RNA–Protein interactions for RNA: ENST00000531988.1

AP000641.1-201, humanhuman

BASIC

Gene AP000641.1, Length 1,639 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000641.1-201ENST00000531988 PRRC2CQ9Y520 2896 aaKnown RBP3.09□□□□□ -1.92
AP000641.1-201ENST00000531988 NBPF19A0A087WUL8 3843 aa3.09□□□□□ -1.92
AP000641.1-201ENST00000531988 CELSR1Q9NYQ6 3014 aa3.09□□□□□ -1.92
AP000641.1-201ENST00000531988 COL12A1Q99715 3063 aa3.08□□□□□ -1.92
AP000641.1-201ENST00000531988 Q5VSD8 79 aa3.08□□□□□ -1.92
AP000641.1-201ENST00000531988 DNAH12Q6ZR08 3092 aa3.08□□□□□ -1.92
AP000641.1-201ENST00000531988 AKAP9Q99996 3911 aa3.08□□□□□ -1.92
AP000641.1-201ENST00000531988 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
AP000641.1-201ENST00000531988 DEFB124Q8NES8 71 aa3.06□□□□□ -1.92
AP000641.1-201ENST00000531988 EP300Q09472 2414 aaPredicted RBP3.06□□□□□ -1.92
AP000641.1-201ENST00000531988 MUC6Q6W4X9 2439 aa3.06□□□□□ -1.92
AP000641.1-201ENST00000531988 CCDC168Q8NDH2 2452 aa3.04□□□□□ -1.92
AP000641.1-201ENST00000531988 SPG11Q96JI7 2443 aa3.04□□□□□ -1.92
AP000641.1-201ENST00000531988 ZFHX4Q86UP3 3567 aa3.04□□□□□ -1.92
AP000641.1-201ENST00000531988 CELSR3Q9NYQ7 3312 aa3.04□□□□□ -1.92
AP000641.1-201ENST00000531988 VPS13DQ5THJ4 4388 aa3.03□□□□□ -1.92
AP000641.1-201ENST00000531988 NCOR2Q9Y618 2525 aa3.03□□□□□ -1.92
AP000641.1-201ENST00000531988 M0QZ58 72 aa3.03□□□□□ -1.92
AP000641.1-201ENST00000531988 SPART-AS1P0CW21 52 aa3.03□□□□□ -1.92
AP000641.1-201ENST00000531988 ABCA2Q9BZC7 2435 aa3.03□□□□□ -1.92
AP000641.1-201ENST00000531988 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
AP000641.1-201ENST00000531988 COL6A5A8TX70 2615 aa3.02□□□□□ -1.93
AP000641.1-201ENST00000531988 LAMA1P25391 3075 aa3.01□□□□□ -1.93
AP000641.1-201ENST00000531988 NF1P21359 2839 aa3□□□□□ -1.93
AP000641.1-201ENST00000531988 DNAH14Q0VDD8 3507 aa3□□□□□ -1.93
AP000641.1-201ENST00000531988 BRCA2P51587 3418 aa3□□□□□ -1.93
AP000641.1-201ENST00000531988 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
AP000641.1-201ENST00000531988 CREBBPQ92793 2442 aa2.98□□□□□ -1.93
AP000641.1-201ENST00000531988 RELNP78509 3460 aa2.98□□□□□ -1.93
AP000641.1-201ENST00000531988 F8P00451 2351 aa2.98□□□□□ -1.93
AP000641.1-201ENST00000531988 MEGF8Q7Z7M0 2845 aa2.97□□□□□ -1.93
AP000641.1-201ENST00000531988 LAMA5O15230 3695 aa2.97□□□□□ -1.93
AP000641.1-201ENST00000531988 ATMQ13315 3056 aa2.97□□□□□ -1.93
AP000641.1-201ENST00000531988 RIF1Q5UIP0 2472 aaKnown RBP2.96□□□□□ -1.94
AP000641.1-201ENST00000531988 SPENQ96T58 3664 aaKnown RBP2.96□□□□□ -1.94
AP000641.1-201ENST00000531988 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
AP000641.1-201ENST00000531988 ANKHD1Q8IWZ3 2542 aaKnown RBP2.95□□□□□ -1.94
AP000641.1-201ENST00000531988 HTN3P15516 51 aa2.95□□□□□ -1.94
AP000641.1-201ENST00000531988 CEP290O15078 2479 aa2.94□□□□□ -1.94
AP000641.1-201ENST00000531988 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
AP000641.1-201ENST00000531988 TACC2O95359 2948 aa2.94□□□□□ -1.94
AP000641.1-201ENST00000531988 DMXL2Q8TDJ6 3036 aa2.94□□□□□ -1.94
AP000641.1-201ENST00000531988 FREM2Q5SZK8 3169 aa2.94□□□□□ -1.94
AP000641.1-201ENST00000531988 CSMD1Q96PZ7 3565 aa2.94□□□□□ -1.94
AP000641.1-201ENST00000531988 LOC400499M0QZD8 3231 aa2.93□□□□□ -1.94
AP000641.1-201ENST00000531988 NAV2Q8IVL1 2488 aa2.93□□□□□ -1.94
AP000641.1-201ENST00000531988 WDFY3Q8IZQ1 3526 aa2.93□□□□□ -1.94
AP000641.1-201ENST00000531988 NBASA2RRP1 2371 aa2.92□□□□□ -1.94
AP000641.1-201ENST00000531988 HIVEP3Q5T1R4 2406 aa2.92□□□□□ -1.94
AP000641.1-201ENST00000531988 DNAH11Q96DT5 4516 aa2.91□□□□□ -1.94
AP000641.1-201ENST00000531988 LAMA3Q16787 3333 aa2.9□□□□□ -1.94
AP000641.1-201ENST00000531988 DMBT1Q9UGM3 2413 aaPredicted RBP2.9□□□□□ -1.95
AP000641.1-201ENST00000531988 APCP25054 2843 aa2.89□□□□□ -1.95
AP000641.1-201ENST00000531988 CHD8Q9HCK8 2581 aa2.89□□□□□ -1.95
AP000641.1-201ENST00000531988 TTC28Q96AY4 2481 aa2.89□□□□□ -1.95
AP000641.1-201ENST00000531988 DEFB4AO15263 64 aa2.87□□□□□ -1.95
AP000641.1-201ENST00000531988 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
AP000641.1-201ENST00000531988 SONP18583 2426 aaKnown RBP2.86□□□□□ -1.95
AP000641.1-201ENST00000531988 DCHS2Q6V1P9 2916 aa2.86□□□□□ -1.95
AP000641.1-201ENST00000531988 SETD2Q9BYW2 2564 aaPredicted RBP2.86□□□□□ -1.95
AP000641.1-201ENST00000531988 ABCA12Q86UK0 2595 aa2.86□□□□□ -1.95
AP000641.1-201ENST00000531988 DEFB135Q30KP9 77 aa2.85□□□□□ -1.95
AP000641.1-201ENST00000531988 TEX15Q9BXT5 2789 aa2.85□□□□□ -1.95
AP000641.1-201ENST00000531988 PTPN13Q12923 2485 aa2.84□□□□□ -1.96
AP000641.1-201ENST00000531988 FRAS1Q86XX4 4008 aa2.83□□□□□ -1.96
AP000641.1-201ENST00000531988 EYSQ5T1H1 3165 aa2.83□□□□□ -1.96
AP000641.1-201ENST00000531988 ASPMQ8IZT6 3477 aa2.83□□□□□ -1.96
AP000641.1-201ENST00000531988 SMG1Q96Q15 3661 aaKnown RBP2.83□□□□□ -1.96
AP000641.1-201ENST00000531988 VCANP13611 3396 aa2.82□□□□□ -1.96
AP000641.1-201ENST00000531988 CDH23Q9H251 3354 aa2.82□□□□□ -1.96
AP000641.1-201ENST00000531988 MYCBP2O75592 4640 aa2.82□□□□□ -1.96
AP000641.1-201ENST00000531988 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
AP000641.1-201ENST00000531988 SETXQ7Z333 2677 aaKnown RBP2.8□□□□□ -1.96
AP000641.1-201ENST00000531988 NIPBLQ6KC79 2804 aaeCLIP2.79□□□□□ -1.96
AP000641.1-201ENST00000531988 UTP20O75691 2785 aaKnown RBP2.79□□□□□ -1.96
AP000641.1-201ENST00000531988 TLN1Q9Y490 2541 aaKnown RBP2.79□□□□□ -1.96
AP000641.1-201ENST00000531988 BSNQ9UPA5 3926 aa2.79□□□□□ -1.96
AP000641.1-201ENST00000531988 ITPR3Q14573 2671 aa2.78□□□□□ -1.96
AP000641.1-201ENST00000531988 KRTAP10-1P60331 282 aa2.78□□□□□ -1.96
AP000641.1-201ENST00000531988 DNAH8Q96JB1 4490 aa2.77□□□□□ -1.97
AP000641.1-201ENST00000531988 MAST4O15021 2626 aa2.77□□□□□ -1.97
AP000641.1-201ENST00000531988 COL7A1Q02388 2944 aa2.77□□□□□ -1.97
AP000641.1-201ENST00000531988 PIEZO1Q92508 2521 aa2.77□□□□□ -1.97
AP000641.1-201ENST00000531988 MUC3AQ02505 3323 aa2.77□□□□□ -1.97
AP000641.1-201ENST00000531988 USP9XQ93008 2570 aaPredicted RBP2.76□□□□□ -1.97
AP000641.1-201ENST00000531988 SPTAN1Q13813 2472 aaKnown RBP2.75□□□□□ -1.97
AP000641.1-201ENST00000531988 LYSTQ99698 3801 aa2.74□□□□□ -1.97
AP000641.1-201ENST00000531988 LRRK2Q5S007 2527 aa2.74□□□□□ -1.97
AP000641.1-201ENST00000531988 USP9YO00507 2555 aaPredicted RBP2.74□□□□□ -1.97
AP000641.1-201ENST00000531988 RPS29P62273 56 aaKnown RBP2.73□□□□□ -1.97
AP000641.1-201ENST00000531988 CSMD3Q7Z407 3707 aa2.73□□□□□ -1.97
AP000641.1-201ENST00000531988 ZNF292O60281 2723 aa2.73□□□□□ -1.97
AP000641.1-201ENST00000531988 TRRAPQ9Y4A5 3859 aa2.73□□□□□ -1.97
AP000641.1-201ENST00000531988 HECTD1Q9ULT8 2610 aa2.72□□□□□ -1.97
AP000641.1-201ENST00000531988 CENPEQ02224 2701 aa2.71□□□□□ -1.98
AP000641.1-201ENST00000531988 CFAP46Q8IYW2 2715 aa2.71□□□□□ -1.98
AP000641.1-201ENST00000531988 DNAH1Q9P2D7 4330 aa2.71□□□□□ -1.98
AP000641.1-201ENST00000531988 ADGRG4Q8IZF6 3080 aa2.71□□□□□ -1.98
AP000641.1-201ENST00000531988 HELZ2Q9BYK8 2649 aaKnown RBP2.7□□□□□ -1.98
AP000641.1-201ENST00000531988 PDZD2O15018 2839 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms