RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 TNXBP22105 4242 aa4.77□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 IGHV6-1A0A0B4J1U7 121 aa4.76□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 ATP5EP2Q5VTU8 51 aa4.76□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 Q8N9L7 120 aa4.76□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 K7EQZ3 153 aa4.74□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 HIST1H4AP62805 103 aaKnown RBP4.74□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 PRR15Q8IV56 129 aa4.74□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 C8orf87E5RJ46 101 aa4.72□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 MT-ATP8P03928 68 aa4.72□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 LINC00313P59037 77 aa4.72□□□□□ -1.65
NEDD8-MDP1-201ENST00000530579 C8orf17Q9NRJ1 99 aa4.71□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 PCLOQ9Y6V0 5065 aa4.71□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 A0A087WVE0 104 aa4.68□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 HCG22E2RYF7 251 aa4.68□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 KRTAP13-3Q3SY46 172 aa4.68□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 CASC2Q6XLA1 102 aa4.68□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 IMUPQ9GZP8 106 aa4.68□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 hDV103S1A0JD37 113 aa4.67□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 TPRXLQ17RH7 258 aa4.66□□□□□ -1.66
NEDD8-MDP1-201ENST00000530579 TMEM254Q8TBM7 123 aa4.65□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 MRPL34Q9BQ48 92 aaKnown RBP4.65□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 KRTAP16-1A8MUX0 517 aa4.64□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 NDUFS5O43920 106 aa4.64□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 SCGB1A1P11684 91 aa4.63□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 XP32Q5T750 250 aa4.63□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 FAM236AA0A1B0GUQ0 79 aa4.6□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 FAM236BA0A1B0GV22 79 aa4.6□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 A8MUU9 505 aa4.6□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 C20orf166-AS1Q96NR2 134 aa4.6□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 Q75L30 129 aa4.59□□□□□ -1.67
NEDD8-MDP1-201ENST00000530579 ATP11AUNQ6ZP68 121 aa4.58□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 UQCRQO14949 82 aa4.55□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 PCOTHQ58A44 107 aa4.55□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 ZCCHC13Q8WW36 166 aaKnown RBP4.55□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 ATOX1O00244 68 aa4.54□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 SMIM20Q8N5G0 67 aa4.54□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 HERC1Q15751 4861 aa4.54□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 Q5W150 140 aa4.53□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 OCR1Q9BZK8 76 aa4.53□□□□□ -1.68
NEDD8-MDP1-201ENST00000530579 TRAV7A0A075B6U4 112 aa4.51□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 H0Y9P7 68 aa4.5□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 C5orf47Q569G3 176 aa4.5□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 LPAP08519 4548 aa4.5□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 HMCN2Q8NDA2 5059 aa4.5□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 MP68P56378 58 aa4.49□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 PCP4P48539 62 aa4.48□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 SERP2Q8N6R1 65 aa4.48□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 ANAPC13Q9BS18 74 aa4.48□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 LINC00208Q96KT6 92 aa4.47□□□□□ -1.69
NEDD8-MDP1-201ENST00000530579 SPINK7P58062 85 aa4.46□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 H3BPC8 53 aa4.44□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 COX7CP15954 63 aa4.43□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 C7orf65Q6ZTY9 151 aa4.43□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 LRP2P98164 4655 aa4.42□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
NEDD8-MDP1-201ENST00000530579 A0A0U1RQV1 116 aa4.4□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 CCDC179H3BU77 68 aa4.37□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 HRES1P13985 223 aa4.37□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 FAM236CP0DP71 79 aa4.34□□□□□ -1.71
NEDD8-MDP1-201ENST00000530579 NDUFC1O43677 76 aa4.32□□□□□ -1.72
NEDD8-MDP1-201ENST00000530579 COX6B2Q6YFQ2 88 aa4.32□□□□□ -1.72
NEDD8-MDP1-201ENST00000530579 MPLKIPQ8TAP9 179 aa4.31□□□□□ -1.72
NEDD8-MDP1-201ENST00000530579 UBR4Q5T4S7 5183 aa4.31□□□□□ -1.72
NEDD8-MDP1-201ENST00000530579 CYSTM1Q9H1C7 97 aa4.3□□□□□ -1.72
NEDD8-MDP1-201ENST00000530579 H7BZZ5 65 aa4.27□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 H1FX-AS1Q4G0G2 97 aa4.27□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 SPANXA2-OT1Q8N9U9 137 aa4.26□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 RNF213Q63HN8 5207 aa4.25□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 A8MUN3 132 aa4.25□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 ACYP2P14621 99 aa4.23□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 DMAC1Q96GE9 116 aa4.23□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 MUC2Q02817 5179 aa4.21□□□□□ -1.73
NEDD8-MDP1-201ENST00000530579 TMEM258P61165 79 aa4.2□□□□□ -1.74
NEDD8-MDP1-201ENST00000530579 S4R3F8 94 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms