RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 C8orf87E5RJ46 101 aa8.67□□□□□ -1.02
UBXN1-216ENST00000533908 TMEM256-PLSCR3K7ERE1 68 aa8.67□□□□□ -1.02
UBXN1-216ENST00000533908 DNAL4O96015 105 aa8.67□□□□□ -1.02
UBXN1-216ENST00000533908 H3BQ85 93 aa8.65□□□□□ -1.02
UBXN1-216ENST00000533908 VAMP8Q9BV40 100 aa8.65□□□□□ -1.02
UBXN1-216ENST00000533908 LINC00846Q9NV44 126 aa8.64□□□□□ -1.03
UBXN1-216ENST00000533908 K7ERJ3 54 aa8.63□□□□□ -1.03
UBXN1-216ENST00000533908 UBE2V1Q13404 147 aa8.63□□□□□ -1.03
UBXN1-216ENST00000533908 PSMB2P49721 201 aa8.62□□□□□ -1.03
UBXN1-216ENST00000533908 VPS25Q9BRG1 176 aa8.62□□□□□ -1.03
UBXN1-216ENST00000533908 A8MWP4 228 aa8.59□□□□□ -1.03
UBXN1-216ENST00000533908 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
UBXN1-216ENST00000533908 S100A1P23297 94 aa8.58□□□□□ -1.04
UBXN1-216ENST00000533908 WFDC13Q8IUB5 93 aa8.57□□□□□ -1.04
UBXN1-216ENST00000533908 COX6CP09669 75 aa8.56□□□□□ -1.04
UBXN1-216ENST00000533908 RBM3P98179 157 aaKnown RBP8.56□□□□□ -1.04
UBXN1-216ENST00000533908 KRTAP6-3Q3LI67 103 aa8.55□□□□□ -1.04
UBXN1-216ENST00000533908 J3KT08 172 aa8.54□□□□□ -1.04
UBXN1-216ENST00000533908 HSD52Q0P140 79 aa8.53□□□□□ -1.04
UBXN1-216ENST00000533908 Q6ZQT0 140 aa8.53□□□□□ -1.04
UBXN1-216ENST00000533908 DSCR8Q96T75 97 aa8.52□□□□□ -1.05
UBXN1-216ENST00000533908 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
UBXN1-216ENST00000533908 C9JAW5 83 aa8.47□□□□□ -1.05
UBXN1-216ENST00000533908 NDUFB1O75438 58 aa8.47□□□□□ -1.05
UBXN1-216ENST00000533908 BAALC-AS2P0C853 105 aa8.47□□□□□ -1.05
UBXN1-216ENST00000533908 IGKV3D-7A0A0C4DH55 119 aa8.46□□□□□ -1.06
UBXN1-216ENST00000533908 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
UBXN1-216ENST00000533908 SCGB1C2P0DMR2 95 aa8.44□□□□□ -1.06
UBXN1-216ENST00000533908 PYY3Q5JQD4 70 aa8.44□□□□□ -1.06
UBXN1-216ENST00000533908 C21orf62-AS1Q17RA5 79 aa8.43□□□□□ -1.06
UBXN1-216ENST00000533908 H1FX-AS1Q4G0G2 97 aa8.41□□□□□ -1.06
UBXN1-216ENST00000533908 Q6ZVQ6 151 aa8.41□□□□□ -1.06
UBXN1-216ENST00000533908 PRR15Q8IV56 129 aa8.36□□□□□ -1.07
UBXN1-216ENST00000533908 LOC110117498A0A087WWA1 95 aa8.34□□□□□ -1.07
UBXN1-216ENST00000533908 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
UBXN1-216ENST00000533908 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
UBXN1-216ENST00000533908 A0A1B0GW54 56 aa8.32□□□□□ -1.08
UBXN1-216ENST00000533908 MRPL34Q9BQ48 92 aaKnown RBP8.32□□□□□ -1.08
UBXN1-216ENST00000533908 TMEM254Q8TBM7 123 aa8.31□□□□□ -1.08
UBXN1-216ENST00000533908 JMJD7-PLA2G4BH0Y9G9 81 aa8.3□□□□□ -1.08
UBXN1-216ENST00000533908 C14orf132Q9NPU4 83 aa8.28□□□□□ -1.08
UBXN1-216ENST00000533908 NEBP20929 6669 aa8.28□□□□□ -1.08
UBXN1-216ENST00000533908 Q5W150 140 aa8.27□□□□□ -1.09
UBXN1-216ENST00000533908 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
UBXN1-216ENST00000533908 PDE6GP18545 87 aa8.25□□□□□ -1.09
UBXN1-216ENST00000533908 NREPQ16612 68 aa8.25□□□□□ -1.09
UBXN1-216ENST00000533908 IGKV2D-30A0A075B6S6 120 aa8.24□□□□□ -1.09
UBXN1-216ENST00000533908 hDV103S1A0JD37 113 aa8.24□□□□□ -1.09
UBXN1-216ENST00000533908 IGKV2-30P06310 120 aa8.24□□□□□ -1.09
UBXN1-216ENST00000533908 ATXN8Q156A1 80 aa8.24□□□□□ -1.09
UBXN1-216ENST00000533908 NDUFS5O43920 106 aa8.23□□□□□ -1.09
UBXN1-216ENST00000533908 K7EQZ3 153 aa8.22□□□□□ -1.09
UBXN1-216ENST00000533908 MT1BP07438 61 aa8.22□□□□□ -1.09
UBXN1-216ENST00000533908 A6NN06 94 aa8.18□□□□□ -1.1
UBXN1-216ENST00000533908 C4orf26Q17RF5 130 aa8.18□□□□□ -1.1
UBXN1-216ENST00000533908 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
UBXN1-216ENST00000533908 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
UBXN1-216ENST00000533908 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
UBXN1-216ENST00000533908 KRTAP19-8Q3LI54 63 aa8.12□□□□□ -1.11
UBXN1-216ENST00000533908 KRTAP3-1Q9BYR8 98 aa8.11□□□□□ -1.11
UBXN1-216ENST00000533908 Q5VV11 94 aa8.09□□□□□ -1.11
UBXN1-216ENST00000533908 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
UBXN1-216ENST00000533908 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
UBXN1-216ENST00000533908 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
UBXN1-216ENST00000533908 M0R143 59 aa8.07□□□□□ -1.12
UBXN1-216ENST00000533908 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
UBXN1-216ENST00000533908 Q8N9L7 120 aa8.07□□□□□ -1.12
UBXN1-216ENST00000533908 HCG22E2RYF7 251 aa8.06□□□□□ -1.12
UBXN1-216ENST00000533908 BPY2O14599 106 aa8.06□□□□□ -1.12
UBXN1-216ENST00000533908 KRTAP20-1Q3LI63 56 aa8.06□□□□□ -1.12
UBXN1-216ENST00000533908 TMA7Q9Y2S6 64 aaKnown RBP8.05□□□□□ -1.12
UBXN1-216ENST00000533908 CASC2Q6XLA1 102 aa8.04□□□□□ -1.12
UBXN1-216ENST00000533908 KRTAP5-9P26371 169 aa8.01□□□□□ -1.13
UBXN1-216ENST00000533908 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
UBXN1-216ENST00000533908 LCA10Q71F78 164 aa7.99□□□□□ -1.13
UBXN1-216ENST00000533908 S4R3F8 94 aa7.99□□□□□ -1.13
UBXN1-216ENST00000533908 CXCL6P80162 114 aa7.97□□□□□ -1.13
UBXN1-216ENST00000533908 H3BT86 120 aa7.95□□□□□ -1.14
UBXN1-216ENST00000533908 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
UBXN1-216ENST00000533908 KMT2DO14686 5537 aa7.92□□□□□ -1.14
UBXN1-216ENST00000533908 KLKP1Q107X0 134 aa7.92□□□□□ -1.14
UBXN1-216ENST00000533908 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
UBXN1-216ENST00000533908 BATFQ16520 125 aa7.88□□□□□ -1.15
UBXN1-216ENST00000533908 TSTD3H0UI37 97 aa7.87□□□□□ -1.15
UBXN1-216ENST00000533908 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
UBXN1-216ENST00000533908 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
UBXN1-216ENST00000533908 TAX1BP3O14907 124 aa7.84□□□□□ -1.15
UBXN1-216ENST00000533908 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
UBXN1-216ENST00000533908 MDN1Q9NU22 5596 aa7.83□□□□□ -1.16
UBXN1-216ENST00000533908 A0A087WVE0 104 aa7.8□□□□□ -1.16
UBXN1-216ENST00000533908 KRTAP2-3P0C7H8 128 aa7.77□□□□□ -1.17
UBXN1-216ENST00000533908 KRTAP2-4Q9BYR9 128 aa7.77□□□□□ -1.17
UBXN1-216ENST00000533908 IMUPQ9GZP8 106 aa7.77□□□□□ -1.17
UBXN1-216ENST00000533908 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
UBXN1-216ENST00000533908 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
UBXN1-216ENST00000533908 UBL5Q9BZL1 73 aa7.73□□□□□ -1.17
UBXN1-216ENST00000533908 CYP4F30PQ9H0H9 118 aa7.7□□□□□ -1.18
UBXN1-216ENST00000533908 TP53AIP1Q9HCN2 124 aa7.7□□□□□ -1.18
UBXN1-216ENST00000533908 SPCS1Q9Y6A9 102 aa7.69□□□□□ -1.18
UBXN1-216ENST00000533908 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms