKnown RBP9.73□□□□□ -0.85
COPS7A-204ENST00000534947 MT1HL1P0DM35 61 aa9.67□□□□□ -0.86
COPS7A-204ENST00000534947 DMBT1Q9UGM3 2413 aaPredicted RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms