RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 TMEM258P61165 79 aa3.23□□□□□ -1.89
VPS11-204ENST00000530809 LINC00483Q53H64 154 aa3.23□□□□□ -1.89
VPS11-204ENST00000530809 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
VPS11-204ENST00000530809 J3KT08 172 aa3.22□□□□□ -1.89
VPS11-204ENST00000530809 NDUFC1O43677 76 aa3.22□□□□□ -1.89
VPS11-204ENST00000530809 IGKV4-1P06312 121 aa3.22□□□□□ -1.89
VPS11-204ENST00000530809 PRR26Q8N8Z3 221 aa3.22□□□□□ -1.89
VPS11-204ENST00000530809 SS18L2Q9UHA2 77 aa3.22□□□□□ -1.89
VPS11-204ENST00000530809 ZNF861PO60384 105 aa3.21□□□□□ -1.9
VPS11-204ENST00000530809 KLKP1Q107X0 134 aa3.21□□□□□ -1.9
VPS11-204ENST00000530809 A0A087WSZ3 146 aa3.2□□□□□ -1.9
VPS11-204ENST00000530809 IGLV7-43P04211 117 aa3.2□□□□□ -1.9
VPS11-204ENST00000530809 ATP5EP56381 51 aaPredicted RBP3.2□□□□□ -1.9
VPS11-204ENST00000530809 LPAP08519 4548 aa3.2□□□□□ -1.9
VPS11-204ENST00000530809 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
VPS11-204ENST00000530809 KRTAP3-1Q9BYR8 98 aa3.19□□□□□ -1.9
VPS11-204ENST00000530809 HCG22E2RYF7 251 aa3.18□□□□□ -1.9
VPS11-204ENST00000530809 OCR1Q9BZK8 76 aa3.18□□□□□ -1.9
VPS11-204ENST00000530809 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
VPS11-204ENST00000530809 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
VPS11-204ENST00000530809 A8MWP4 228 aa3.17□□□□□ -1.9
VPS11-204ENST00000530809 NDUFB1O75438 58 aa3.17□□□□□ -1.9
VPS11-204ENST00000530809 KRTAP1-4P0C5Y4 121 aa3.17□□□□□ -1.9
VPS11-204ENST00000530809 DSCR10P59022 87 aa3.17□□□□□ -1.9
VPS11-204ENST00000530809 CD164Q04900 197 aa3.17□□□□□ -1.9
VPS11-204ENST00000530809 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
VPS11-204ENST00000530809 K7EQZ3 153 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
VPS11-204ENST00000530809 MOBPQ13875 183 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 FAM229BQ4G0N7 80 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 PRR15Q8IV56 129 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 TMEM254Q8TBM7 123 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 MUC2Q02817 5179 aa3.16□□□□□ -1.9
VPS11-204ENST00000530809 FAM236DA0A1B0GTK5 79 aa3.15□□□□□ -1.91
VPS11-204ENST00000530809 H3BPC8 53 aa3.15□□□□□ -1.91
VPS11-204ENST00000530809 FAM236CP0DP71 79 aa3.15□□□□□ -1.91
VPS11-204ENST00000530809 TPRXLQ17RH7 258 aa3.15□□□□□ -1.91
VPS11-204ENST00000530809 C5orf47Q569G3 176 aa3.15□□□□□ -1.91
VPS11-204ENST00000530809 SSBP3-AS1Q7Z2R9 100 aa3.15□□□□□ -1.91
VPS11-204ENST00000530809 Q8N9L7 120 aa3.15□□□□□ -1.91
VPS11-204ENST00000530809 IGLV9-49A0A0B4J1Y8 123 aa3.14□□□□□ -1.91
VPS11-204ENST00000530809 H7BZZ5 65 aa3.14□□□□□ -1.91
VPS11-204ENST00000530809 ASB16-AS1Q495Z4 193 aa3.14□□□□□ -1.91
VPS11-204ENST00000530809 MP68P56378 58 aa3.13□□□□□ -1.91
VPS11-204ENST00000530809 CASC2Q6XLA1 102 aa3.13□□□□□ -1.91
VPS11-204ENST00000530809 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
VPS11-204ENST00000530809 TP53AIP1Q9HCN2 124 aa3.13□□□□□ -1.91
VPS11-204ENST00000530809 Q5XG85 94 aa3.12□□□□□ -1.91
VPS11-204ENST00000530809 MMP24-AS1A0A0U1RRL7 71 aa3.11□□□□□ -1.91
VPS11-204ENST00000530809 TYMSOSQ8TAI1 123 aa3.11□□□□□ -1.91
VPS11-204ENST00000530809 Q96NJ1 140 aa3.11□□□□□ -1.91
VPS11-204ENST00000530809 LIMD2Q9BT23 127 aa3.11□□□□□ -1.91
VPS11-204ENST00000530809 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
VPS11-204ENST00000530809 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
VPS11-204ENST00000530809 A0A0G2JQZ4 141 aa3.1□□□□□ -1.91
VPS11-204ENST00000530809 A0A1B0GVX0 72 aa3.1□□□□□ -1.91
VPS11-204ENST00000530809 hDV103S1A0JD37 113 aa3.1□□□□□ -1.91
VPS11-204ENST00000530809 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
VPS11-204ENST00000530809 ZCCHC13Q8WW36 166 aaKnown RBP3.1□□□□□ -1.91
VPS11-204ENST00000530809 SNURFQ9Y675 71 aa3.1□□□□□ -1.91
VPS11-204ENST00000530809 IGLV7-46A0A075B6I9 117 aa3.09□□□□□ -1.91
VPS11-204ENST00000530809 TRAV22A0A0B4J277 110 aa3.09□□□□□ -1.91
VPS11-204ENST00000530809 RPS29P62273 56 aaKnown RBP3.09□□□□□ -1.91
VPS11-204ENST00000530809 WFDC13Q8IUB5 93 aa3.09□□□□□ -1.91
VPS11-204ENST00000530809 C8orf17Q9NRJ1 99 aa3.09□□□□□ -1.91
VPS11-204ENST00000530809 A0A087X002 238 aa3.08□□□□□ -1.92
VPS11-204ENST00000530809 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
VPS11-204ENST00000530809 SPANXA2-OT1Q8N9U9 137 aa3.08□□□□□ -1.92
VPS11-204ENST00000530809 RETNLBQ9BQ08 111 aa3.08□□□□□ -1.92
VPS11-204ENST00000530809 H0Y9P7 68 aa3.07□□□□□ -1.92
VPS11-204ENST00000530809 DEFB116Q30KQ4 102 aa3.07□□□□□ -1.92
VPS11-204ENST00000530809 LINC00304Q8N9R0 145 aa3.07□□□□□ -1.92
VPS11-204ENST00000530809 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
VPS11-204ENST00000530809 SPAG11AQ6PDA7 123 aa3.06□□□□□ -1.92
VPS11-204ENST00000530809 HRCT1Q6UXD1 115 aa3.06□□□□□ -1.92
VPS11-204ENST00000530809 CYP4F30PQ9H0H9 118 aa3.06□□□□□ -1.92
VPS11-204ENST00000530809 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
VPS11-204ENST00000530809 IGHV6-1A0A0B4J1U7 121 aa3.05□□□□□ -1.92
VPS11-204ENST00000530809 SPINK1P00995 79 aa3.05□□□□□ -1.92
VPS11-204ENST00000530809 SEC61BP60468 96 aaKnown RBP3.05□□□□□ -1.92
VPS11-204ENST00000530809 FP248Q71RG6 208 aaPredicted RBP3.05□□□□□ -1.92
VPS11-204ENST00000530809 KRTAP13-2Q52LG2 175 aa3.04□□□□□ -1.92
VPS11-204ENST00000530809 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
VPS11-204ENST00000530809 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
VPS11-204ENST00000530809 LINC00208Q96KT6 92 aa3.04□□□□□ -1.92
VPS11-204ENST00000530809 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
VPS11-204ENST00000530809 LOC101927531A0A1B0GV80 90 aa3.03□□□□□ -1.92
VPS11-204ENST00000530809 KRTAP9-7A8MTY7 169 aa3.03□□□□□ -1.92
VPS11-204ENST00000530809 NDUFS5O43920 106 aa3.02□□□□□ -1.93
VPS11-204ENST00000530809 KRTAP13-3Q3SY46 172 aa3.02□□□□□ -1.93
VPS11-204ENST00000530809 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
VPS11-204ENST00000530809 LINC00313P59037 77 aa3.01□□□□□ -1.93
VPS11-204ENST00000530809 C1orf195Q5TG92 126 aa3.01□□□□□ -1.93
VPS11-204ENST00000530809 Q8N9P0 234 aaPredicted RBP3□□□□□ -1.93
VPS11-204ENST00000530809 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
VPS11-204ENST00000530809 V9GYY9 64 aa3□□□□□ -1.93
VPS11-204ENST00000530809 MT1HP80294 61 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms