RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 A0A1W2PNM2 257 aa7.15□□□□□ -1.26
COPB1-208ENST00000532088 A0A1B0GV72 72 aa7.14□□□□□ -1.27
COPB1-208ENST00000532088 CCKP06307 115 aa7.14□□□□□ -1.27
COPB1-208ENST00000532088 ASB16-AS1Q495Z4 193 aa7.14□□□□□ -1.27
COPB1-208ENST00000532088 HRCT1Q6UXD1 115 aa7.14□□□□□ -1.27
COPB1-208ENST00000532088 Q6ZQT0 140 aa7.14□□□□□ -1.27
COPB1-208ENST00000532088 C14orf132Q9NPU4 83 aa7.13□□□□□ -1.27
COPB1-208ENST00000532088 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
COPB1-208ENST00000532088 FP248Q71RG6 208 aaPredicted RBP7.1□□□□□ -1.27
COPB1-208ENST00000532088 A0A087WSZ3 146 aa7.09□□□□□ -1.27
COPB1-208ENST00000532088 ETDBQ3ZM63 59 aa7.08□□□□□ -1.28
COPB1-208ENST00000532088 HERC1Q15751 4861 aa7.07□□□□□ -1.28
COPB1-208ENST00000532088 VPS25Q9BRG1 176 aa7.07□□□□□ -1.28
COPB1-208ENST00000532088 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
COPB1-208ENST00000532088 RETNLBQ9BQ08 111 aa7.02□□□□□ -1.29
COPB1-208ENST00000532088 PRR4Q16378 134 aa7.01□□□□□ -1.29
COPB1-208ENST00000532088 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
COPB1-208ENST00000532088 Q96NJ1 140 aa7□□□□□ -1.29
COPB1-208ENST00000532088 LINC00472Q9H8W2 130 aa7□□□□□ -1.29
COPB1-208ENST00000532088 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
COPB1-208ENST00000532088 J3KT08 172 aa6.98□□□□□ -1.29
COPB1-208ENST00000532088 ACYP1P07311 99 aa6.97□□□□□ -1.29
COPB1-208ENST00000532088 NREPQ16612 68 aa6.97□□□□□ -1.29
COPB1-208ENST00000532088 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
COPB1-208ENST00000532088 FAM240AA0A1B0GVK7 77 aa6.96□□□□□ -1.3
COPB1-208ENST00000532088 MPLKIPQ8TAP9 179 aa6.96□□□□□ -1.3
COPB1-208ENST00000532088 K7ERU9 68 aa6.95□□□□□ -1.3
COPB1-208ENST00000532088 UBL5Q9BZL1 73 aa6.94□□□□□ -1.3
COPB1-208ENST00000532088 IGKV4-1P06312 121 aa6.93□□□□□ -1.3
COPB1-208ENST00000532088 SCGB1A1P11684 91 aa6.93□□□□□ -1.3
COPB1-208ENST00000532088 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
COPB1-208ENST00000532088 LINC00846Q9NV44 126 aa6.93□□□□□ -1.3
COPB1-208ENST00000532088 J3QR89 54 aa6.92□□□□□ -1.3
COPB1-208ENST00000532088 Q6ZVQ6 151 aa6.92□□□□□ -1.3
COPB1-208ENST00000532088 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
COPB1-208ENST00000532088 A8MWP4 228 aa6.88□□□□□ -1.31
COPB1-208ENST00000532088 BPY2O14599 106 aa6.88□□□□□ -1.31
COPB1-208ENST00000532088 NDUFB1O75438 58 aa6.88□□□□□ -1.31
COPB1-208ENST00000532088 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
COPB1-208ENST00000532088 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
COPB1-208ENST00000532088 LPAP08519 4548 aa6.86□□□□□ -1.31
COPB1-208ENST00000532088 C8orf87E5RJ46 101 aa6.86□□□□□ -1.31
COPB1-208ENST00000532088 DSCR10P59022 87 aa6.85□□□□□ -1.31
COPB1-208ENST00000532088 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
COPB1-208ENST00000532088 CXCL6P80162 114 aa6.84□□□□□ -1.31
COPB1-208ENST00000532088 PRR15Q8IV56 129 aa6.84□□□□□ -1.31
COPB1-208ENST00000532088 IGKV3D-7A0A0C4DH55 119 aa6.83□□□□□ -1.32
COPB1-208ENST00000532088 LINC00313P59037 77 aa6.83□□□□□ -1.32
COPB1-208ENST00000532088 LRP2P98164 4655 aa6.82□□□□□ -1.32
COPB1-208ENST00000532088 IGHV6-1A0A0B4J1U7 121 aa6.82□□□□□ -1.32
COPB1-208ENST00000532088 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
COPB1-208ENST00000532088 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
COPB1-208ENST00000532088 A0A0A0MQY5 61 aa6.81□□□□□ -1.32
COPB1-208ENST00000532088 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
COPB1-208ENST00000532088 LINC00643Q86TS7 51 aa6.8□□□□□ -1.32
COPB1-208ENST00000532088 MUC17Q685J3 4493 aa6.79□□□□□ -1.32
COPB1-208ENST00000532088 K7EQZ3 153 aa6.79□□□□□ -1.32
COPB1-208ENST00000532088 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
COPB1-208ENST00000532088 C8orf17Q9NRJ1 99 aa6.79□□□□□ -1.32
COPB1-208ENST00000532088 KRTAP16-1A8MUX0 517 aa6.77□□□□□ -1.33
COPB1-208ENST00000532088 Q75L30 129 aa6.77□□□□□ -1.33
COPB1-208ENST00000532088 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
COPB1-208ENST00000532088 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
COPB1-208ENST00000532088 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
COPB1-208ENST00000532088 MMP24-AS1A0A0U1RRL7 71 aa6.75□□□□□ -1.33
COPB1-208ENST00000532088 A8MUU9 505 aa6.75□□□□□ -1.33
COPB1-208ENST00000532088 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
COPB1-208ENST00000532088 Q8N9L7 120 aa6.73□□□□□ -1.33
COPB1-208ENST00000532088 TMEM254Q8TBM7 123 aa6.73□□□□□ -1.33
COPB1-208ENST00000532088 hDV103S1A0JD37 113 aa6.72□□□□□ -1.33
COPB1-208ENST00000532088 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
COPB1-208ENST00000532088 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
COPB1-208ENST00000532088 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
COPB1-208ENST00000532088 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
COPB1-208ENST00000532088 HIST1H4AP62805 103 aaKnown RBP6.65□□□□□ -1.34
COPB1-208ENST00000532088 WFDC13Q8IUB5 93 aa6.65□□□□□ -1.34
COPB1-208ENST00000532088 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
COPB1-208ENST00000532088 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
COPB1-208ENST00000532088 PCOTHQ58A44 107 aa6.64□□□□□ -1.35
COPB1-208ENST00000532088 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
COPB1-208ENST00000532088 NDUFS5O43920 106 aa6.59□□□□□ -1.35
COPB1-208ENST00000532088 TP53AIP1Q9HCN2 124 aa6.59□□□□□ -1.35
COPB1-208ENST00000532088 A0A087WVE0 104 aa6.58□□□□□ -1.36
COPB1-208ENST00000532088 MT-ATP8P03928 68 aa6.57□□□□□ -1.36
COPB1-208ENST00000532088 LCE1AQ5T7P2 110 aa6.55□□□□□ -1.36
COPB1-208ENST00000532088 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
COPB1-208ENST00000532088 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
COPB1-208ENST00000532088 UQCRQO14949 82 aa6.5□□□□□ -1.37
COPB1-208ENST00000532088 Q5W150 140 aa6.5□□□□□ -1.37
COPB1-208ENST00000532088 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
COPB1-208ENST00000532088 MUC2Q02817 5179 aa6.47□□□□□ -1.37
COPB1-208ENST00000532088 TRAV22A0A0B4J277 110 aa6.46□□□□□ -1.38
COPB1-208ENST00000532088 SPINK7P58062 85 aa6.46□□□□□ -1.38
COPB1-208ENST00000532088 ANAPC13Q9BS18 74 aa6.46□□□□□ -1.38
COPB1-208ENST00000532088 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
COPB1-208ENST00000532088 A0A0U1RQV1 116 aa6.45□□□□□ -1.38
COPB1-208ENST00000532088 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
COPB1-208ENST00000532088 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
COPB1-208ENST00000532088 ATOX1O00244 68 aa6.44□□□□□ -1.38
COPB1-208ENST00000532088 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms