RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
SMPD1-209ENST00000533196 RBM12B-AS1Q9P1G2 102 aa11.82□□□□□ -0.52
SMPD1-209ENST00000533196 FAM236DA0A1B0GTK5 79 aa11.81□□□□□ -0.52
SMPD1-209ENST00000533196 JMJD7-PLA2G4BH0Y9G9 81 aa11.81□□□□□ -0.52
SMPD1-209ENST00000533196 FAM236CP0DP71 79 aa11.81□□□□□ -0.52
SMPD1-209ENST00000533196 Q6ZQT0 140 aa11.81□□□□□ -0.52
SMPD1-209ENST00000533196 A0A1B0GW54 56 aa11.8□□□□□ -0.52
SMPD1-209ENST00000533196 MPLKIPQ8TAP9 179 aa11.8□□□□□ -0.52
SMPD1-209ENST00000533196 HRES1P13985 223 aa11.79□□□□□ -0.52
SMPD1-209ENST00000533196 KRTAP9-8Q9BYQ0 159 aa11.77□□□□□ -0.53
SMPD1-209ENST00000533196 NDUFB1O75438 58 aa11.76□□□□□ -0.53
SMPD1-209ENST00000533196 PDE6GP18545 87 aa11.75□□□□□ -0.53
SMPD1-209ENST00000533196 LOC110117498A0A087WWA1 95 aa11.74□□□□□ -0.53
SMPD1-209ENST00000533196 ZCCHC13Q8WW36 166 aaKnown RBP11.72□□□□□ -0.53
SMPD1-209ENST00000533196 LYRM7Q5U5X0 104 aa11.71□□□□□ -0.53
SMPD1-209ENST00000533196 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
SMPD1-209ENST00000533196 SMIM6P0DI80 62 aa11.69□□□□□ -0.54
SMPD1-209ENST00000533196 Q8N9P0 234 aaPredicted RBP11.69□□□□□ -0.54
SMPD1-209ENST00000533196 MTURNQ8N3F0 131 aa11.68□□□□□ -0.54
SMPD1-209ENST00000533196 A8MWP4 228 aa11.67□□□□□ -0.54
SMPD1-209ENST00000533196 C8orf17Q9NRJ1 99 aa11.64□□□□□ -0.55
SMPD1-209ENST00000533196 SPINK7P58062 85 aa11.62□□□□□ -0.55
SMPD1-209ENST00000533196 C14orf132Q9NPU4 83 aa11.62□□□□□ -0.55
SMPD1-209ENST00000533196 IGKV3D-7A0A0C4DH55 119 aa11.59□□□□□ -0.55
SMPD1-209ENST00000533196 MT2AP02795 61 aa11.59□□□□□ -0.55
SMPD1-209ENST00000533196 TSTD3H0UI37 97 aa11.58□□□□□ -0.56
SMPD1-209ENST00000533196 NREPQ16612 68 aa11.56□□□□□ -0.56
SMPD1-209ENST00000533196 USH2AO75445 5202 aa11.55□□□□□ -0.56
SMPD1-209ENST00000533196 Q6ZVQ6 151 aa11.55□□□□□ -0.56
SMPD1-209ENST00000533196 PRR15Q8IV56 129 aa11.55□□□□□ -0.56
SMPD1-209ENST00000533196 SSPOA2VEC9 5147 aa11.5□□□□□ -0.57
SMPD1-209ENST00000533196 BATFQ16520 125 aa11.5□□□□□ -0.57
SMPD1-209ENST00000533196 H3BT86 120 aa11.49□□□□□ -0.57
SMPD1-209ENST00000533196 MT1FP04733 61 aa11.49□□□□□ -0.57
SMPD1-209ENST00000533196 TMEM254Q8TBM7 123 aa11.48□□□□□ -0.57
SMPD1-209ENST00000533196 C9orf118A6NHY6 69 aa11.47□□□□□ -0.57
SMPD1-209ENST00000533196 MRPL34Q9BQ48 92 aaKnown RBP11.46□□□□□ -0.57
SMPD1-209ENST00000533196 MMP24-AS1A0A0U1RRL7 71 aa11.44□□□□□ -0.58
SMPD1-209ENST00000533196 KRTAP10-10P60014 251 aa11.44□□□□□ -0.58
SMPD1-209ENST00000533196 WFDC13Q8IUB5 93 aa11.44□□□□□ -0.58
SMPD1-209ENST00000533196 KRTAP9-3Q9BYQ3 159 aa11.42□□□□□ -0.58
SMPD1-209ENST00000533196 A0A1W2PPM0 123 aa11.4□□□□□ -0.58
SMPD1-209ENST00000533196 hDV103S1A0JD37 113 aa11.39□□□□□ -0.59
SMPD1-209ENST00000533196 TAX1BP3O14907 124 aa11.39□□□□□ -0.59
SMPD1-209ENST00000533196 K7EQZ3 153 aa11.37□□□□□ -0.59
SMPD1-209ENST00000533196 LCE2BO14633 110 aa11.35□□□□□ -0.59
SMPD1-209ENST00000533196 BPY2O14599 106 aa11.34□□□□□ -0.59
SMPD1-209ENST00000533196 NDUFS5O43920 106 aa11.32□□□□□ -0.6
SMPD1-209ENST00000533196 LOC105371267A0A1B0GV96 52 aa11.29□□□□□ -0.6
SMPD1-209ENST00000533196 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.28□□□□□ -0.6
SMPD1-209ENST00000533196 H1FX-AS1Q4G0G2 97 aa11.24□□□□□ -0.61
SMPD1-209ENST00000533196 SPCS1Q9Y6A9 102 aa11.24□□□□□ -0.61
SMPD1-209ENST00000533196 C7orf65Q6ZTY9 151 aa11.21□□□□□ -0.61
SMPD1-209ENST00000533196 KRTAP19-1Q8IUB9 90 aa11.2□□□□□ -0.62
SMPD1-209ENST00000533196 FCGBPQ9Y6R7 5405 aaPredicted RBP11.19□□□□□ -0.62
SMPD1-209ENST00000533196 CASC2Q6XLA1 102 aa11.19□□□□□ -0.62
SMPD1-209ENST00000533196 IGKV2D-30A0A075B6S6 120 aa11.18□□□□□ -0.62
SMPD1-209ENST00000533196 IGKV2-30P06310 120 aa11.18□□□□□ -0.62
SMPD1-209ENST00000533196 Q5W150 140 aa11.18□□□□□ -0.62
SMPD1-209ENST00000533196 KRTAP9-7A8MTY7 169 aa11.16□□□□□ -0.62
SMPD1-209ENST00000533196 SMCPP49901 116 aaPredicted RBP11.16□□□□□ -0.62
SMPD1-209ENST00000533196 Q8N9L7 120 aa11.15□□□□□ -0.62
SMPD1-209ENST00000533196 HCG22E2RYF7 251 aa11.13□□□□□ -0.63
SMPD1-209ENST00000533196 CXCL6P80162 114 aa11.12□□□□□ -0.63
SMPD1-209ENST00000533196 LINC00846Q9NV44 126 aa11.12□□□□□ -0.63
SMPD1-209ENST00000533196 COL5A1-AS1Q5SY13 56 aa11.1□□□□□ -0.63
SMPD1-209ENST00000533196 UBL5Q9BZL1 73 aa11.1□□□□□ -0.63
SMPD1-209ENST00000533196 PRO0461Q9UI25 63 aa11.06□□□□□ -0.64
SMPD1-209ENST00000533196 K7EP34 96 aa11.03□□□□□ -0.64
SMPD1-209ENST00000533196 KRTAP19-6Q3LI70 58 aa11.03□□□□□ -0.64
SMPD1-209ENST00000533196 C4orf26Q17RF5 130 aa10.99□□□□□ -0.65
SMPD1-209ENST00000533196 GTF2H5Q6ZYL4 71 aa10.91□□□□□ -0.66
SMPD1-209ENST00000533196 TP53AIP1Q9HCN2 124 aa10.9□□□□□ -0.66
SMPD1-209ENST00000533196 MACF1Q9UPN3 7388 aaKnown RBP10.86□□□□□ -0.67
SMPD1-209ENST00000533196 F8W1H4 67 aa10.86□□□□□ -0.67
SMPD1-209ENST00000533196 KRTAP3-1Q9BYR8 98 aa10.82□□□□□ -0.68
SMPD1-209ENST00000533196 C1orf64Q8NEQ6 169 aa10.81□□□□□ -0.68
SMPD1-209ENST00000533196 C5orf47Q569G3 176 aa10.8□□□□□ -0.68
SMPD1-209ENST00000533196 S4R3F8 94 aa10.8□□□□□ -0.68
SMPD1-209ENST00000533196 ETDBQ3ZM63 59 aa10.79□□□□□ -0.68
SMPD1-209ENST00000533196 CSAG1Q6PB30 78 aa10.77□□□□□ -0.69
SMPD1-209ENST00000533196 SYNE2Q8WXH0 6885 aaKnown RBP10.73□□□□□ -0.69
SMPD1-209ENST00000533196 FAM236AA0A1B0GUQ0 79 aa10.73□□□□□ -0.69
SMPD1-209ENST00000533196 FAM236BA0A1B0GV22 79 aa10.73□□□□□ -0.69
SMPD1-209ENST00000533196 LCA10Q71F78 164 aa10.7□□□□□ -0.7
SMPD1-209ENST00000533196 CYP4F30PQ9H0H9 118 aa10.65□□□□□ -0.7
SMPD1-209ENST00000533196 ACYP1P07311 99 aa10.64□□□□□ -0.71
SMPD1-209ENST00000533196 PCP4L1A6NKN8 68 aa10.63□□□□□ -0.71
SMPD1-209ENST00000533196 TRAV22A0A0B4J277 110 aa10.6□□□□□ -0.71
SMPD1-209ENST00000533196 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
SMPD1-209ENST00000533196 SPRR2GQ9BYE4 73 aa10.59□□□□□ -0.71
SMPD1-209ENST00000533196 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
SMPD1-209ENST00000533196 FAM240AA0A1B0GVK7 77 aa10.56□□□□□ -0.72
SMPD1-209ENST00000533196 KRTAP6-3Q3LI67 103 aa10.56□□□□□ -0.72
SMPD1-209ENST00000533196 KRTAP19-8Q3LI54 63 aa10.55□□□□□ -0.72
SMPD1-209ENST00000533196 Q5VV11 94 aa10.55□□□□□ -0.72
SMPD1-209ENST00000533196 KLKP1Q107X0 134 aa10.54□□□□□ -0.72
SMPD1-209ENST00000533196 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
SMPD1-209ENST00000533196 MT1BP07438 61 aa10.53□□□□□ -0.72
SMPD1-209ENST00000533196 UQCRQO14949 82 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms