RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 A0A1B0GW54 56 aa11.9□□□□□ -0.5
CAPN1-222ENST00000532285 J3KT08 172 aa11.9□□□□□ -0.5
CAPN1-222ENST00000532285 A0A1B0GVX0 72 aa11.89□□□□□ -0.51
CAPN1-222ENST00000532285 C9orf118A6NHY6 69 aa11.89□□□□□ -0.51
CAPN1-222ENST00000532285 C8orf87E5RJ46 101 aa11.88□□□□□ -0.51
CAPN1-222ENST00000532285 C14orf132Q9NPU4 83 aa11.86□□□□□ -0.51
CAPN1-222ENST00000532285 TAX1BP3O14907 124 aa11.85□□□□□ -0.51
CAPN1-222ENST00000532285 M0R2T5 61 aa11.83□□□□□ -0.52
CAPN1-222ENST00000532285 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
CAPN1-222ENST00000532285 FLGP20930 4061 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-222ENST00000532285 NDUFB1O75438 58 aa11.8□□□□□ -0.52
CAPN1-222ENST00000532285 H3BT86 120 aa11.79□□□□□ -0.52
CAPN1-222ENST00000532285 LCE2DQ5TA82 110 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-222ENST00000532285 KRTAP10-6P60371 365 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-222ENST00000532285 LORP23490 312 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-222ENST00000532285 A8MWP4 228 aa11.74□□□□□ -0.53
CAPN1-222ENST00000532285 NREPQ16612 68 aa11.72□□□□□ -0.53
CAPN1-222ENST00000532285 MTURNQ8N3F0 131 aa11.72□□□□□ -0.53
CAPN1-222ENST00000532285 IGKV3D-7A0A0C4DH55 119 aa11.68□□□□□ -0.54
CAPN1-222ENST00000532285 C8orf17Q9NRJ1 99 aa11.68□□□□□ -0.54
CAPN1-222ENST00000532285 Q8N9P0 234 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-222ENST00000532285 SPCS1Q9Y6A9 102 aa11.66□□□□□ -0.54
CAPN1-222ENST00000532285 ZCCHC13Q8WW36 166 aaKnown RBP11.65□□□□□ -0.54
CAPN1-222ENST00000532285 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
CAPN1-222ENST00000532285 PRR15Q8IV56 129 aa11.63□□□□□ -0.55
CAPN1-222ENST00000532285 HRES1P13985 223 aa11.61□□□□□ -0.55
CAPN1-222ENST00000532285 RBM12B-AS1Q9P1G2 102 aa11.61□□□□□ -0.55
CAPN1-222ENST00000532285 KRTAP9-6A0A140TA67 174 aa11.59□□□□□ -0.55
CAPN1-222ENST00000532285 FAM236DA0A1B0GTK5 79 aa11.59□□□□□ -0.55
CAPN1-222ENST00000532285 FAM236CP0DP71 79 aa11.59□□□□□ -0.55
CAPN1-222ENST00000532285 Q6ZVQ6 151 aa11.59□□□□□ -0.55
CAPN1-222ENST00000532285 MPLKIPQ8TAP9 179 aa11.59□□□□□ -0.55
CAPN1-222ENST00000532285 SMCPP49901 116 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-222ENST00000532285 MMP24-AS1A0A0U1RRL7 71 aa11.52□□□□□ -0.57
CAPN1-222ENST00000532285 SPINK7P58062 85 aa11.52□□□□□ -0.57
CAPN1-222ENST00000532285 K7EQZ3 153 aa11.51□□□□□ -0.57
CAPN1-222ENST00000532285 BPY2O14599 106 aa11.51□□□□□ -0.57
CAPN1-222ENST00000532285 TMEM254Q8TBM7 123 aa11.51□□□□□ -0.57
CAPN1-222ENST00000532285 MRPL34Q9BQ48 92 aaKnown RBP11.49□□□□□ -0.57
CAPN1-222ENST00000532285 K7EP34 96 aa11.48□□□□□ -0.57
CAPN1-222ENST00000532285 hDV103S1A0JD37 113 aa11.47□□□□□ -0.57
CAPN1-222ENST00000532285 PRO0461Q9UI25 63 aa11.47□□□□□ -0.57
CAPN1-222ENST00000532285 CRCT1Q9UGL9 99 aa11.41□□□□□ -0.58
CAPN1-222ENST00000532285 NDUFS5O43920 106 aa11.4□□□□□ -0.58
CAPN1-222ENST00000532285 KRTAP9-8Q9BYQ0 159 aa11.39□□□□□ -0.59
CAPN1-222ENST00000532285 GTF2H5Q6ZYL4 71 aa11.38□□□□□ -0.59
CAPN1-222ENST00000532285 PCP4L1A6NKN8 68 aa11.37□□□□□ -0.59
CAPN1-222ENST00000532285 UBL5Q9BZL1 73 aa11.36□□□□□ -0.59
CAPN1-222ENST00000532285 Q8N9L7 120 aa11.35□□□□□ -0.59
CAPN1-222ENST00000532285 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
CAPN1-222ENST00000532285 WFDC13Q8IUB5 93 aa11.34□□□□□ -0.59
CAPN1-222ENST00000532285 FSIP2Q5CZC0 6907 aa11.33□□□□□ -0.6
CAPN1-222ENST00000532285 CASC2Q6XLA1 102 aa11.32□□□□□ -0.6
CAPN1-222ENST00000532285 F8W1H4 67 aa11.3□□□□□ -0.6
CAPN1-222ENST00000532285 HCG22E2RYF7 251 aa11.24□□□□□ -0.61
CAPN1-222ENST00000532285 Q5W150 140 aa11.24□□□□□ -0.61
CAPN1-222ENST00000532285 MT2AP02795 61 aa11.23□□□□□ -0.61
CAPN1-222ENST00000532285 ETDBQ3ZM63 59 aa11.22□□□□□ -0.61
CAPN1-222ENST00000532285 IGKV2D-30A0A075B6S6 120 aa11.2□□□□□ -0.62
CAPN1-222ENST00000532285 IGKV2-30P06310 120 aa11.2□□□□□ -0.62
CAPN1-222ENST00000532285 CXCL6P80162 114 aa11.18□□□□□ -0.62
CAPN1-222ENST00000532285 C7orf65Q6ZTY9 151 aa11.18□□□□□ -0.62
CAPN1-222ENST00000532285 MT1FP04733 61 aa11.14□□□□□ -0.63
CAPN1-222ENST00000532285 KRTAP10-10P60014 251 aa11.13□□□□□ -0.63
CAPN1-222ENST00000532285 H1FX-AS1Q4G0G2 97 aa11.12□□□□□ -0.63
CAPN1-222ENST00000532285 KRTAP9-3Q9BYQ3 159 aa11.03□□□□□ -0.64
CAPN1-222ENST00000532285 TP53AIP1Q9HCN2 124 aa11.01□□□□□ -0.65
CAPN1-222ENST00000532285 ACYP1P07311 99 aa11□□□□□ -0.65
CAPN1-222ENST00000532285 C4orf26Q17RF5 130 aa10.99□□□□□ -0.65
CAPN1-222ENST00000532285 USH2AO75445 5202 aa10.96□□□□□ -0.65
CAPN1-222ENST00000532285 LCE2BO14633 110 aa10.94□□□□□ -0.66
CAPN1-222ENST00000532285 FAM240AA0A1B0GVK7 77 aa10.93□□□□□ -0.66
CAPN1-222ENST00000532285 ATP5EP2Q5VTU8 51 aa10.88□□□□□ -0.67
CAPN1-222ENST00000532285 SSPOA2VEC9 5147 aa10.83□□□□□ -0.68
CAPN1-222ENST00000532285 KRTAP3-1Q9BYR8 98 aa10.82□□□□□ -0.68
CAPN1-222ENST00000532285 C1orf64Q8NEQ6 169 aa10.81□□□□□ -0.68
CAPN1-222ENST00000532285 HIST1H4AP62805 103 aaKnown RBP10.79□□□□□ -0.68
CAPN1-222ENST00000532285 TRAV22A0A0B4J277 110 aa10.77□□□□□ -0.69
CAPN1-222ENST00000532285 CYP4F30PQ9H0H9 118 aa10.76□□□□□ -0.69
CAPN1-222ENST00000532285 A0A1B0GV90 55 aa10.75□□□□□ -0.69
CAPN1-222ENST00000532285 S4R3F8 94 aa10.75□□□□□ -0.69
CAPN1-222ENST00000532285 C5orf47Q569G3 176 aa10.73□□□□□ -0.69
CAPN1-222ENST00000532285 LINC00643Q86TS7 51 aa10.72□□□□□ -0.69
CAPN1-222ENST00000532285 KRTAP19-1Q8IUB9 90 aa10.71□□□□□ -0.69
CAPN1-222ENST00000532285 LOC101927531A0A1B0GV80 90 aa10.7□□□□□ -0.7
CAPN1-222ENST00000532285 UQCRQO14949 82 aa10.69□□□□□ -0.7
CAPN1-222ENST00000532285 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
CAPN1-222ENST00000532285 LCA10Q71F78 164 aa10.66□□□□□ -0.7
CAPN1-222ENST00000532285 A0A087WVE0 104 aa10.63□□□□□ -0.71
CAPN1-222ENST00000532285 ATOX1O00244 68 aa10.63□□□□□ -0.71
CAPN1-222ENST00000532285 H0Y9P7 68 aa10.61□□□□□ -0.71
CAPN1-222ENST00000532285 FCGBPQ9Y6R7 5405 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-222ENST00000532285 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-222ENST00000532285 FAM236AA0A1B0GUQ0 79 aa10.58□□□□□ -0.72
CAPN1-222ENST00000532285 FAM236BA0A1B0GV22 79 aa10.58□□□□□ -0.72
CAPN1-222ENST00000532285 KRTAP19-6Q3LI70 58 aa10.56□□□□□ -0.72
CAPN1-222ENST00000532285 J3QR89 54 aa10.53□□□□□ -0.72
CAPN1-222ENST00000532285 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
CAPN1-222ENST00000532285 LINC00208Q96KT6 92 aa10.46□□□□□ -0.73
CAPN1-222ENST00000532285 OCR1Q9BZK8 76 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms