RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 FAM236AA0A1B0GUQ0 79 aa8.18□□□□□ -1.1
TRIM3-212ENST00000533064 FAM236BA0A1B0GV22 79 aa8.18□□□□□ -1.1
TRIM3-212ENST00000533064 Q5XG85 94 aa8.17□□□□□ -1.1
TRIM3-212ENST00000533064 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
TRIM3-212ENST00000533064 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
TRIM3-212ENST00000533064 DSCR10P59022 87 aa8.14□□□□□ -1.11
TRIM3-212ENST00000533064 PCLOQ9Y6V0 5065 aa8.13□□□□□ -1.11
TRIM3-212ENST00000533064 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
TRIM3-212ENST00000533064 Q8N9L7 120 aa8.13□□□□□ -1.11
TRIM3-212ENST00000533064 DEFB116Q30KQ4 102 aa8.11□□□□□ -1.11
TRIM3-212ENST00000533064 ATOX1O00244 68 aa8.09□□□□□ -1.11
TRIM3-212ENST00000533064 Q96NJ1 140 aa8.09□□□□□ -1.11
TRIM3-212ENST00000533064 K7EQZ3 153 aa8.08□□□□□ -1.12
TRIM3-212ENST00000533064 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
TRIM3-212ENST00000533064 COX7CP15954 63 aa8.07□□□□□ -1.12
TRIM3-212ENST00000533064 TMEM258P61165 79 aa8.07□□□□□ -1.12
TRIM3-212ENST00000533064 A8MWP4 228 aa8.06□□□□□ -1.12
TRIM3-212ENST00000533064 RETNLBQ9BQ08 111 aa8.05□□□□□ -1.12
TRIM3-212ENST00000533064 PRR15Q8IV56 129 aa8.04□□□□□ -1.12
TRIM3-212ENST00000533064 NDUFB1O75438 58 aa8.02□□□□□ -1.13
TRIM3-212ENST00000533064 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
TRIM3-212ENST00000533064 HCG22E2RYF7 251 aa8□□□□□ -1.13
TRIM3-212ENST00000533064 PRR4Q16378 134 aa7.98□□□□□ -1.13
TRIM3-212ENST00000533064 SERP2Q8N6R1 65 aa7.98□□□□□ -1.13
TRIM3-212ENST00000533064 A0A1B0GVX0 72 aa7.96□□□□□ -1.13
TRIM3-212ENST00000533064 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
TRIM3-212ENST00000533064 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
TRIM3-212ENST00000533064 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
TRIM3-212ENST00000533064 IGHV6-1A0A0B4J1U7 121 aa7.93□□□□□ -1.14
TRIM3-212ENST00000533064 MMP24-AS1A0A0U1RRL7 71 aa7.93□□□□□ -1.14
TRIM3-212ENST00000533064 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
TRIM3-212ENST00000533064 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
TRIM3-212ENST00000533064 OCR1Q9BZK8 76 aa7.92□□□□□ -1.14
TRIM3-212ENST00000533064 C8orf17Q9NRJ1 99 aa7.92□□□□□ -1.14
TRIM3-212ENST00000533064 hDV103S1A0JD37 113 aa7.9□□□□□ -1.14
TRIM3-212ENST00000533064 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
TRIM3-212ENST00000533064 LINC00313P59037 77 aa7.89□□□□□ -1.15
TRIM3-212ENST00000533064 HERC1Q15751 4861 aa7.88□□□□□ -1.15
TRIM3-212ENST00000533064 C9orf92A6NGG3 77 aa7.86□□□□□ -1.15
TRIM3-212ENST00000533064 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
TRIM3-212ENST00000533064 TPRXLQ17RH7 258 aa7.85□□□□□ -1.15
TRIM3-212ENST00000533064 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
TRIM3-212ENST00000533064 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
TRIM3-212ENST00000533064 C4orf26Q17RF5 130 aa7.83□□□□□ -1.16
TRIM3-212ENST00000533064 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
TRIM3-212ENST00000533064 SERP1Q9Y6X1 66 aa7.82□□□□□ -1.16
TRIM3-212ENST00000533064 C20orf197Q8N268 126 aa7.81□□□□□ -1.16
TRIM3-212ENST00000533064 TP53AIP1Q9HCN2 124 aa7.79□□□□□ -1.16
TRIM3-212ENST00000533064 KLKP1Q107X0 134 aa7.77□□□□□ -1.17
TRIM3-212ENST00000533064 FAM236DA0A1B0GTK5 79 aa7.76□□□□□ -1.17
TRIM3-212ENST00000533064 NDUFS5O43920 106 aa7.76□□□□□ -1.17
TRIM3-212ENST00000533064 FAM236CP0DP71 79 aa7.76□□□□□ -1.17
TRIM3-212ENST00000533064 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
TRIM3-212ENST00000533064 LPAP08519 4548 aa7.75□□□□□ -1.17
TRIM3-212ENST00000533064 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
TRIM3-212ENST00000533064 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
TRIM3-212ENST00000533064 XP32Q5T750 250 aa7.75□□□□□ -1.17
TRIM3-212ENST00000533064 A0A0U1RQV1 116 aa7.74□□□□□ -1.17
TRIM3-212ENST00000533064 ATP5EP56381 51 aaPredicted RBP7.74□□□□□ -1.17
TRIM3-212ENST00000533064 SNURFQ9Y675 71 aa7.74□□□□□ -1.17
TRIM3-212ENST00000533064 MP68P56378 58 aa7.73□□□□□ -1.17
TRIM3-212ENST00000533064 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
TRIM3-212ENST00000533064 V9GYY9 64 aa7.73□□□□□ -1.17
TRIM3-212ENST00000533064 H0Y9P7 68 aa7.72□□□□□ -1.17
TRIM3-212ENST00000533064 TRAV22A0A0B4J277 110 aa7.71□□□□□ -1.18
TRIM3-212ENST00000533064 SEC61GP60059 68 aa7.71□□□□□ -1.18
TRIM3-212ENST00000533064 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
TRIM3-212ENST00000533064 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
TRIM3-212ENST00000533064 H3BPC8 53 aa7.7□□□□□ -1.18
TRIM3-212ENST00000533064 Q75L30 129 aa7.7□□□□□ -1.18
TRIM3-212ENST00000533064 A8MUU9 505 aa7.7□□□□□ -1.18
TRIM3-212ENST00000533064 NDUFC1O43677 76 aa7.69□□□□□ -1.18
TRIM3-212ENST00000533064 LRP2P98164 4655 aa7.68□□□□□ -1.18
TRIM3-212ENST00000533064 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
TRIM3-212ENST00000533064 RPL37P61927 97 aaKnown RBP7.67□□□□□ -1.18
TRIM3-212ENST00000533064 H7BZZ5 65 aa7.67□□□□□ -1.18
TRIM3-212ENST00000533064 LINC00208Q96KT6 92 aa7.67□□□□□ -1.18
TRIM3-212ENST00000533064 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
TRIM3-212ENST00000533064 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
TRIM3-212ENST00000533064 Q5W150 140 aa7.63□□□□□ -1.19
TRIM3-212ENST00000533064 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
TRIM3-212ENST00000533064 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
TRIM3-212ENST00000533064 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
TRIM3-212ENST00000533064 LOC101927531A0A1B0GV80 90 aa7.57□□□□□ -1.2
TRIM3-212ENST00000533064 PCOTHQ58A44 107 aa7.57□□□□□ -1.2
TRIM3-212ENST00000533064 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
TRIM3-212ENST00000533064 CYP4F30PQ9H0H9 118 aa7.51□□□□□ -1.21
TRIM3-212ENST00000533064 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
TRIM3-212ENST00000533064 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
TRIM3-212ENST00000533064 MUC17Q685J3 4493 aa7.48□□□□□ -1.21
TRIM3-212ENST00000533064 PMAIP1Q13794 54 aa7.46□□□□□ -1.22
TRIM3-212ENST00000533064 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
TRIM3-212ENST00000533064 C7orf65Q6ZTY9 151 aa7.44□□□□□ -1.22
TRIM3-212ENST00000533064 SPINK7P58062 85 aa7.42□□□□□ -1.22
TRIM3-212ENST00000533064 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
TRIM3-212ENST00000533064 HRES1P13985 223 aa7.38□□□□□ -1.23
TRIM3-212ENST00000533064 Q1T7F1 81 aa7.38□□□□□ -1.23
TRIM3-212ENST00000533064 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
TRIM3-212ENST00000533064 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
TRIM3-212ENST00000533064 MPLKIPQ8TAP9 179 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms