RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
CTSB-228ENST00000533455 A0A087X002 238 aa9.86□□□□□ -0.83
CTSB-228ENST00000533455 RTL8CO15255 209 aa9.86□□□□□ -0.83
CTSB-228ENST00000533455 NOTCH2NLQ7Z3S9 236 aa9.86□□□□□ -0.83
CTSB-228ENST00000533455 HRES1P13985 223 aa9.84□□□□□ -0.83
CTSB-228ENST00000533455 DNAH17Q9UFH2 4485 aa9.84□□□□□ -0.83
CTSB-228ENST00000533455 LCA10Q71F78 164 aa9.83□□□□□ -0.84
CTSB-228ENST00000533455 ANAPC11Q9NYG5 84 aa9.83□□□□□ -0.84
CTSB-228ENST00000533455 HECTD4Q9Y4D8 3996 aa9.83□□□□□ -0.84
CTSB-228ENST00000533455 A6NED7 52 aa9.82□□□□□ -0.84
CTSB-228ENST00000533455 SEC61GP60059 68 aa9.81□□□□□ -0.84
CTSB-228ENST00000533455 KRTAP13-3Q3SY46 172 aa9.81□□□□□ -0.84
CTSB-228ENST00000533455 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
CTSB-228ENST00000533455 SPAG11AQ6PDA7 123 aa9.8□□□□□ -0.84
CTSB-228ENST00000533455 CDC42SE1Q9NRR8 79 aa9.79□□□□□ -0.84
CTSB-228ENST00000533455 STARD9Q9P2P6 4700 aa9.77□□□□□ -0.84
CTSB-228ENST00000533455 Q5W150 140 aa9.76□□□□□ -0.85
CTSB-228ENST00000533455 IGLV7-43P04211 117 aa9.75□□□□□ -0.85
CTSB-228ENST00000533455 FRAS1Q86XX4 4008 aa9.75□□□□□ -0.85
CTSB-228ENST00000533455 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
CTSB-228ENST00000533455 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
CTSB-228ENST00000533455 SPTSSBQ8NFR3 76 aa9.73□□□□□ -0.85
CTSB-228ENST00000533455 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
CTSB-228ENST00000533455 A6NN06 94 aa9.7□□□□□ -0.86
CTSB-228ENST00000533455 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
CTSB-228ENST00000533455 ALMS1Q8TCU4 4167 aa9.69□□□□□ -0.86
CTSB-228ENST00000533455 CIRBP-AS1Q8TBR5 109 aa9.69□□□□□ -0.86
CTSB-228ENST00000533455 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
CTSB-228ENST00000533455 SPINK7P58062 85 aa9.66□□□□□ -0.86
CTSB-228ENST00000533455 ACYP2P14621 99 aa9.65□□□□□ -0.86
CTSB-228ENST00000533455 FBN3Q75N90 2809 aa9.65□□□□□ -0.86
CTSB-228ENST00000533455 PRR26Q8N8Z3 221 aa9.65□□□□□ -0.87
CTSB-228ENST00000533455 DMAC1Q96GE9 116 aa9.63□□□□□ -0.87
CTSB-228ENST00000533455 C1orf134Q5TEV5 83 aa9.62□□□□□ -0.87
CTSB-228ENST00000533455 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
CTSB-228ENST00000533455 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
CTSB-228ENST00000533455 TGP01266 2768 aa9.6□□□□□ -0.87
CTSB-228ENST00000533455 LINC00313P59037 77 aa9.6□□□□□ -0.87
CTSB-228ENST00000533455 IGKV2-30P06310 120 aa9.56□□□□□ -0.88
CTSB-228ENST00000533455 KRTAP21-3Q3LHN1 58 aa9.55□□□□□ -0.88
CTSB-228ENST00000533455 DNAH6Q9C0G6 4158 aa9.55□□□□□ -0.88
CTSB-228ENST00000533455 DNAH11Q96DT5 4516 aa9.54□□□□□ -0.88
CTSB-228ENST00000533455 C7orf65Q6ZTY9 151 aa9.53□□□□□ -0.88
CTSB-228ENST00000533455 KRTAP13-2Q52LG2 175 aa9.52□□□□□ -0.89
CTSB-228ENST00000533455 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
CTSB-228ENST00000533455 DNAH5Q8TE73 4624 aa9.5□□□□□ -0.89
CTSB-228ENST00000533455 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
CTSB-228ENST00000533455 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
CTSB-228ENST00000533455 KRTAP10-2P60368 255 aa9.46□□□□□ -0.9
CTSB-228ENST00000533455 A0A1B0GU69 56 aa9.43□□□□□ -0.9
CTSB-228ENST00000533455 LY6G6CO95867 125 aa9.43□□□□□ -0.9
CTSB-228ENST00000533455 Q6ZSA8 131 aa9.43□□□□□ -0.9
CTSB-228ENST00000533455 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
CTSB-228ENST00000533455 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
CTSB-228ENST00000533455 KRTAP10-1P60331 282 aa9.36□□□□□ -0.91
CTSB-228ENST00000533455 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
CTSB-228ENST00000533455 LRP1BQ9NZR2 4599 aa9.32□□□□□ -0.92
CTSB-228ENST00000533455 PKD1P98161 4303 aa9.3□□□□□ -0.92
CTSB-228ENST00000533455 UQCR11O14957 56 aa9.3□□□□□ -0.92
CTSB-228ENST00000533455 MIR22HGQ0VDD5 57 aa9.29□□□□□ -0.92
CTSB-228ENST00000533455 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.92
CTSB-228ENST00000533455 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.93
CTSB-228ENST00000533455 SPINK1P00995 79 aa9.27□□□□□ -0.93
CTSB-228ENST00000533455 PLA2G1BP04054 148 aaKnown RBP9.27□□□□□ -0.93
CTSB-228ENST00000533455 TYMSOSQ8TAI1 123 aa9.25□□□□□ -0.93
CTSB-228ENST00000533455 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
CTSB-228ENST00000533455 VPS13BQ7Z7G8 4022 aa9.22□□□□□ -0.93
CTSB-228ENST00000533455 RPS29P62273 56 aaKnown RBP9.19□□□□□ -0.94
CTSB-228ENST00000533455 PRAC1Q96KF2 57 aa9.19□□□□□ -0.94
CTSB-228ENST00000533455 SACSQ9NZJ4 4579 aa9.16□□□□□ -0.94
CTSB-228ENST00000533455 ADM2Q7Z4H4 148 aa9.15□□□□□ -0.94
CTSB-228ENST00000533455 Q8N1X5 172 aa9.13□□□□□ -0.95
CTSB-228ENST00000533455 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
CTSB-228ENST00000533455 A8MUU9 505 aa9.04□□□□□ -0.96
CTSB-228ENST00000533455 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
CTSB-228ENST00000533455 PKHD1L1Q86WI1 4243 aa8.99□□□□□ -0.97
CTSB-228ENST00000533455 LINC01554Q52M75 96 aa8.99□□□□□ -0.97
CTSB-228ENST00000533455 PKHD1P08F94 4074 aa8.99□□□□□ -0.97
CTSB-228ENST00000533455 KMT2CQ8NEZ4 4911 aaKnown RBP8.97□□□□□ -0.97
CTSB-228ENST00000533455 KRTAP3-1Q9BYR8 98 aa8.96□□□□□ -0.98
CTSB-228ENST00000533455 H0YAA0 97 aa8.95□□□□□ -0.98
CTSB-228ENST00000533455 C9orf92A6NGG3 77 aa8.94□□□□□ -0.98
CTSB-228ENST00000533455 CSAG1Q6PB30 78 aa8.92□□□□□ -0.98
CTSB-228ENST00000533455 RYR2Q92736 4967 aa8.92□□□□□ -0.98
CTSB-228ENST00000533455 APOBP04114 4563 aaKnown RBP8.88□□□□□ -0.99
CTSB-228ENST00000533455 A0A1B0GU33 70 aa8.88□□□□□ -0.99
CTSB-228ENST00000533455 DYNC1H1Q14204 4646 aaKnown RBP8.87□□□□□ -0.99
CTSB-228ENST00000533455 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
CTSB-228ENST00000533455 SMR3BP02814 79 aaPredicted RBP8.85□□□□□ -0.99
CTSB-228ENST00000533455 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
CTSB-228ENST00000533455 COX6B2Q6YFQ2 88 aa8.8□□□□□ -1
CTSB-228ENST00000533455 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
CTSB-228ENST00000533455 RYR3Q15413 4870 aa8.75□□□□□ -1.01
CTSB-228ENST00000533455 FAT1Q14517 4588 aa8.73□□□□□ -1.01
CTSB-228ENST00000533455 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.02
CTSB-228ENST00000533455 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
CTSB-228ENST00000533455 K7ERS5 55 aa8.64□□□□□ -1.03
CTSB-228ENST00000533455 FAT3Q8TDW7 4589 aa8.6□□□□□ -1.03
CTSB-228ENST00000533455 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
CTSB-228ENST00000533455 TNXBP22105 4242 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms