RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 LINC00313P59037 77 aa12.04□□□□□ -0.48
LRRK1-208ENST00000532029 A0A1B0GVX0 72 aa12.03□□□□□ -0.48
LRRK1-208ENST00000532029 RPL37P61927 97 aaKnown RBP12.03□□□□□ -0.48
LRRK1-208ENST00000532029 C8orf87E5RJ46 101 aa12□□□□□ -0.49
LRRK1-208ENST00000532029 A8MWP4 228 aa11.99□□□□□ -0.49
LRRK1-208ENST00000532029 PCOTHQ58A44 107 aa11.98□□□□□ -0.49
LRRK1-208ENST00000532029 Q6ZVQ6 151 aa11.98□□□□□ -0.49
LRRK1-208ENST00000532029 Q75L30 129 aa11.96□□□□□ -0.49
LRRK1-208ENST00000532029 NOTCH2NLQ7Z3S9 236 aa11.96□□□□□ -0.49
LRRK1-208ENST00000532029 UBL5Q9BZL1 73 aa11.96□□□□□ -0.49
LRRK1-208ENST00000532029 BPY2O14599 106 aa11.95□□□□□ -0.5
LRRK1-208ENST00000532029 LINC00846Q9NV44 126 aa11.95□□□□□ -0.5
LRRK1-208ENST00000532029 MUC2Q02817 5179 aa11.94□□□□□ -0.5
LRRK1-208ENST00000532029 IGKV3D-7A0A0C4DH55 119 aa11.93□□□□□ -0.5
LRRK1-208ENST00000532029 C20orf166-AS1Q96NR2 134 aa11.93□□□□□ -0.5
LRRK1-208ENST00000532029 A8MUU9 505 aa11.91□□□□□ -0.5
LRRK1-208ENST00000532029 KRTAP16-1A8MUX0 517 aa11.91□□□□□ -0.5
LRRK1-208ENST00000532029 ATP11AUNQ6ZP68 121 aa11.9□□□□□ -0.5
LRRK1-208ENST00000532029 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
LRRK1-208ENST00000532029 C8orf17Q9NRJ1 99 aa11.88□□□□□ -0.51
LRRK1-208ENST00000532029 K7EQZ3 153 aa11.85□□□□□ -0.51
LRRK1-208ENST00000532029 ACYP1P07311 99 aa11.83□□□□□ -0.52
LRRK1-208ENST00000532029 KRTAP4-1Q9BYQ7 146 aa11.83□□□□□ -0.52
LRRK1-208ENST00000532029 A0A0U1RQV1 116 aa11.79□□□□□ -0.52
LRRK1-208ENST00000532029 FAM240AA0A1B0GVK7 77 aa11.78□□□□□ -0.52
LRRK1-208ENST00000532029 MMP24-AS1A0A0U1RRL7 71 aa11.77□□□□□ -0.53
LRRK1-208ENST00000532029 Q8N9L7 120 aa11.77□□□□□ -0.53
LRRK1-208ENST00000532029 hDV103S1A0JD37 113 aa11.73□□□□□ -0.53
LRRK1-208ENST00000532029 TMEM254Q8TBM7 123 aa11.73□□□□□ -0.53
LRRK1-208ENST00000532029 CXCL6P80162 114 aa11.72□□□□□ -0.53
LRRK1-208ENST00000532029 Q8N9P0 234 aaPredicted RBP11.72□□□□□ -0.53
LRRK1-208ENST00000532029 MRPL34Q9BQ48 92 aaKnown RBP11.72□□□□□ -0.53
LRRK1-208ENST00000532029 WFDC13Q8IUB5 93 aa11.67□□□□□ -0.54
LRRK1-208ENST00000532029 J3QR89 54 aa11.66□□□□□ -0.54
LRRK1-208ENST00000532029 CASC2Q6XLA1 102 aa11.66□□□□□ -0.54
LRRK1-208ENST00000532029 FAT4Q6V0I7 4981 aa11.66□□□□□ -0.54
LRRK1-208ENST00000532029 ZCCHC13Q8WW36 166 aaKnown RBP11.65□□□□□ -0.54
LRRK1-208ENST00000532029 NDUFS5O43920 106 aa11.63□□□□□ -0.55
LRRK1-208ENST00000532029 HCG22E2RYF7 251 aa11.62□□□□□ -0.55
LRRK1-208ENST00000532029 ATP5EP2Q5VTU8 51 aa11.61□□□□□ -0.55
LRRK1-208ENST00000532029 LINC00643Q86TS7 51 aa11.56□□□□□ -0.56
LRRK1-208ENST00000532029 LCE2AQ5TA79 106 aaPredicted RBP11.52□□□□□ -0.57
LRRK1-208ENST00000532029 HIST1H4AP62805 103 aaKnown RBP11.49□□□□□ -0.57
LRRK1-208ENST00000532029 COX6B2Q6YFQ2 88 aa11.47□□□□□ -0.57
LRRK1-208ENST00000532029 KRTAP19-2Q3LHN2 52 aa11.45□□□□□ -0.58
LRRK1-208ENST00000532029 SPINK7P58062 85 aa11.44□□□□□ -0.58
LRRK1-208ENST00000532029 K7ERU9 68 aa11.43□□□□□ -0.58
LRRK1-208ENST00000532029 LCE2CQ5TA81 110 aa11.41□□□□□ -0.58
LRRK1-208ENST00000532029 Q5W150 140 aa11.4□□□□□ -0.58
LRRK1-208ENST00000532029 HRES1P13985 223 aa11.38□□□□□ -0.59
LRRK1-208ENST00000532029 TP53AIP1Q9HCN2 124 aa11.38□□□□□ -0.59
LRRK1-208ENST00000532029 RBM12B-AS1Q9P1G2 102 aa11.36□□□□□ -0.59
LRRK1-208ENST00000532029 A0A087WVE0 104 aa11.35□□□□□ -0.59
LRRK1-208ENST00000532029 IGKV2D-30A0A075B6S6 120 aa11.32□□□□□ -0.6
LRRK1-208ENST00000532029 FAM236DA0A1B0GTK5 79 aa11.32□□□□□ -0.6
LRRK1-208ENST00000532029 IGKV2-30P06310 120 aa11.32□□□□□ -0.6
LRRK1-208ENST00000532029 FAM236CP0DP71 79 aa11.32□□□□□ -0.6
LRRK1-208ENST00000532029 C7orf65Q6ZTY9 151 aa11.3□□□□□ -0.6
LRRK1-208ENST00000532029 MPLKIPQ8TAP9 179 aa11.3□□□□□ -0.6
LRRK1-208ENST00000532029 MT1HP80294 61 aa11.27□□□□□ -0.61
LRRK1-208ENST00000532029 UQCRQO14949 82 aa11.19□□□□□ -0.62
LRRK1-208ENST00000532029 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
LRRK1-208ENST00000532029 M0R2T5 61 aa11.18□□□□□ -0.62
LRRK1-208ENST00000532029 KRTAP9-2Q9BYQ4 174 aa11.18□□□□□ -0.62
LRRK1-208ENST00000532029 IMUPQ9GZP8 106 aa11.17□□□□□ -0.62
LRRK1-208ENST00000532029 MT-ATP8P03928 68 aa11.16□□□□□ -0.62
LRRK1-208ENST00000532029 SCGB1A1P11684 91 aa11.1□□□□□ -0.63
LRRK1-208ENST00000532029 H0Y9P7 68 aa11.09□□□□□ -0.63
LRRK1-208ENST00000532029 LOC101927531A0A1B0GV80 90 aa11.08□□□□□ -0.64
LRRK1-208ENST00000532029 ATOX1O00244 68 aa11.08□□□□□ -0.64
LRRK1-208ENST00000532029 FLGP20930 4061 aaPredicted RBP11.07□□□□□ -0.64
LRRK1-208ENST00000532029 OCR1Q9BZK8 76 aa11.07□□□□□ -0.64
LRRK1-208ENST00000532029 C4orf26Q17RF5 130 aa11.05□□□□□ -0.64
LRRK1-208ENST00000532029 CYP4F30PQ9H0H9 118 aa11.04□□□□□ -0.64
LRRK1-208ENST00000532029 MP68P56378 58 aa11□□□□□ -0.65
LRRK1-208ENST00000532029 H1FX-AS1Q4G0G2 97 aa10.99□□□□□ -0.65
LRRK1-208ENST00000532029 KRTAP10-6P60371 365 aaPredicted RBP10.98□□□□□ -0.65
LRRK1-208ENST00000532029 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
LRRK1-208ENST00000532029 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
LRRK1-208ENST00000532029 C5orf47Q569G3 176 aa10.97□□□□□ -0.65
LRRK1-208ENST00000532029 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
LRRK1-208ENST00000532029 LINC00208Q96KT6 92 aa10.96□□□□□ -0.65
LRRK1-208ENST00000532029 KRTAP9-6A0A140TA67 174 aa10.94□□□□□ -0.66
LRRK1-208ENST00000532029 LORP23490 312 aaPredicted RBP10.93□□□□□ -0.66
LRRK1-208ENST00000532029 SMIM20Q8N5G0 67 aa10.91□□□□□ -0.66
LRRK1-208ENST00000532029 H3BPC8 53 aa10.89□□□□□ -0.67
LRRK1-208ENST00000532029 LCE2DQ5TA82 110 aaPredicted RBP10.86□□□□□ -0.67
LRRK1-208ENST00000532029 KRTAP3-1Q9BYR8 98 aa10.85□□□□□ -0.67
LRRK1-208ENST00000532029 TRAV7A0A075B6U4 112 aa10.84□□□□□ -0.67
LRRK1-208ENST00000532029 KLKP1Q107X0 134 aa10.79□□□□□ -0.68
LRRK1-208ENST00000532029 S4R3F8 94 aa10.74□□□□□ -0.69
LRRK1-208ENST00000532029 KRTAP9-8Q9BYQ0 159 aa10.72□□□□□ -0.69
LRRK1-208ENST00000532029 A8MUN3 132 aa10.67□□□□□ -0.7
LRRK1-208ENST00000532029 SERP2Q8N6R1 65 aa10.66□□□□□ -0.7
LRRK1-208ENST00000532029 MT2AP02795 61 aa10.65□□□□□ -0.7
LRRK1-208ENST00000532029 LCA10Q71F78 164 aa10.65□□□□□ -0.7
LRRK1-208ENST00000532029 FSIP2Q5CZC0 6907 aa10.6□□□□□ -0.71
LRRK1-208ENST00000532029 CSAG1Q6PB30 78 aa10.6□□□□□ -0.71
LRRK1-208ENST00000532029 KRTAP10-10P60014 251 aa10.57□□□□□ -0.72
LRRK1-208ENST00000532029 SNURFQ9Y675 71 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms