RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 TRAV22A0A0B4J277 110 aa12.69□□□□□ -0.38
RDX-211ENST00000530749 CDK2AP2O75956 126 aa12.69□□□□□ -0.38
RDX-211ENST00000530749 KRTAP13-2Q52LG2 175 aa12.69□□□□□ -0.38
RDX-211ENST00000530749 FP248Q71RG6 208 aaPredicted RBP12.69□□□□□ -0.38
RDX-211ENST00000530749 SMIM26A0A096LP01 95 aa12.68□□□□□ -0.38
RDX-211ENST00000530749 NDUFS5O43920 106 aa12.65□□□□□ -0.39
RDX-211ENST00000530749 C1orf64Q8NEQ6 169 aa12.65□□□□□ -0.39
RDX-211ENST00000530749 SSBP3-AS1Q7Z2R9 100 aa12.64□□□□□ -0.39
RDX-211ENST00000530749 KRTAP1-4P0C5Y4 121 aa12.59□□□□□ -0.39
RDX-211ENST00000530749 CD164Q04900 197 aa12.59□□□□□ -0.39
RDX-211ENST00000530749 MRPL34Q9BQ48 92 aaKnown RBP12.59□□□□□ -0.39
RDX-211ENST00000530749 H3BPC8 53 aa12.56□□□□□ -0.4
RDX-211ENST00000530749 MPLKIPQ8TAP9 179 aa12.55□□□□□ -0.4
RDX-211ENST00000530749 TP53AIP1Q9HCN2 124 aa12.54□□□□□ -0.4
RDX-211ENST00000530749 PCOTHQ58A44 107 aa12.52□□□□□ -0.41
RDX-211ENST00000530749 CYP4F30PQ9H0H9 118 aa12.52□□□□□ -0.41
RDX-211ENST00000530749 DYNC1H1Q14204 4646 aaKnown RBP12.48□□□□□ -0.41
RDX-211ENST00000530749 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
RDX-211ENST00000530749 PLA2G1BP04054 148 aaKnown RBP12.47□□□□□ -0.41
RDX-211ENST00000530749 SMR3BP02814 79 aaPredicted RBP12.47□□□□□ -0.41
RDX-211ENST00000530749 Q5W150 140 aa12.45□□□□□ -0.42
RDX-211ENST00000530749 SPANXA2-OT1Q8N9U9 137 aa12.43□□□□□ -0.42
RDX-211ENST00000530749 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
RDX-211ENST00000530749 LINC00313P59037 77 aa12.38□□□□□ -0.43
RDX-211ENST00000530749 FAT1Q14517 4588 aa12.38□□□□□ -0.43
RDX-211ENST00000530749 KMT2CQ8NEZ4 4911 aaKnown RBP12.37□□□□□ -0.43
RDX-211ENST00000530749 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
RDX-211ENST00000530749 RYR2Q92736 4967 aa12.35□□□□□ -0.43
RDX-211ENST00000530749 A0A1B0GVY2 172 aa12.35□□□□□ -0.43
RDX-211ENST00000530749 LINC00336Q6ZUF6 198 aa12.35□□□□□ -0.43
RDX-211ENST00000530749 PRR26Q8N8Z3 221 aa12.35□□□□□ -0.43
RDX-211ENST00000530749 IGLV7-46A0A075B6I9 117 aa12.34□□□□□ -0.43
RDX-211ENST00000530749 KRTAP13-3Q3SY46 172 aa12.34□□□□□ -0.43
RDX-211ENST00000530749 RETNLBQ9BQ08 111 aa12.34□□□□□ -0.43
RDX-211ENST00000530749 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
RDX-211ENST00000530749 LIMD2Q9BT23 127 aa12.31□□□□□ -0.44
RDX-211ENST00000530749 C4orf48Q5BLP8 95 aa12.31□□□□□ -0.44
RDX-211ENST00000530749 Q8N9P0 234 aaPredicted RBP12.27□□□□□ -0.45
RDX-211ENST00000530749 KRTAP16-1A8MUX0 517 aa12.26□□□□□ -0.45
RDX-211ENST00000530749 Q1T7F1 81 aa12.25□□□□□ -0.45
RDX-211ENST00000530749 COA5Q86WW8 74 aa12.25□□□□□ -0.45
RDX-211ENST00000530749 LOC101927531A0A1B0GV80 90 aa12.24□□□□□ -0.45
RDX-211ENST00000530749 SPINK1P00995 79 aa12.23□□□□□ -0.45
RDX-211ENST00000530749 PSPHP1O15172 72 aa12.22□□□□□ -0.45
RDX-211ENST00000530749 LINC00304Q8N9R0 145 aa12.21□□□□□ -0.45
RDX-211ENST00000530749 PRO0628Q9UI54 55 aa12.21□□□□□ -0.45
RDX-211ENST00000530749 KRTAP10-4P60372 401 aaPredicted RBP12.21□□□□□ -0.46
RDX-211ENST00000530749 FAM229AH3BQW9 127 aa12.16□□□□□ -0.46
RDX-211ENST00000530749 V9GYY9 64 aa12.15□□□□□ -0.46
RDX-211ENST00000530749 HRES1P13985 223 aa12.14□□□□□ -0.47
RDX-211ENST00000530749 BRK1Q8WUW1 75 aa12.13□□□□□ -0.47
RDX-211ENST00000530749 A8MUN3 132 aa12.12□□□□□ -0.47
RDX-211ENST00000530749 IGKV2-30P06310 120 aa12.07□□□□□ -0.48
RDX-211ENST00000530749 PKHD1L1Q86WI1 4243 aa12.05□□□□□ -0.48
RDX-211ENST00000530749 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
RDX-211ENST00000530749 IGKV2D-30A0A075B6S6 120 aa12.04□□□□□ -0.48
RDX-211ENST00000530749 RPS29P62273 56 aaKnown RBP12.02□□□□□ -0.49
RDX-211ENST00000530749 Q5VV11 94 aa12□□□□□ -0.49
RDX-211ENST00000530749 PRR15LQ9BU68 103 aa12□□□□□ -0.49
RDX-211ENST00000530749 RYR3Q15413 4870 aa12□□□□□ -0.49
RDX-211ENST00000530749 C9orf92A6NGG3 77 aa11.99□□□□□ -0.49
RDX-211ENST00000530749 LRP1Q07954 4544 aaKnown RBP11.95□□□□□ -0.5
RDX-211ENST00000530749 DMAC1Q96GE9 116 aa11.93□□□□□ -0.5
RDX-211ENST00000530749 ACYP2P14621 99 aa11.91□□□□□ -0.5
RDX-211ENST00000530749 A8MU10 97 aa11.89□□□□□ -0.51
RDX-211ENST00000530749 CHKB-CPT1BH3BT56 60 aa11.88□□□□□ -0.51
RDX-211ENST00000530749 HSPG2P98160 4391 aa11.88□□□□□ -0.51
RDX-211ENST00000530749 FLG2Q5D862 2391 aaPredicted RBP11.87□□□□□ -0.51
RDX-211ENST00000530749 LINC01558Q9Y6Z2 57 aa11.85□□□□□ -0.51
RDX-211ENST00000530749 Q8N1X5 172 aa11.81□□□□□ -0.52
RDX-211ENST00000530749 Q5VSD8 79 aa11.81□□□□□ -0.52
RDX-211ENST00000530749 KRTAP17-1Q9BYP8 105 aa11.79□□□□□ -0.52
RDX-211ENST00000530749 Q75L30 129 aa11.79□□□□□ -0.52
RDX-211ENST00000530749 TNXBP22105 4242 aa11.79□□□□□ -0.52
RDX-211ENST00000530749 C7orf65Q6ZTY9 151 aa11.78□□□□□ -0.52
RDX-211ENST00000530749 C20orf166-AS1Q96NR2 134 aa11.76□□□□□ -0.53
RDX-211ENST00000530749 A8MUU9 505 aa11.75□□□□□ -0.53
RDX-211ENST00000530749 RYR1P21817 5038 aa11.75□□□□□ -0.53
RDX-211ENST00000530749 FAT3Q8TDW7 4589 aa11.73□□□□□ -0.53
RDX-211ENST00000530749 KIAA1109Q2LD37 5005 aa11.73□□□□□ -0.53
RDX-211ENST00000530749 A6NED7 52 aa11.73□□□□□ -0.53
RDX-211ENST00000530749 KRTAP10-8P60410 259 aa11.68□□□□□ -0.54
RDX-211ENST00000530749 LCA10Q71F78 164 aa11.68□□□□□ -0.54
RDX-211ENST00000530749 SPINK7P58062 85 aa11.68□□□□□ -0.54
RDX-211ENST00000530749 DMBT1Q9UGM3 2413 aaPredicted RBP11.67□□□□□ -0.54
RDX-211ENST00000530749 MYCBP2O75592 4640 aa11.63□□□□□ -0.55
RDX-211ENST00000530749 EPPK1P58107 5090 aaKnown RBP11.59□□□□□ -0.55
RDX-211ENST00000530749 SPTSSBQ8NFR3 76 aa11.54□□□□□ -0.56
RDX-211ENST00000530749 CDC42SE1Q9NRR8 79 aa11.54□□□□□ -0.56
RDX-211ENST00000530749 A0A1B0GU69 56 aa11.53□□□□□ -0.56
RDX-211ENST00000530749 KRTAP3-1Q9BYR8 98 aa11.52□□□□□ -0.56
RDX-211ENST00000530749 ATP11AUNQ6ZP68 121 aa11.49□□□□□ -0.57
RDX-211ENST00000530749 PMAIP1Q13794 54 aa11.47□□□□□ -0.57
RDX-211ENST00000530749 MT1HL1P0DM35 61 aa11.45□□□□□ -0.58
RDX-211ENST00000530749 XP32Q5T750 250 aa11.38□□□□□ -0.59
RDX-211ENST00000530749 RPL37P61927 97 aaKnown RBP11.34□□□□□ -0.59
RDX-211ENST00000530749 COX6B2Q6YFQ2 88 aa11.3□□□□□ -0.6
RDX-211ENST00000530749 KRTAP4-5Q9BYR2 181 aa11.26□□□□□ -0.61
RDX-211ENST00000530749 A6NN06 94 aa11.25□□□□□ -0.61
RDX-211ENST00000530749 UQCR11O14957 56 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms