RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 DEFB116Q30KQ4 102 aa5.69□□□□□ -1.5
NPIPA3-202ENST00000531598 HRCT1Q6UXD1 115 aa5.69□□□□□ -1.5
NPIPA3-202ENST00000531598 TMEM254Q8TBM7 123 aa5.69□□□□□ -1.5
NPIPA3-202ENST00000531598 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
NPIPA3-202ENST00000531598 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
NPIPA3-202ENST00000531598 MP68P56378 58 aa5.68□□□□□ -1.5
NPIPA3-202ENST00000531598 hDV103S1A0JD37 113 aa5.67□□□□□ -1.5
NPIPA3-202ENST00000531598 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
NPIPA3-202ENST00000531598 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
NPIPA3-202ENST00000531598 A0A087X002 238 aa5.66□□□□□ -1.5
NPIPA3-202ENST00000531598 MMP24-AS1A0A0U1RRL7 71 aa5.66□□□□□ -1.5
NPIPA3-202ENST00000531598 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
NPIPA3-202ENST00000531598 C8orf17Q9NRJ1 99 aa5.66□□□□□ -1.5
NPIPA3-202ENST00000531598 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
NPIPA3-202ENST00000531598 A0A0U1RQV1 116 aa5.64□□□□□ -1.51
NPIPA3-202ENST00000531598 HYDINQ4G0P3 5121 aa5.64□□□□□ -1.51
NPIPA3-202ENST00000531598 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
NPIPA3-202ENST00000531598 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
NPIPA3-202ENST00000531598 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
NPIPA3-202ENST00000531598 MRPL34Q9BQ48 92 aaKnown RBP5.62□□□□□ -1.51
NPIPA3-202ENST00000531598 FAM236DA0A1B0GTK5 79 aa5.61□□□□□ -1.51
NPIPA3-202ENST00000531598 H7BZZ5 65 aa5.61□□□□□ -1.51
NPIPA3-202ENST00000531598 FAM236CP0DP71 79 aa5.61□□□□□ -1.51
NPIPA3-202ENST00000531598 LINC00304Q8N9R0 145 aa5.61□□□□□ -1.51
NPIPA3-202ENST00000531598 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
NPIPA3-202ENST00000531598 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
NPIPA3-202ENST00000531598 SNURFQ9Y675 71 aa5.6□□□□□ -1.51
NPIPA3-202ENST00000531598 TRAV22A0A0B4J277 110 aa5.59□□□□□ -1.51
NPIPA3-202ENST00000531598 C1orf195Q5TG92 126 aa5.59□□□□□ -1.51
NPIPA3-202ENST00000531598 H0Y9P7 68 aa5.58□□□□□ -1.52
NPIPA3-202ENST00000531598 SMR3BP02814 79 aaPredicted RBP5.58□□□□□ -1.52
NPIPA3-202ENST00000531598 LINC00313P59037 77 aa5.58□□□□□ -1.52
NPIPA3-202ENST00000531598 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
NPIPA3-202ENST00000531598 DYNC1H1Q14204 4646 aaKnown RBP5.57□□□□□ -1.52
NPIPA3-202ENST00000531598 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
NPIPA3-202ENST00000531598 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
NPIPA3-202ENST00000531598 SRRM2Q9UQ35 2752 aaKnown RBP5.56□□□□□ -1.52
NPIPA3-202ENST00000531598 NDUFS5O43920 106 aa5.55□□□□□ -1.52
NPIPA3-202ENST00000531598 PRR26Q8N8Z3 221 aa5.55□□□□□ -1.52
NPIPA3-202ENST00000531598 CYSTM1Q9H1C7 97 aa5.55□□□□□ -1.52
NPIPA3-202ENST00000531598 RYR2Q92736 4967 aa5.55□□□□□ -1.52
NPIPA3-202ENST00000531598 LINC00208Q96KT6 92 aa5.54□□□□□ -1.52
NPIPA3-202ENST00000531598 SERP1Q9Y6X1 66 aa5.54□□□□□ -1.52
NPIPA3-202ENST00000531598 VPS13BQ7Z7G8 4022 aa5.53□□□□□ -1.52
NPIPA3-202ENST00000531598 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
NPIPA3-202ENST00000531598 SPANXA2-OT1Q8N9U9 137 aa5.53□□□□□ -1.52
NPIPA3-202ENST00000531598 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
NPIPA3-202ENST00000531598 LOC101927531A0A1B0GV80 90 aa5.52□□□□□ -1.53
NPIPA3-202ENST00000531598 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
NPIPA3-202ENST00000531598 Q5VSD8 79 aa5.49□□□□□ -1.53
NPIPA3-202ENST00000531598 CYP4F30PQ9H0H9 118 aa5.49□□□□□ -1.53
NPIPA3-202ENST00000531598 PKHD1P08F94 4074 aa5.48□□□□□ -1.53
NPIPA3-202ENST00000531598 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
NPIPA3-202ENST00000531598 NOTCH2NLQ7Z3S9 236 aa5.46□□□□□ -1.54
NPIPA3-202ENST00000531598 KRTAP16-1A8MUX0 517 aa5.44□□□□□ -1.54
NPIPA3-202ENST00000531598 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
NPIPA3-202ENST00000531598 Q8N1X5 172 aa5.44□□□□□ -1.54
NPIPA3-202ENST00000531598 IGLV7-46A0A075B6I9 117 aa5.43□□□□□ -1.54
NPIPA3-202ENST00000531598 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
NPIPA3-202ENST00000531598 KRTAP10-8P60410 259 aa5.43□□□□□ -1.54
NPIPA3-202ENST00000531598 KRTAP13-3Q3SY46 172 aa5.42□□□□□ -1.54
NPIPA3-202ENST00000531598 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
NPIPA3-202ENST00000531598 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
NPIPA3-202ENST00000531598 OXTP01178 125 aa5.38□□□□□ -1.55
NPIPA3-202ENST00000531598 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
NPIPA3-202ENST00000531598 Q5W150 140 aa5.38□□□□□ -1.55
NPIPA3-202ENST00000531598 IGKV2-30P06310 120 aa5.37□□□□□ -1.55
NPIPA3-202ENST00000531598 C20orf166-AS1Q96NR2 134 aa5.37□□□□□ -1.55
NPIPA3-202ENST00000531598 A8MUU9 505 aa5.36□□□□□ -1.55
NPIPA3-202ENST00000531598 PCOTHQ58A44 107 aa5.35□□□□□ -1.55
NPIPA3-202ENST00000531598 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
NPIPA3-202ENST00000531598 V9GYY9 64 aa5.35□□□□□ -1.55
NPIPA3-202ENST00000531598 FAT1Q14517 4588 aa5.34□□□□□ -1.56
NPIPA3-202ENST00000531598 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
NPIPA3-202ENST00000531598 Q75L30 129 aa5.33□□□□□ -1.56
NPIPA3-202ENST00000531598 ACYP2P14621 99 aa5.31□□□□□ -1.56
NPIPA3-202ENST00000531598 HSPG2P98160 4391 aa5.31□□□□□ -1.56
NPIPA3-202ENST00000531598 A8MUN3 132 aa5.29□□□□□ -1.56
NPIPA3-202ENST00000531598 PRR4Q16378 134 aa5.29□□□□□ -1.56
NPIPA3-202ENST00000531598 RYR1P21817 5038 aa5.29□□□□□ -1.56
NPIPA3-202ENST00000531598 IGKV2D-30A0A075B6S6 120 aa5.28□□□□□ -1.56
NPIPA3-202ENST00000531598 HRES1P13985 223 aa5.28□□□□□ -1.56
NPIPA3-202ENST00000531598 COA5Q86WW8 74 aa5.28□□□□□ -1.56
NPIPA3-202ENST00000531598 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
NPIPA3-202ENST00000531598 C9orf92A6NGG3 77 aa5.27□□□□□ -1.57
NPIPA3-202ENST00000531598 RYR3Q15413 4870 aa5.27□□□□□ -1.57
NPIPA3-202ENST00000531598 Q1T7F1 81 aa5.27□□□□□ -1.57
NPIPA3-202ENST00000531598 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
NPIPA3-202ENST00000531598 MT1HL1P0DM35 61 aa5.26□□□□□ -1.57
NPIPA3-202ENST00000531598 ATP11AUNQ6ZP68 121 aa5.25□□□□□ -1.57
NPIPA3-202ENST00000531598 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
NPIPA3-202ENST00000531598 TNXBP22105 4242 aa5.22□□□□□ -1.57
NPIPA3-202ENST00000531598 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
NPIPA3-202ENST00000531598 FLG2Q5D862 2391 aaPredicted RBP5.21□□□□□ -1.57
NPIPA3-202ENST00000531598 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
NPIPA3-202ENST00000531598 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
NPIPA3-202ENST00000531598 SPTSSBQ8NFR3 76 aa5.2□□□□□ -1.58
NPIPA3-202ENST00000531598 MPLKIPQ8TAP9 179 aa5.19□□□□□ -1.58
NPIPA3-202ENST00000531598 SPINK7P58062 85 aa5.18□□□□□ -1.58
NPIPA3-202ENST00000531598 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms