RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TEN1Q86WV5 123 aa4.59□□□□□ -1.67
VPS11-203ENST00000529545 ZNF815PA8K554 130 aa4.58□□□□□ -1.68
VPS11-203ENST00000529545 LITAFQ99732 161 aa4.58□□□□□ -1.68
VPS11-203ENST00000529545 A0A0B4J2C4 111 aa4.57□□□□□ -1.68
VPS11-203ENST00000529545 MT2AP02795 61 aa4.57□□□□□ -1.68
VPS11-203ENST00000529545 MT-ATP8P03928 68 aa4.57□□□□□ -1.68
VPS11-203ENST00000529545 LYRM7Q5U5X0 104 aa4.57□□□□□ -1.68
VPS11-203ENST00000529545 Q6JHZ5 121 aa4.57□□□□□ -1.68
VPS11-203ENST00000529545 Q96NJ1 140 aa4.57□□□□□ -1.68
VPS11-203ENST00000529545 TRBV7-7A0A0K0K1E9 115 aa4.56□□□□□ -1.68
VPS11-203ENST00000529545 FAM236DA0A1B0GTK5 79 aa4.56□□□□□ -1.68
VPS11-203ENST00000529545 FAM236CP0DP71 79 aa4.56□□□□□ -1.68
VPS11-203ENST00000529545 COPS9Q8WXC6 57 aa4.56□□□□□ -1.68
VPS11-203ENST00000529545 PRO1854Q9UHT4 67 aa4.56□□□□□ -1.68
VPS11-203ENST00000529545 PSMB2P49721 201 aa4.55□□□□□ -1.68
VPS11-203ENST00000529545 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
VPS11-203ENST00000529545 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
VPS11-203ENST00000529545 CLEC2BQ92478 149 aa4.54□□□□□ -1.68
VPS11-203ENST00000529545 TRAV13-2A0A0B4J235 113 aa4.53□□□□□ -1.68
VPS11-203ENST00000529545 LST1O00453 97 aa4.53□□□□□ -1.68
VPS11-203ENST00000529545 MT1FP04733 61 aa4.53□□□□□ -1.68
VPS11-203ENST00000529545 IGFL1Q6UW32 110 aa4.53□□□□□ -1.68
VPS11-203ENST00000529545 MUSTN1Q8IVN3 82 aa4.53□□□□□ -1.68
VPS11-203ENST00000529545 SCGB1D4Q6XE38 83 aa4.52□□□□□ -1.69
VPS11-203ENST00000529545 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
VPS11-203ENST00000529545 C20orf166-AS1Q96NR2 134 aa4.52□□□□□ -1.69
VPS11-203ENST00000529545 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
VPS11-203ENST00000529545 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
VPS11-203ENST00000529545 SCGB1C2P0DMR2 95 aa4.51□□□□□ -1.69
VPS11-203ENST00000529545 IFITM1P13164 125 aa4.51□□□□□ -1.69
VPS11-203ENST00000529545 FAM240AA0A1B0GVK7 77 aa4.5□□□□□ -1.69
VPS11-203ENST00000529545 A8MUU9 505 aa4.5□□□□□ -1.69
VPS11-203ENST00000529545 SMIM11BQ8TCY0 68 aa4.5□□□□□ -1.69
VPS11-203ENST00000529545 RBM12B-AS1Q9P1G2 102 aa4.5□□□□□ -1.69
VPS11-203ENST00000529545 SS18L2Q9UHA2 77 aa4.5□□□□□ -1.69
VPS11-203ENST00000529545 C9JAW5 83 aa4.49□□□□□ -1.69
VPS11-203ENST00000529545 H3BT86 120 aa4.49□□□□□ -1.69
VPS11-203ENST00000529545 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
VPS11-203ENST00000529545 Q6ZQY7 126 aa4.49□□□□□ -1.69
VPS11-203ENST00000529545 hADV29S1A0JD25 119 aa4.48□□□□□ -1.69
VPS11-203ENST00000529545 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
VPS11-203ENST00000529545 NDUFV3P56181 108 aaKnown RBP4.48□□□□□ -1.69
VPS11-203ENST00000529545 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
VPS11-203ENST00000529545 LINC00575Q6W349 94 aa4.47□□□□□ -1.69
VPS11-203ENST00000529545 IMUPQ9GZP8 106 aa4.46□□□□□ -1.7
VPS11-203ENST00000529545 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
VPS11-203ENST00000529545 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
VPS11-203ENST00000529545 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
VPS11-203ENST00000529545 ACYP1P07311 99 aa4.44□□□□□ -1.7
VPS11-203ENST00000529545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
VPS11-203ENST00000529545 DSCR10P59022 87 aa4.43□□□□□ -1.7
VPS11-203ENST00000529545 CCDC179H3BU77 68 aa4.42□□□□□ -1.7
VPS11-203ENST00000529545 SNCGO76070 127 aa4.42□□□□□ -1.7
VPS11-203ENST00000529545 TRACP01848 142 aa4.42□□□□□ -1.7
VPS11-203ENST00000529545 COX6CP09669 75 aa4.42□□□□□ -1.7
VPS11-203ENST00000529545 HRES1P13985 223 aa4.41□□□□□ -1.7
VPS11-203ENST00000529545 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
VPS11-203ENST00000529545 A0A087WSZ3 146 aa4.4□□□□□ -1.71
VPS11-203ENST00000529545 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
VPS11-203ENST00000529545 LINC00313P59037 77 aa4.4□□□□□ -1.71
VPS11-203ENST00000529545 LINC00643Q86TS7 51 aa4.4□□□□□ -1.71
VPS11-203ENST00000529545 HIST1H4AP62805 103 aaKnown RBP4.39□□□□□ -1.71
VPS11-203ENST00000529545 BAALC-AS2P0C853 105 aa4.37□□□□□ -1.71
VPS11-203ENST00000529545 NOTCH2NLQ7Z3S9 236 aa4.37□□□□□ -1.71
VPS11-203ENST00000529545 A8MWP4 228 aa4.36□□□□□ -1.71
VPS11-203ENST00000529545 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
VPS11-203ENST00000529545 FAM218AQ96MZ4 157 aa4.35□□□□□ -1.71
VPS11-203ENST00000529545 UQCRQO14949 82 aa4.34□□□□□ -1.71
VPS11-203ENST00000529545 IGKV4-1P06312 121 aa4.34□□□□□ -1.71
VPS11-203ENST00000529545 H0YGX0 51 aa4.33□□□□□ -1.72
VPS11-203ENST00000529545 A0A1B0GX51 115 aa4.32□□□□□ -1.72
VPS11-203ENST00000529545 COX7CP15954 63 aa4.31□□□□□ -1.72
VPS11-203ENST00000529545 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
VPS11-203ENST00000529545 IGHV6-1A0A0B4J1U7 121 aa4.3□□□□□ -1.72
VPS11-203ENST00000529545 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
VPS11-203ENST00000529545 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
VPS11-203ENST00000529545 SPINK7P58062 85 aa4.29□□□□□ -1.72
VPS11-203ENST00000529545 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
VPS11-203ENST00000529545 NEBP20929 6669 aa4.28□□□□□ -1.72
VPS11-203ENST00000529545 ATOX1O00244 68 aa4.27□□□□□ -1.73
VPS11-203ENST00000529545 CCKP06307 115 aa4.27□□□□□ -1.73
VPS11-203ENST00000529545 DEFB116Q30KQ4 102 aa4.27□□□□□ -1.73
VPS11-203ENST00000529545 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
VPS11-203ENST00000529545 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
VPS11-203ENST00000529545 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
VPS11-203ENST00000529545 TRBV7-4A0A0J9YYF1 115 aa4.26□□□□□ -1.73
VPS11-203ENST00000529545 C8orf87E5RJ46 101 aa4.26□□□□□ -1.73
VPS11-203ENST00000529545 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
VPS11-203ENST00000529545 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
VPS11-203ENST00000529545 LINC00472Q9H8W2 130 aa4.25□□□□□ -1.73
VPS11-203ENST00000529545 JMJD7-PLA2G4BH0Y9G9 81 aa4.23□□□□□ -1.73
VPS11-203ENST00000529545 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
VPS11-203ENST00000529545 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
VPS11-203ENST00000529545 TMEM258P61165 79 aa4.22□□□□□ -1.73
VPS11-203ENST00000529545 ATP5EP2Q5VTU8 51 aa4.22□□□□□ -1.73
VPS11-203ENST00000529545 C14orf132Q9NPU4 83 aa4.22□□□□□ -1.73
VPS11-203ENST00000529545 LOC110117498A0A087WWA1 95 aa4.21□□□□□ -1.74
VPS11-203ENST00000529545 J3KT08 172 aa4.21□□□□□ -1.74
VPS11-203ENST00000529545 TMEM256-PLSCR3K7ERE1 68 aa4.21□□□□□ -1.74
VPS11-203ENST00000529545 ORMDL1Q9P0S3 153 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms