RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 GHRHP01286 108 aa6.61□□□□□ -1.35
HIF3A-212ENST00000529205 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
HIF3A-212ENST00000529205 A0A1W2PPM0 123 aa6.6□□□□□ -1.35
HIF3A-212ENST00000529205 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
HIF3A-212ENST00000529205 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
HIF3A-212ENST00000529205 TRACP01848 142 aa6.59□□□□□ -1.35
HIF3A-212ENST00000529205 IGKV4-1P06312 121 aa6.59□□□□□ -1.35
HIF3A-212ENST00000529205 COX6CP09669 75 aa6.59□□□□□ -1.35
HIF3A-212ENST00000529205 H3BMG7 143 aa6.58□□□□□ -1.36
HIF3A-212ENST00000529205 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
HIF3A-212ENST00000529205 A8MWP4 228 aa6.57□□□□□ -1.36
HIF3A-212ENST00000529205 FABP2P12104 132 aa6.54□□□□□ -1.36
HIF3A-212ENST00000529205 ATXN8Q156A1 80 aa6.54□□□□□ -1.36
HIF3A-212ENST00000529205 ORMDL1Q9P0S3 153 aa6.54□□□□□ -1.36
HIF3A-212ENST00000529205 BAALC-AS2P0C853 105 aa6.53□□□□□ -1.36
HIF3A-212ENST00000529205 IGHV6-1A0A0B4J1U7 121 aa6.52□□□□□ -1.37
HIF3A-212ENST00000529205 A0A1B0GV72 72 aa6.52□□□□□ -1.37
HIF3A-212ENST00000529205 SMCPP49901 116 aaPredicted RBP6.52□□□□□ -1.37
HIF3A-212ENST00000529205 A0A1W2PNM2 257 aa6.51□□□□□ -1.37
HIF3A-212ENST00000529205 DNAL4O96015 105 aa6.51□□□□□ -1.37
HIF3A-212ENST00000529205 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
HIF3A-212ENST00000529205 SPCS1Q9Y6A9 102 aa6.51□□□□□ -1.37
HIF3A-212ENST00000529205 TRBV7-4A0A0J9YYF1 115 aa6.5□□□□□ -1.37
HIF3A-212ENST00000529205 C9JAW5 83 aa6.5□□□□□ -1.37
HIF3A-212ENST00000529205 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
HIF3A-212ENST00000529205 K7EP34 96 aa6.49□□□□□ -1.37
HIF3A-212ENST00000529205 TMEM256-PLSCR3K7ERE1 68 aa6.49□□□□□ -1.37
HIF3A-212ENST00000529205 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
HIF3A-212ENST00000529205 SPINK7P58062 85 aa6.48□□□□□ -1.37
HIF3A-212ENST00000529205 DEFB116Q30KQ4 102 aa6.48□□□□□ -1.37
HIF3A-212ENST00000529205 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
HIF3A-212ENST00000529205 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
HIF3A-212ENST00000529205 LYRM7Q5U5X0 104 aa6.47□□□□□ -1.37
HIF3A-212ENST00000529205 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.38
HIF3A-212ENST00000529205 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
HIF3A-212ENST00000529205 H3BQ85 93 aa6.43□□□□□ -1.38
HIF3A-212ENST00000529205 A0A1B0GV90 55 aa6.42□□□□□ -1.38
HIF3A-212ENST00000529205 H3BT86 120 aa6.42□□□□□ -1.38
HIF3A-212ENST00000529205 A0A1B0GVX0 72 aa6.41□□□□□ -1.38
HIF3A-212ENST00000529205 CCKP06307 115 aa6.41□□□□□ -1.38
HIF3A-212ENST00000529205 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
HIF3A-212ENST00000529205 RBM3P98179 157 aaKnown RBP6.4□□□□□ -1.38
HIF3A-212ENST00000529205 Q6ZQT0 140 aa6.4□□□□□ -1.38
HIF3A-212ENST00000529205 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.38
HIF3A-212ENST00000529205 LOC110117498A0A087WWA1 95 aa6.38□□□□□ -1.39
HIF3A-212ENST00000529205 JMJD7-PLA2G4BH0Y9G9 81 aa6.35□□□□□ -1.39
HIF3A-212ENST00000529205 J3KT08 172 aa6.35□□□□□ -1.39
HIF3A-212ENST00000529205 VPS25Q9BRG1 176 aa6.35□□□□□ -1.39
HIF3A-212ENST00000529205 NEBP20929 6669 aa6.35□□□□□ -1.39
HIF3A-212ENST00000529205 NDUFB1O75438 58 aa6.34□□□□□ -1.39
HIF3A-212ENST00000529205 GTF2H5Q6ZYL4 71 aa6.34□□□□□ -1.39
HIF3A-212ENST00000529205 DSCR8Q96T75 97 aa6.34□□□□□ -1.39
HIF3A-212ENST00000529205 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
HIF3A-212ENST00000529205 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
HIF3A-212ENST00000529205 F8W1H4 67 aa6.31□□□□□ -1.4
HIF3A-212ENST00000529205 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
HIF3A-212ENST00000529205 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
HIF3A-212ENST00000529205 A6NN06 94 aa6.29□□□□□ -1.4
HIF3A-212ENST00000529205 IGKV3D-7A0A0C4DH55 119 aa6.26□□□□□ -1.41
HIF3A-212ENST00000529205 PDE6GP18545 87 aa6.26□□□□□ -1.41
HIF3A-212ENST00000529205 C8orf17Q9NRJ1 99 aa6.24□□□□□ -1.41
HIF3A-212ENST00000529205 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
HIF3A-212ENST00000529205 A0A1B0GW54 56 aa6.21□□□□□ -1.42
HIF3A-212ENST00000529205 Q6ZVQ6 151 aa6.21□□□□□ -1.42
HIF3A-212ENST00000529205 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
HIF3A-212ENST00000529205 FAM236BA0A1B0GV22 79 aa6.18□□□□□ -1.42
HIF3A-212ENST00000529205 Q5VV11 94 aa6.17□□□□□ -1.42
HIF3A-212ENST00000529205 NREPQ16612 68 aa6.16□□□□□ -1.42
HIF3A-212ENST00000529205 NDUFS5O43920 106 aa6.14□□□□□ -1.43
HIF3A-212ENST00000529205 MRPL34Q9BQ48 92 aaKnown RBP6.14□□□□□ -1.43
HIF3A-212ENST00000529205 Q8N9L7 120 aa6.13□□□□□ -1.43
HIF3A-212ENST00000529205 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
HIF3A-212ENST00000529205 K7EQZ3 153 aa6.12□□□□□ -1.43
HIF3A-212ENST00000529205 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
HIF3A-212ENST00000529205 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
HIF3A-212ENST00000529205 TMEM254Q8TBM7 123 aa6.12□□□□□ -1.43
HIF3A-212ENST00000529205 MT1BP07438 61 aa6.11□□□□□ -1.43
HIF3A-212ENST00000529205 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
HIF3A-212ENST00000529205 BPY2O14599 106 aa6.1□□□□□ -1.43
HIF3A-212ENST00000529205 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
HIF3A-212ENST00000529205 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
HIF3A-212ENST00000529205 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
HIF3A-212ENST00000529205 C5orf47Q569G3 176 aa6.08□□□□□ -1.44
HIF3A-212ENST00000529205 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
HIF3A-212ENST00000529205 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
HIF3A-212ENST00000529205 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
HIF3A-212ENST00000529205 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
HIF3A-212ENST00000529205 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
HIF3A-212ENST00000529205 UBL5Q9BZL1 73 aa6.06□□□□□ -1.44
HIF3A-212ENST00000529205 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
HIF3A-212ENST00000529205 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
HIF3A-212ENST00000529205 ACYP1P07311 99 aa6.03□□□□□ -1.44
HIF3A-212ENST00000529205 C4orf26Q17RF5 130 aa6.03□□□□□ -1.44
HIF3A-212ENST00000529205 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
HIF3A-212ENST00000529205 CXCL6P80162 114 aa6□□□□□ -1.45
HIF3A-212ENST00000529205 S4R3F8 94 aa5.99□□□□□ -1.45
HIF3A-212ENST00000529205 Q5W150 140 aa5.98□□□□□ -1.45
HIF3A-212ENST00000529205 KMT2DO14686 5537 aa5.98□□□□□ -1.45
HIF3A-212ENST00000529205 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
HIF3A-212ENST00000529205 KLKP1Q107X0 134 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms