RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 Q6ZRN7 208 aaPredicted RBP10.24□□□□□ -0.77
PHRF1-206ENST00000534320 LCE6AA0A183 80 aa10.24□□□□□ -0.77
PHRF1-206ENST00000534320 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
PHRF1-206ENST00000534320 NF1P21359 2839 aa10.21□□□□□ -0.78
PHRF1-206ENST00000534320 DCHS2Q6V1P9 2916 aa10.21□□□□□ -0.78
PHRF1-206ENST00000534320 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
PHRF1-206ENST00000534320 FBN2P35556 2912 aa10.2□□□□□ -0.78
PHRF1-206ENST00000534320 A6NN06 94 aa10.16□□□□□ -0.78
PHRF1-206ENST00000534320 Q6ZSA8 131 aa10.15□□□□□ -0.78
PHRF1-206ENST00000534320 S4R3F8 94 aa10.14□□□□□ -0.79
PHRF1-206ENST00000534320 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
PHRF1-206ENST00000534320 RELNP78509 3460 aa10.13□□□□□ -0.79
PHRF1-206ENST00000534320 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
PHRF1-206ENST00000534320 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
PHRF1-206ENST00000534320 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
PHRF1-206ENST00000534320 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
PHRF1-206ENST00000534320 A0A087X002 238 aa10.09□□□□□ -0.79
PHRF1-206ENST00000534320 MXRA5Q9NR99 2828 aa10.07□□□□□ -0.8
PHRF1-206ENST00000534320 Q5VSD8 79 aa10.06□□□□□ -0.8
PHRF1-206ENST00000534320 R4GN34 69 aa10.06□□□□□ -0.8
PHRF1-206ENST00000534320 KRTAP25-1Q3LHN0 102 aa10.05□□□□□ -0.8
PHRF1-206ENST00000534320 TENM4Q6N022 2769 aa10.05□□□□□ -0.8
PHRF1-206ENST00000534320 LAMA5O15230 3695 aa10.03□□□□□ -0.8
PHRF1-206ENST00000534320 KRTAP13-1Q8IUC0 172 aa10.02□□□□□ -0.81
PHRF1-206ENST00000534320 MUC3AQ02505 3323 aa10.01□□□□□ -0.81
PHRF1-206ENST00000534320 DMDP11532 3685 aa10.01□□□□□ -0.81
PHRF1-206ENST00000534320 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
PHRF1-206ENST00000534320 ASPMQ8IZT6 3477 aa9.94□□□□□ -0.82
PHRF1-206ENST00000534320 DCHS1Q96JQ0 3298 aa9.94□□□□□ -0.82
PHRF1-206ENST00000534320 NDUFAF8A1L188 74 aa9.93□□□□□ -0.82
PHRF1-206ENST00000534320 ZFHX4Q86UP3 3567 aa9.92□□□□□ -0.82
PHRF1-206ENST00000534320 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
PHRF1-206ENST00000534320 ADM2Q7Z4H4 148 aa9.86□□□□□ -0.83
PHRF1-206ENST00000534320 KRTAP21-3Q3LHN1 58 aa9.86□□□□□ -0.83
PHRF1-206ENST00000534320 M0QZ58 72 aa9.85□□□□□ -0.83
PHRF1-206ENST00000534320 RPS29P62273 56 aaKnown RBP9.81□□□□□ -0.84
PHRF1-206ENST00000534320 PLAC4Q8WY50 150 aa9.79□□□□□ -0.84
PHRF1-206ENST00000534320 DMBT1Q9UGM3 2413 aaPredicted RBP9.78□□□□□ -0.84
PHRF1-206ENST00000534320 PDZD2O15018 2839 aa9.77□□□□□ -0.85
PHRF1-206ENST00000534320 SEC61BP60468 96 aaKnown RBP9.76□□□□□ -0.85
PHRF1-206ENST00000534320 CELSR1Q9NYQ6 3014 aa9.75□□□□□ -0.85
PHRF1-206ENST00000534320 M0R2T5 61 aa9.75□□□□□ -0.85
PHRF1-206ENST00000534320 A8MU10 97 aa9.73□□□□□ -0.85
PHRF1-206ENST00000534320 TENM3Q9P273 2699 aa9.71□□□□□ -0.86
PHRF1-206ENST00000534320 SMG1Q96Q15 3661 aaKnown RBP9.67□□□□□ -0.86
PHRF1-206ENST00000534320 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
PHRF1-206ENST00000534320 C20orf166-AS1Q96NR2 134 aa9.63□□□□□ -0.87
PHRF1-206ENST00000534320 A8MUU9 505 aa9.59□□□□□ -0.87
PHRF1-206ENST00000534320 CSMD1Q96PZ7 3565 aa9.59□□□□□ -0.87
PHRF1-206ENST00000534320 OTOGQ6ZRI0 2925 aa9.54□□□□□ -0.88
PHRF1-206ENST00000534320 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
PHRF1-206ENST00000534320 NBPF19A0A087WUL8 3843 aa9.49□□□□□ -0.89
PHRF1-206ENST00000534320 VWFP04275 2813 aa9.46□□□□□ -0.89
PHRF1-206ENST00000534320 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
PHRF1-206ENST00000534320 SVEP1Q4LDE5 3571 aa9.39□□□□□ -0.91
PHRF1-206ENST00000534320 FBN1P35555 2871 aaKnown RBP9.39□□□□□ -0.91
PHRF1-206ENST00000534320 SPENQ96T58 3664 aaKnown RBP9.37□□□□□ -0.91
PHRF1-206ENST00000534320 C10orf95Q9H7T3 257 aa9.35□□□□□ -0.91
PHRF1-206ENST00000534320 BSNQ9UPA5 3926 aa9.32□□□□□ -0.92
PHRF1-206ENST00000534320 ANK3Q12955 4377 aaKnown RBP9.31□□□□□ -0.92
PHRF1-206ENST00000534320 PKD1L1Q8TDX9 2849 aa9.29□□□□□ -0.92
PHRF1-206ENST00000534320 TNP1P09430 55 aa9.28□□□□□ -0.92
PHRF1-206ENST00000534320 TGP01266 2768 aa9.27□□□□□ -0.93
PHRF1-206ENST00000534320 PP632Q6XCG6 107 aa9.27□□□□□ -0.93
PHRF1-206ENST00000534320 ZFHX3Q15911 3703 aa9.23□□□□□ -0.93
PHRF1-206ENST00000534320 CSMD2Q7Z408 3487 aa9.22□□□□□ -0.93
PHRF1-206ENST00000534320 XP32Q5T750 250 aa9.18□□□□□ -0.94
PHRF1-206ENST00000534320 P0C880 135 aa9.18□□□□□ -0.94
PHRF1-206ENST00000534320 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
PHRF1-206ENST00000534320 H0YAA0 97 aa9.06□□□□□ -0.96
PHRF1-206ENST00000534320 CUBNO60494 3623 aa9.05□□□□□ -0.96
PHRF1-206ENST00000534320 TRRAPQ9Y4A5 3859 aa9.02□□□□□ -0.96
PHRF1-206ENST00000534320 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
PHRF1-206ENST00000534320 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
PHRF1-206ENST00000534320 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
PHRF1-206ENST00000534320 FBN3Q75N90 2809 aa8.81□□□□□ -1
PHRF1-206ENST00000534320 VPS13CQ709C8 3753 aa8.75□□□□□ -1.01
PHRF1-206ENST00000534320 MEGF8Q7Z7M0 2845 aa8.75□□□□□ -1.01
PHRF1-206ENST00000534320 HUWE1Q7Z6Z7 4374 aaKnown RBP8.66□□□□□ -1.02
PHRF1-206ENST00000534320 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
PHRF1-206ENST00000534320 ZNF469Q96JG9 3925 aaPredicted RBP8.58□□□□□ -1.04
PHRF1-206ENST00000534320 KRTAP3-1Q9BYR8 98 aa8.54□□□□□ -1.04
PHRF1-206ENST00000534320 AKAP9Q99996 3911 aa8.48□□□□□ -1.05
PHRF1-206ENST00000534320 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
PHRF1-206ENST00000534320 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
PHRF1-206ENST00000534320 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
PHRF1-206ENST00000534320 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
PHRF1-206ENST00000534320 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
PHRF1-206ENST00000534320 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
PHRF1-206ENST00000534320 DNAH9Q9NYC9 4486 aa8.33□□□□□ -1.08
PHRF1-206ENST00000534320 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
PHRF1-206ENST00000534320 KRTAP12-1P59990 96 aa8.24□□□□□ -1.09
PHRF1-206ENST00000534320 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
PHRF1-206ENST00000534320 ALMS1Q8TCU4 4167 aa8.2□□□□□ -1.1
PHRF1-206ENST00000534320 INE1O15225 51 aa8.19□□□□□ -1.1
PHRF1-206ENST00000534320 CSMD3Q7Z407 3707 aa8.14□□□□□ -1.11
PHRF1-206ENST00000534320 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
PHRF1-206ENST00000534320 KRTAP4-5Q9BYR2 181 aa8.08□□□□□ -1.12
PHRF1-206ENST00000534320 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
PHRF1-206ENST00000534320 DNAH1Q9P2D7 4330 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms