RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
AC055878.1-201ENST00000531858 APC2O95996 2303 aa0.3□□□□□ -2.36
AC055878.1-201ENST00000531858 NDUFA1O15239 70 aa0.3□□□□□ -2.36
AC055878.1-201ENST00000531858 MAP1BP46821 2468 aaKnown RBP0.3□□□□□ -2.36
AC055878.1-201ENST00000531858 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
AC055878.1-201ENST00000531858 IGSF10Q6WRI0 2623 aa0.29□□□□□ -2.36
AC055878.1-201ENST00000531858 SETXQ7Z333 2677 aaKnown RBP0.29□□□□□ -2.36
AC055878.1-201ENST00000531858 M0QZ58 72 aa0.28□□□□□ -2.36
AC055878.1-201ENST00000531858 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
AC055878.1-201ENST00000531858 WNK1Q9H4A3 2382 aa0.27□□□□□ -2.37
AC055878.1-201ENST00000531858 DDX60Q8IY21 1712 aaKnown RBP0.27□□□□□ -2.37
AC055878.1-201ENST00000531858 CELSR1Q9NYQ6 3014 aa0.26□□□□□ -2.37
AC055878.1-201ENST00000531858 KMT2DO14686 5537 aa0.26□□□□□ -2.37
AC055878.1-201ENST00000531858 MT1AP04731 61 aa0.26□□□□□ -2.37
AC055878.1-201ENST00000531858 TNP1P09430 55 aa0.26□□□□□ -2.37
AC055878.1-201ENST00000531858 KRTAP6-2Q3LI66 62 aa0.26□□□□□ -2.37
AC055878.1-201ENST00000531858 HSPG2P98160 4391 aa0.26□□□□□ -2.37
AC055878.1-201ENST00000531858 SAMD9LQ8IVG5 1584 aa0.26□□□□□ -2.37
AC055878.1-201ENST00000531858 PKD1L2Q7Z442 2459 aa0.25□□□□□ -2.37
AC055878.1-201ENST00000531858 TNRC18O15417 2968 aaPredicted RBP0.24□□□□□ -2.37
AC055878.1-201ENST00000531858 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
AC055878.1-201ENST00000531858 SPRR2EP22531 72 aa0.23□□□□□ -2.37
AC055878.1-201ENST00000531858 DMBT1Q9UGM3 2413 aaPredicted RBP0.23□□□□□ -2.37
AC055878.1-201ENST00000531858 LRP1BQ9NZR2 4599 aa0.22□□□□□ -2.37
AC055878.1-201ENST00000531858 CEP290O15078 2479 aa0.21□□□□□ -2.38
AC055878.1-201ENST00000531858 FLNBO75369 2602 aaKnown RBP0.21□□□□□ -2.38
AC055878.1-201ENST00000531858 CLTCL1P53675 1640 aa0.2□□□□□ -2.38
AC055878.1-201ENST00000531858 DEFB110Q30KQ9 67 aa0.2□□□□□ -2.38
AC055878.1-201ENST00000531858 PKD1P98161 4303 aa0.19□□□□□ -2.38
AC055878.1-201ENST00000531858 NSD1Q96L73 2696 aaPredicted RBP0.19□□□□□ -2.38
AC055878.1-201ENST00000531858 MAST4O15021 2626 aa0.19□□□□□ -2.38
AC055878.1-201ENST00000531858 NBASA2RRP1 2371 aa0.19□□□□□ -2.38
AC055878.1-201ENST00000531858 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
AC055878.1-201ENST00000531858 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
AC055878.1-201ENST00000531858 TOP2AP11388 1531 aaKnown RBP0.18□□□□□ -2.38
AC055878.1-201ENST00000531858 SONP18583 2426 aaKnown RBP0.17□□□□□ -2.38
AC055878.1-201ENST00000531858 FLNCQ14315 2725 aa0.17□□□□□ -2.38
AC055878.1-201ENST00000531858 SPTBN4Q9H254 2564 aa0.17□□□□□ -2.38
AC055878.1-201ENST00000531858 COL6A3P12111 3177 aa0.16□□□□□ -2.38
AC055878.1-201ENST00000531858 STAB1Q9NY15 2570 aa0.16□□□□□ -2.38
AC055878.1-201ENST00000531858 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
AC055878.1-201ENST00000531858 LRP2P98164 4655 aa0.15□□□□□ -2.39
AC055878.1-201ENST00000531858 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
AC055878.1-201ENST00000531858 LYSTQ99698 3801 aa0.15□□□□□ -2.39
AC055878.1-201ENST00000531858 PKHD1P08F94 4074 aa0.14□□□□□ -2.39
AC055878.1-201ENST00000531858 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
AC055878.1-201ENST00000531858 COL7A1Q02388 2944 aa0.13□□□□□ -2.39
AC055878.1-201ENST00000531858 ANK3Q12955 4377 aaKnown RBP0.12□□□□□ -2.39
AC055878.1-201ENST00000531858 VPS13BQ7Z7G8 4022 aa0.11□□□□□ -2.39
AC055878.1-201ENST00000531858 NF1P21359 2839 aa0.11□□□□□ -2.39
AC055878.1-201ENST00000531858 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
AC055878.1-201ENST00000531858 SACSQ9NZJ4 4579 aa0.1□□□□□ -2.39
AC055878.1-201ENST00000531858 MTORP42345 2549 aa0.1□□□□□ -2.39
AC055878.1-201ENST00000531858 FLNAP21333 2647 aaKnown RBP0.1□□□□□ -2.39
AC055878.1-201ENST00000531858 KRTAP8-1Q8IUC2 63 aa0.09□□□□□ -2.4
AC055878.1-201ENST00000531858 SETD2Q9BYW2 2564 aaPredicted RBP0.09□□□□□ -2.4
AC055878.1-201ENST00000531858 CUBNO60494 3623 aa0.08□□□□□ -2.4
AC055878.1-201ENST00000531858 POLR2KP53803 58 aaKnown RBP0.08□□□□□ -2.4
AC055878.1-201ENST00000531858 CLPSL2Q6UWE3 100 aa0.08□□□□□ -2.4
AC055878.1-201ENST00000531858 MACF1Q9UPN3 7388 aaKnown RBP0.08□□□□□ -2.4
AC055878.1-201ENST00000531858 DNAH9Q9NYC9 4486 aa0.08□□□□□ -2.4
AC055878.1-201ENST00000531858 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
AC055878.1-201ENST00000531858 PKHD1L1Q86WI1 4243 aa0.07□□□□□ -2.4
AC055878.1-201ENST00000531858 DNAH3Q8TD57 4116 aa0.07□□□□□ -2.4
AC055878.1-201ENST00000531858 FAT3Q8TDW7 4589 aa0.06□□□□□ -2.4
AC055878.1-201ENST00000531858 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
AC055878.1-201ENST00000531858 SVEP1Q4LDE5 3571 aa0.04□□□□□ -2.4
AC055878.1-201ENST00000531858 GCN1Q92616 2671 aaKnown RBP0.03□□□□□ -2.4
AC055878.1-201ENST00000531858 ANKRD11Q6UB99 2663 aaPredicted RBP0.02□□□□□ -2.41
AC055878.1-201ENST00000531858 TENM2Q9NT68 2774 aa0.02□□□□□ -2.41
AC055878.1-201ENST00000531858 ZANQ9Y493 2812 aa0.02□□□□□ -2.41
AC055878.1-201ENST00000531858 ACACAQ13085 2346 aa0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 SPG11Q96JI7 2443 aa0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 ANKHD1Q8IWZ3 2542 aaKnown RBP0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 APOBP04114 4563 aaKnown RBP0□□□□□ -2.41
AC055878.1-201ENST00000531858 SPART-AS1P0CW21 52 aa0□□□□□ -2.41
AC055878.1-201ENST00000531858 KRTAP19-5Q3LI72 72 aa0□□□□□ -2.41
AC055878.1-201ENST00000531858 DMXL1Q9Y485 3027 aa-0□□□□□ -2.41
AC055878.1-201ENST00000531858 ZZEF1O43149 2961 aa-0□□□□□ -2.41
AC055878.1-201ENST00000531858 DNAH2Q9P225 4427 aa-0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 PDZD2O15018 2839 aa-0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 TGP01266 2768 aa-0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 A0A0C4DFX4 3053 aa-0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 TEP1Q99973 2627 aaKnown RBP-0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 EPG5Q9HCE0 2579 aa-0.01□□□□□ -2.41
AC055878.1-201ENST00000531858 TACC2O95359 2948 aa-0.02□□□□□ -2.41
AC055878.1-201ENST00000531858 SRRM2Q9UQ35 2752 aaKnown RBP-0.04□□□□□ -2.42
AC055878.1-201ENST00000531858 STAB2Q8WWQ8 2551 aa-0.04□□□□□ -2.42
AC055878.1-201ENST00000531858 SNRPGP62308 76 aaKnown RBP-0.04□□□□□ -2.42
AC055878.1-201ENST00000531858 DNAH11Q96DT5 4516 aa-0.05□□□□□ -2.42
AC055878.1-201ENST00000531858 ACACBO00763 2458 aa-0.05□□□□□ -2.42
AC055878.1-201ENST00000531858 SMR3BP02814 79 aaPredicted RBP-0.05□□□□□ -2.42
AC055878.1-201ENST00000531858 RANBP2P49792 3224 aaKnown RBP-0.05□□□□□ -2.42
AC055878.1-201ENST00000531858 MAP1AP78559 2803 aaPredicted RBP-0.06□□□□□ -2.42
AC055878.1-201ENST00000531858 FAM186AA6NE01 2351 aa-0.06□□□□□ -2.42
AC055878.1-201ENST00000531858 UTP20O75691 2785 aaKnown RBP-0.06□□□□□ -2.42
AC055878.1-201ENST00000531858 MROH2BQ7Z745 1585 aa-0.06□□□□□ -2.42
AC055878.1-201ENST00000531858 FASNP49327 2511 aaKnown RBP-0.07□□□□□ -2.42
AC055878.1-201ENST00000531858 LRRK2Q5S007 2527 aa-0.08□□□□□ -2.42
AC055878.1-201ENST00000531858 VPS13DQ5THJ4 4388 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms