RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 SPANXA2-OT1Q8N9U9 137 aa13.84□□□□□ -0.19
SORL1-210ENST00000532451 MRPL34Q9BQ48 92 aaKnown RBP13.82□□□□□ -0.2
SORL1-210ENST00000532451 PKD1P98161 4303 aa13.82□□□□□ -0.2
SORL1-210ENST00000532451 HYDINQ4G0P3 5121 aa13.81□□□□□ -0.2
SORL1-210ENST00000532451 A0A087X002 238 aa13.81□□□□□ -0.2
SORL1-210ENST00000532451 SPINK6Q6UWN8 80 aa13.81□□□□□ -0.2
SORL1-210ENST00000532451 NOTCH2NLQ7Z3S9 236 aa13.81□□□□□ -0.2
SORL1-210ENST00000532451 MPLKIPQ8TAP9 179 aa13.81□□□□□ -0.2
SORL1-210ENST00000532451 FAT2Q9NYQ8 4349 aa13.8□□□□□ -0.2
SORL1-210ENST00000532451 NDUFS5O43920 106 aa13.79□□□□□ -0.2
SORL1-210ENST00000532451 KRTAP13-2Q52LG2 175 aa13.73□□□□□ -0.21
SORL1-210ENST00000532451 LRP1BQ9NZR2 4599 aa13.73□□□□□ -0.21
SORL1-210ENST00000532451 IGLV7-46A0A075B6I9 117 aa13.66□□□□□ -0.22
SORL1-210ENST00000532451 PCOTHQ58A44 107 aa13.66□□□□□ -0.22
SORL1-210ENST00000532451 LINC00336Q6ZUF6 198 aa13.66□□□□□ -0.22
SORL1-210ENST00000532451 Q1T7F1 81 aa13.65□□□□□ -0.22
SORL1-210ENST00000532451 C8orf87E5RJ46 101 aa13.65□□□□□ -0.22
SORL1-210ENST00000532451 KRTAP1-4P0C5Y4 121 aa13.63□□□□□ -0.23
SORL1-210ENST00000532451 C1orf195Q5TG92 126 aa13.58□□□□□ -0.24
SORL1-210ENST00000532451 VPS13BQ7Z7G8 4022 aa13.56□□□□□ -0.24
SORL1-210ENST00000532451 Q5W150 140 aa13.55□□□□□ -0.24
SORL1-210ENST00000532451 KRTAP13-3Q3SY46 172 aa13.55□□□□□ -0.24
SORL1-210ENST00000532451 LINC00313P59037 77 aa13.54□□□□□ -0.24
SORL1-210ENST00000532451 LOC101927531A0A1B0GV80 90 aa13.53□□□□□ -0.24
SORL1-210ENST00000532451 COA5Q86WW8 74 aa13.52□□□□□ -0.25
SORL1-210ENST00000532451 LIMD2Q9BT23 127 aa13.51□□□□□ -0.25
SORL1-210ENST00000532451 PRO0628Q9UI54 55 aa13.49□□□□□ -0.25
SORL1-210ENST00000532451 PLA2G1BP04054 148 aaKnown RBP13.49□□□□□ -0.25
SORL1-210ENST00000532451 V9GYY9 64 aa13.49□□□□□ -0.25
SORL1-210ENST00000532451 SACSQ9NZJ4 4579 aa13.48□□□□□ -0.25
SORL1-210ENST00000532451 Q8N9P0 234 aaPredicted RBP13.47□□□□□ -0.25
SORL1-210ENST00000532451 BRK1Q8WUW1 75 aa13.45□□□□□ -0.26
SORL1-210ENST00000532451 TYMSOSQ8TAI1 123 aa13.45□□□□□ -0.26
SORL1-210ENST00000532451 PSPHP1O15172 72 aa13.44□□□□□ -0.26
SORL1-210ENST00000532451 C4orf48Q5BLP8 95 aa13.43□□□□□ -0.26
SORL1-210ENST00000532451 FAM229AH3BQW9 127 aa13.39□□□□□ -0.27
SORL1-210ENST00000532451 KRTAP16-1A8MUX0 517 aa13.39□□□□□ -0.27
SORL1-210ENST00000532451 SPINK1P00995 79 aa13.38□□□□□ -0.27
SORL1-210ENST00000532451 PKHD1P08F94 4074 aa13.37□□□□□ -0.27
SORL1-210ENST00000532451 A8MUN3 132 aa13.37□□□□□ -0.27
SORL1-210ENST00000532451 HRES1P13985 223 aa13.34□□□□□ -0.27
SORL1-210ENST00000532451 RETNLBQ9BQ08 111 aa13.32□□□□□ -0.28
SORL1-210ENST00000532451 DYNC1H1Q14204 4646 aaKnown RBP13.31□□□□□ -0.28
SORL1-210ENST00000532451 PRR26Q8N8Z3 221 aa13.3□□□□□ -0.28
SORL1-210ENST00000532451 Q5VV11 94 aa13.3□□□□□ -0.28
SORL1-210ENST00000532451 A0A1B0GVY2 172 aa13.29□□□□□ -0.28
SORL1-210ENST00000532451 SMR3BP02814 79 aaPredicted RBP13.28□□□□□ -0.28
SORL1-210ENST00000532451 LINC00304Q8N9R0 145 aa13.27□□□□□ -0.29
SORL1-210ENST00000532451 IGKV2-30P06310 120 aa13.26□□□□□ -0.29
SORL1-210ENST00000532451 PRR15LQ9BU68 103 aa13.25□□□□□ -0.29
SORL1-210ENST00000532451 RPS29P62273 56 aaKnown RBP13.24□□□□□ -0.29
SORL1-210ENST00000532451 SPAG11AQ6PDA7 123 aa13.21□□□□□ -0.29
SORL1-210ENST00000532451 ACYP2P14621 99 aa13.18□□□□□ -0.3
SORL1-210ENST00000532451 LINC01558Q9Y6Z2 57 aa13.17□□□□□ -0.3
SORL1-210ENST00000532451 DMAC1Q96GE9 116 aa13.17□□□□□ -0.3
SORL1-210ENST00000532451 CHKB-CPT1BH3BT56 60 aa13.15□□□□□ -0.3
SORL1-210ENST00000532451 KRTAP10-4P60372 401 aaPredicted RBP13.15□□□□□ -0.3
SORL1-210ENST00000532451 APOBP04114 4563 aaKnown RBP13.15□□□□□ -0.3
SORL1-210ENST00000532451 Q75L30 129 aa13.14□□□□□ -0.31
SORL1-210ENST00000532451 IGKV2D-30A0A075B6S6 120 aa13.1□□□□□ -0.31
SORL1-210ENST00000532451 RYR2Q92736 4967 aa13.07□□□□□ -0.32
SORL1-210ENST00000532451 FAT1Q14517 4588 aa13.07□□□□□ -0.32
SORL1-210ENST00000532451 PKHD1L1Q86WI1 4243 aa13.04□□□□□ -0.32
SORL1-210ENST00000532451 A6NED7 52 aa12.98□□□□□ -0.33
SORL1-210ENST00000532451 A8MU10 97 aa12.98□□□□□ -0.33
SORL1-210ENST00000532451 C7orf65Q6ZTY9 151 aa12.93□□□□□ -0.34
SORL1-210ENST00000532451 C9orf92A6NGG3 77 aa12.9□□□□□ -0.34
SORL1-210ENST00000532451 LCA10Q71F78 164 aa12.9□□□□□ -0.34
SORL1-210ENST00000532451 KMT2CQ8NEZ4 4911 aaKnown RBP12.88□□□□□ -0.35
SORL1-210ENST00000532451 C20orf166-AS1Q96NR2 134 aa12.88□□□□□ -0.35
SORL1-210ENST00000532451 A8MUU9 505 aa12.87□□□□□ -0.35
SORL1-210ENST00000532451 CDC42SE1Q9NRR8 79 aa12.84□□□□□ -0.35
SORL1-210ENST00000532451 SPINK7P58062 85 aa12.84□□□□□ -0.35
SORL1-210ENST00000532451 Q8N1X5 172 aa12.76□□□□□ -0.37
SORL1-210ENST00000532451 ATP11AUNQ6ZP68 121 aa12.75□□□□□ -0.37
SORL1-210ENST00000532451 A0A1B0GU69 56 aa12.74□□□□□ -0.37
SORL1-210ENST00000532451 SPTSSBQ8NFR3 76 aa12.73□□□□□ -0.37
SORL1-210ENST00000532451 PMAIP1Q13794 54 aa12.71□□□□□ -0.37
SORL1-210ENST00000532451 Q5VSD8 79 aa12.66□□□□□ -0.38
SORL1-210ENST00000532451 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
SORL1-210ENST00000532451 KRTAP10-8P60410 259 aa12.64□□□□□ -0.39
SORL1-210ENST00000532451 TNXBP22105 4242 aa12.63□□□□□ -0.39
SORL1-210ENST00000532451 HSPG2P98160 4391 aa12.62□□□□□ -0.39
SORL1-210ENST00000532451 FAT3Q8TDW7 4589 aa12.6□□□□□ -0.39
SORL1-210ENST00000532451 LRP1Q07954 4544 aaKnown RBP12.57□□□□□ -0.4
SORL1-210ENST00000532451 RYR3Q15413 4870 aa12.56□□□□□ -0.4
SORL1-210ENST00000532451 A6NN06 94 aa12.53□□□□□ -0.4
SORL1-210ENST00000532451 KRTAP3-1Q9BYR8 98 aa12.53□□□□□ -0.4
SORL1-210ENST00000532451 RYR1P21817 5038 aa12.5□□□□□ -0.41
SORL1-210ENST00000532451 UQCR11O14957 56 aa12.47□□□□□ -0.41
SORL1-210ENST00000532451 SPATA8Q6RVD6 105 aa12.47□□□□□ -0.41
SORL1-210ENST00000532451 KRTAP17-1Q9BYP8 105 aa12.43□□□□□ -0.42
SORL1-210ENST00000532451 MIR22HGQ0VDD5 57 aa12.42□□□□□ -0.42
SORL1-210ENST00000532451 SEC61GP60059 68 aa12.42□□□□□ -0.42
SORL1-210ENST00000532451 KTN1-AS1Q86SY8 53 aa12.4□□□□□ -0.42
SORL1-210ENST00000532451 COX6B2Q6YFQ2 88 aa12.39□□□□□ -0.43
SORL1-210ENST00000532451 RPL37P61927 97 aaKnown RBP12.36□□□□□ -0.43
SORL1-210ENST00000532451 XP32Q5T750 250 aa12.32□□□□□ -0.44
SORL1-210ENST00000532451 MT1HL1P0DM35 61 aa12.29□□□□□ -0.44
SORL1-210ENST00000532451 DMBT1Q9UGM3 2413 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms