RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 NOTCH2NLQ7Z3S9 236 aa11.47□□□□□ -0.57
CAPN1-220ENST00000530567 A0A1B0GVX0 72 aa11.46□□□□□ -0.57
CAPN1-220ENST00000530567 IGHV6-1A0A0B4J1U7 121 aa11.44□□□□□ -0.58
CAPN1-220ENST00000530567 LINC00313P59037 77 aa11.43□□□□□ -0.58
CAPN1-220ENST00000530567 Q6ZVQ6 151 aa11.43□□□□□ -0.58
CAPN1-220ENST00000530567 MUC2Q02817 5179 aa11.43□□□□□ -0.58
CAPN1-220ENST00000530567 KRTAP16-1A8MUX0 517 aa11.43□□□□□ -0.58
CAPN1-220ENST00000530567 A8MWP4 228 aa11.43□□□□□ -0.58
CAPN1-220ENST00000530567 LINC00846Q9NV44 126 aa11.43□□□□□ -0.58
CAPN1-220ENST00000530567 Q75L30 129 aa11.42□□□□□ -0.58
CAPN1-220ENST00000530567 PCOTHQ58A44 107 aa11.41□□□□□ -0.58
CAPN1-220ENST00000530567 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.58
CAPN1-220ENST00000530567 C20orf166-AS1Q96NR2 134 aa11.4□□□□□ -0.58
CAPN1-220ENST00000530567 KRTAP4-1Q9BYQ7 146 aa11.4□□□□□ -0.58
CAPN1-220ENST00000530567 C8orf87E5RJ46 101 aa11.39□□□□□ -0.59
CAPN1-220ENST00000530567 A8MUU9 505 aa11.38□□□□□ -0.59
CAPN1-220ENST00000530567 NDUFB1O75438 58 aa11.36□□□□□ -0.59
CAPN1-220ENST00000530567 BPY2O14599 106 aa11.35□□□□□ -0.59
CAPN1-220ENST00000530567 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
CAPN1-220ENST00000530567 UBL5Q9BZL1 73 aa11.34□□□□□ -0.59
CAPN1-220ENST00000530567 K7EQZ3 153 aa11.32□□□□□ -0.6
CAPN1-220ENST00000530567 C8orf17Q9NRJ1 99 aa11.31□□□□□ -0.6
CAPN1-220ENST00000530567 MMP24-AS1A0A0U1RRL7 71 aa11.26□□□□□ -0.61
CAPN1-220ENST00000530567 ATP11AUNQ6ZP68 121 aa11.26□□□□□ -0.61
CAPN1-220ENST00000530567 Q8N9L7 120 aa11.26□□□□□ -0.61
CAPN1-220ENST00000530567 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
CAPN1-220ENST00000530567 ACYP1P07311 99 aa11.22□□□□□ -0.61
CAPN1-220ENST00000530567 Q8N9P0 234 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-220ENST00000530567 TMEM254Q8TBM7 123 aa11.17□□□□□ -0.62
CAPN1-220ENST00000530567 CXCL6P80162 114 aa11.16□□□□□ -0.62
CAPN1-220ENST00000530567 hDV103S1A0JD37 113 aa11.15□□□□□ -0.62
CAPN1-220ENST00000530567 MRPL34Q9BQ48 92 aaKnown RBP11.14□□□□□ -0.63
CAPN1-220ENST00000530567 FAT4Q6V0I7 4981 aa11.1□□□□□ -0.63
CAPN1-220ENST00000530567 A0A0U1RQV1 116 aa11.09□□□□□ -0.63
CAPN1-220ENST00000530567 WFDC13Q8IUB5 93 aa11.09□□□□□ -0.63
CAPN1-220ENST00000530567 ZCCHC13Q8WW36 166 aaKnown RBP11.09□□□□□ -0.63
CAPN1-220ENST00000530567 KRTAP19-2Q3LHN2 52 aa11.08□□□□□ -0.64
CAPN1-220ENST00000530567 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
CAPN1-220ENST00000530567 HCG22E2RYF7 251 aa11.05□□□□□ -0.64
CAPN1-220ENST00000530567 ATP5EP2Q5VTU8 51 aa11.04□□□□□ -0.64
CAPN1-220ENST00000530567 J3QR89 54 aa11.01□□□□□ -0.65
CAPN1-220ENST00000530567 LCE2CQ5TA81 110 aa11.01□□□□□ -0.65
CAPN1-220ENST00000530567 LINC00643Q86TS7 51 aa11.01□□□□□ -0.65
CAPN1-220ENST00000530567 NDUFS5O43920 106 aa11□□□□□ -0.65
CAPN1-220ENST00000530567 LCE2AQ5TA79 106 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-220ENST00000530567 Q5W150 140 aa10.92□□□□□ -0.66
CAPN1-220ENST00000530567 HRES1P13985 223 aa10.9□□□□□ -0.66
CAPN1-220ENST00000530567 SPINK7P58062 85 aa10.9□□□□□ -0.66
CAPN1-220ENST00000530567 HIST1H4AP62805 103 aaKnown RBP10.89□□□□□ -0.67
CAPN1-220ENST00000530567 MPLKIPQ8TAP9 179 aa10.86□□□□□ -0.67
CAPN1-220ENST00000530567 A0A087WVE0 104 aa10.84□□□□□ -0.67
CAPN1-220ENST00000530567 K7ERU9 68 aa10.84□□□□□ -0.67
CAPN1-220ENST00000530567 COX6B2Q6YFQ2 88 aa10.83□□□□□ -0.68
CAPN1-220ENST00000530567 MT1HP80294 61 aa10.81□□□□□ -0.68
CAPN1-220ENST00000530567 TP53AIP1Q9HCN2 124 aa10.79□□□□□ -0.68
CAPN1-220ENST00000530567 FLGP20930 4061 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-220ENST00000530567 IGKV2D-30A0A075B6S6 120 aa10.75□□□□□ -0.69
CAPN1-220ENST00000530567 IGKV2-30P06310 120 aa10.75□□□□□ -0.69
CAPN1-220ENST00000530567 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
CAPN1-220ENST00000530567 RBM12B-AS1Q9P1G2 102 aa10.73□□□□□ -0.69
CAPN1-220ENST00000530567 MT-ATP8P03928 68 aa10.68□□□□□ -0.7
CAPN1-220ENST00000530567 FAM236DA0A1B0GTK5 79 aa10.67□□□□□ -0.7
CAPN1-220ENST00000530567 FAM236CP0DP71 79 aa10.67□□□□□ -0.7
CAPN1-220ENST00000530567 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
CAPN1-220ENST00000530567 UQCRQO14949 82 aa10.63□□□□□ -0.71
CAPN1-220ENST00000530567 IMUPQ9GZP8 106 aa10.62□□□□□ -0.71
CAPN1-220ENST00000530567 OCR1Q9BZK8 76 aa10.6□□□□□ -0.71
CAPN1-220ENST00000530567 M0R2T5 61 aa10.56□□□□□ -0.72
CAPN1-220ENST00000530567 H0Y9P7 68 aa10.54□□□□□ -0.72
CAPN1-220ENST00000530567 CYP4F30PQ9H0H9 118 aa10.53□□□□□ -0.72
CAPN1-220ENST00000530567 C4orf26Q17RF5 130 aa10.52□□□□□ -0.73
CAPN1-220ENST00000530567 LOC101927531A0A1B0GV80 90 aa10.51□□□□□ -0.73
CAPN1-220ENST00000530567 KRTAP10-6P60371 365 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-220ENST00000530567 LORP23490 312 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-220ENST00000530567 ATOX1O00244 68 aa10.5□□□□□ -0.73
CAPN1-220ENST00000530567 SCGB1A1P11684 91 aa10.48□□□□□ -0.73
CAPN1-220ENST00000530567 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
CAPN1-220ENST00000530567 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
CAPN1-220ENST00000530567 H1FX-AS1Q4G0G2 97 aa10.44□□□□□ -0.74
CAPN1-220ENST00000530567 KRTAP3-1Q9BYR8 98 aa10.43□□□□□ -0.74
CAPN1-220ENST00000530567 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
CAPN1-220ENST00000530567 C5orf47Q569G3 176 aa10.41□□□□□ -0.74
CAPN1-220ENST00000530567 LINC00208Q96KT6 92 aa10.41□□□□□ -0.74
CAPN1-220ENST00000530567 MP68P56378 58 aa10.4□□□□□ -0.75
CAPN1-220ENST00000530567 H3BPC8 53 aa10.33□□□□□ -0.76
CAPN1-220ENST00000530567 KLKP1Q107X0 134 aa10.33□□□□□ -0.76
CAPN1-220ENST00000530567 TRAV7A0A075B6U4 112 aa10.32□□□□□ -0.76
CAPN1-220ENST00000530567 SMIM20Q8N5G0 67 aa10.32□□□□□ -0.76
CAPN1-220ENST00000530567 KRTAP9-8Q9BYQ0 159 aa10.32□□□□□ -0.76
CAPN1-220ENST00000530567 MT2AP02795 61 aa10.21□□□□□ -0.78
CAPN1-220ENST00000530567 KRTAP9-2Q9BYQ4 174 aa10.19□□□□□ -0.78
CAPN1-220ENST00000530567 S4R3F8 94 aa10.19□□□□□ -0.78
CAPN1-220ENST00000530567 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-220ENST00000530567 LCA10Q71F78 164 aa10.16□□□□□ -0.78
CAPN1-220ENST00000530567 MT1FP04733 61 aa10.15□□□□□ -0.79
CAPN1-220ENST00000530567 SERP2Q8N6R1 65 aa10.15□□□□□ -0.79
CAPN1-220ENST00000530567 A8MUN3 132 aa10.12□□□□□ -0.79
CAPN1-220ENST00000530567 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
CAPN1-220ENST00000530567 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
CAPN1-220ENST00000530567 KRTAP10-10P60014 251 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms