RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 DEFB116Q30KQ4 102 aa11.18□□□□□ -0.62
PKP3-211ENST00000534401 NOTCH2NLQ7Z3S9 236 aa11.16□□□□□ -0.62
PKP3-211ENST00000534401 H3BT86 120 aa11.13□□□□□ -0.63
PKP3-211ENST00000534401 J3KT08 172 aa11.12□□□□□ -0.63
PKP3-211ENST00000534401 C14orf132Q9NPU4 83 aa11.12□□□□□ -0.63
PKP3-211ENST00000534401 A0A1B0GVX0 72 aa11.1□□□□□ -0.63
PKP3-211ENST00000534401 MT1HP80294 61 aa11.1□□□□□ -0.63
PKP3-211ENST00000534401 C8orf87E5RJ46 101 aa11.08□□□□□ -0.64
PKP3-211ENST00000534401 IGHV6-1A0A0B4J1U7 121 aa11.07□□□□□ -0.64
PKP3-211ENST00000534401 COL5A1-AS1Q5SY13 56 aa11.03□□□□□ -0.64
PKP3-211ENST00000534401 FLGP20930 4061 aaPredicted RBP11.01□□□□□ -0.65
PKP3-211ENST00000534401 MTURNQ8N3F0 131 aa11.01□□□□□ -0.65
PKP3-211ENST00000534401 SPCS1Q9Y6A9 102 aa11.01□□□□□ -0.65
PKP3-211ENST00000534401 A8MWP4 228 aa10.98□□□□□ -0.65
PKP3-211ENST00000534401 SMCPP49901 116 aaPredicted RBP10.98□□□□□ -0.65
PKP3-211ENST00000534401 NDUFB1O75438 58 aa10.96□□□□□ -0.65
PKP3-211ENST00000534401 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
PKP3-211ENST00000534401 NREPQ16612 68 aa10.95□□□□□ -0.66
PKP3-211ENST00000534401 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
PKP3-211ENST00000534401 COX6B2Q6YFQ2 88 aa10.94□□□□□ -0.66
PKP3-211ENST00000534401 Q8N9P0 234 aaPredicted RBP10.94□□□□□ -0.66
PKP3-211ENST00000534401 PRO0461Q9UI25 63 aa10.94□□□□□ -0.66
PKP3-211ENST00000534401 C8orf17Q9NRJ1 99 aa10.92□□□□□ -0.66
PKP3-211ENST00000534401 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
PKP3-211ENST00000534401 K7EP34 96 aa10.89□□□□□ -0.67
PKP3-211ENST00000534401 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
PKP3-211ENST00000534401 MPLKIPQ8TAP9 179 aa10.87□□□□□ -0.67
PKP3-211ENST00000534401 KRTAP10-6P60371 365 aaPredicted RBP10.86□□□□□ -0.67
PKP3-211ENST00000534401 ZCCHC13Q8WW36 166 aaKnown RBP10.85□□□□□ -0.67
PKP3-211ENST00000534401 CRCT1Q9UGL9 99 aa10.85□□□□□ -0.67
PKP3-211ENST00000534401 FSIP2Q5CZC0 6907 aa10.84□□□□□ -0.67
PKP3-211ENST00000534401 HRES1P13985 223 aa10.83□□□□□ -0.68
PKP3-211ENST00000534401 Q6ZVQ6 151 aa10.82□□□□□ -0.68
PKP3-211ENST00000534401 MMP24-AS1A0A0U1RRL7 71 aa10.81□□□□□ -0.68
PKP3-211ENST00000534401 PCP4L1A6NKN8 68 aa10.79□□□□□ -0.68
PKP3-211ENST00000534401 K7EQZ3 153 aa10.77□□□□□ -0.69
PKP3-211ENST00000534401 M0R2T5 61 aa10.77□□□□□ -0.69
PKP3-211ENST00000534401 TMEM254Q8TBM7 123 aa10.77□□□□□ -0.69
PKP3-211ENST00000534401 BPY2O14599 106 aa10.75□□□□□ -0.69
PKP3-211ENST00000534401 GTF2H5Q6ZYL4 71 aa10.75□□□□□ -0.69
PKP3-211ENST00000534401 MRPL34Q9BQ48 92 aaKnown RBP10.74□□□□□ -0.69
PKP3-211ENST00000534401 F8W1H4 67 aa10.71□□□□□ -0.69
PKP3-211ENST00000534401 SPINK7P58062 85 aa10.71□□□□□ -0.69
PKP3-211ENST00000534401 LINC00846Q9NV44 126 aa10.71□□□□□ -0.69
PKP3-211ENST00000534401 hDV103S1A0JD37 113 aa10.7□□□□□ -0.7
PKP3-211ENST00000534401 RBM12B-AS1Q9P1G2 102 aa10.69□□□□□ -0.7
PKP3-211ENST00000534401 Q8N9L7 120 aa10.63□□□□□ -0.71
PKP3-211ENST00000534401 UBL5Q9BZL1 73 aa10.63□□□□□ -0.71
PKP3-211ENST00000534401 ETDBQ3ZM63 59 aa10.62□□□□□ -0.71
PKP3-211ENST00000534401 FAM236DA0A1B0GTK5 79 aa10.61□□□□□ -0.71
PKP3-211ENST00000534401 FAM236CP0DP71 79 aa10.61□□□□□ -0.71
PKP3-211ENST00000534401 KRTAP9-8Q9BYQ0 159 aa10.59□□□□□ -0.71
PKP3-211ENST00000534401 CASC2Q6XLA1 102 aa10.57□□□□□ -0.72
PKP3-211ENST00000534401 WFDC13Q8IUB5 93 aa10.55□□□□□ -0.72
PKP3-211ENST00000534401 Q5W150 140 aa10.54□□□□□ -0.72
PKP3-211ENST00000534401 NDUFS5O43920 106 aa10.53□□□□□ -0.72
PKP3-211ENST00000534401 CXCL6P80162 114 aa10.49□□□□□ -0.73
PKP3-211ENST00000534401 HCG22E2RYF7 251 aa10.48□□□□□ -0.73
PKP3-211ENST00000534401 MT2AP02795 61 aa10.41□□□□□ -0.74
PKP3-211ENST00000534401 C7orf65Q6ZTY9 151 aa10.41□□□□□ -0.74
PKP3-211ENST00000534401 ACYP1P07311 99 aa10.4□□□□□ -0.74
PKP3-211ENST00000534401 FAM240AA0A1B0GVK7 77 aa10.39□□□□□ -0.75
PKP3-211ENST00000534401 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
PKP3-211ENST00000534401 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
PKP3-211ENST00000534401 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
PKP3-211ENST00000534401 MT1FP04733 61 aa10.32□□□□□ -0.76
PKP3-211ENST00000534401 TP53AIP1Q9HCN2 124 aa10.31□□□□□ -0.76
PKP3-211ENST00000534401 A0A1B0GV90 55 aa10.27□□□□□ -0.77
PKP3-211ENST00000534401 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
PKP3-211ENST00000534401 KRTAP9-3Q9BYQ3 159 aa10.25□□□□□ -0.77
PKP3-211ENST00000534401 KRTAP10-10P60014 251 aa10.21□□□□□ -0.77
PKP3-211ENST00000534401 C4orf26Q17RF5 130 aa10.21□□□□□ -0.77
PKP3-211ENST00000534401 KRTAP3-1Q9BYR8 98 aa10.18□□□□□ -0.78
PKP3-211ENST00000534401 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.15□□□□□ -0.78
PKP3-211ENST00000534401 LINC00643Q86TS7 51 aa10.15□□□□□ -0.78
PKP3-211ENST00000534401 LCE2BO14633 110 aa10.14□□□□□ -0.79
PKP3-211ENST00000534401 KRTAP9-7A8MTY7 169 aa10.13□□□□□ -0.79
PKP3-211ENST00000534401 USH2AO75445 5202 aa10.11□□□□□ -0.79
PKP3-211ENST00000534401 CYP4F30PQ9H0H9 118 aa10.09□□□□□ -0.79
PKP3-211ENST00000534401 TRAV22A0A0B4J277 110 aa10.08□□□□□ -0.8
PKP3-211ENST00000534401 HIST1H4AP62805 103 aaKnown RBP10.08□□□□□ -0.8
PKP3-211ENST00000534401 C1orf64Q8NEQ6 169 aa10.06□□□□□ -0.8
PKP3-211ENST00000534401 SSPOA2VEC9 5147 aa10.06□□□□□ -0.8
PKP3-211ENST00000534401 UQCRQO14949 82 aa10.04□□□□□ -0.8
PKP3-211ENST00000534401 A0A087WVE0 104 aa10.02□□□□□ -0.81
PKP3-211ENST00000534401 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.81
PKP3-211ENST00000534401 J3QR89 54 aa9.96□□□□□ -0.82
PKP3-211ENST00000534401 ATOX1O00244 68 aa9.95□□□□□ -0.82
PKP3-211ENST00000534401 S4R3F8 94 aa9.95□□□□□ -0.82
PKP3-211ENST00000534401 H0Y9P7 68 aa9.93□□□□□ -0.82
PKP3-211ENST00000534401 LCA10Q71F78 164 aa9.92□□□□□ -0.82
PKP3-211ENST00000534401 C5orf47Q569G3 176 aa9.91□□□□□ -0.82
PKP3-211ENST00000534401 OCR1Q9BZK8 76 aa9.91□□□□□ -0.82
PKP3-211ENST00000534401 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
PKP3-211ENST00000534401 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
PKP3-211ENST00000534401 FCGBPQ9Y6R7 5405 aaPredicted RBP9.89□□□□□ -0.83
PKP3-211ENST00000534401 KRTAP19-1Q8IUB9 90 aa9.85□□□□□ -0.83
PKP3-211ENST00000534401 LINC00208Q96KT6 92 aa9.79□□□□□ -0.84
PKP3-211ENST00000534401 KRTAP19-6Q3LI70 58 aa9.78□□□□□ -0.84
PKP3-211ENST00000534401 KLKP1Q107X0 134 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms