RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	ASB16-AS1	Q495Z4	193 aa		4.33	□□□□□ -1.72
MS4A6A-208	ENST00000528851	ATXN8	Q156A1	80 aa		4.32	□□□□□ -1.72
MS4A6A-208	ENST00000528851	KRTAP13-3	Q3SY46	172 aa		4.32	□□□□□ -1.72
MS4A6A-208	ENST00000528851	C1orf195	Q5TG92	126 aa		4.32	□□□□□ -1.72
MS4A6A-208	ENST00000528851	BAALC-AS2	P0C853	105 aa		4.31	□□□□□ -1.72
MS4A6A-208	ENST00000528851	ANKRD29	Q8N6D5	301 aa		4.31	□□□□□ -1.72
MS4A6A-208	ENST00000528851	LRP2	P98164	4655 aa		4.31	□□□□□ -1.72
MS4A6A-208	ENST00000528851	FAM240A	A0A1B0GVK7	77 aa		4.3	□□□□□ -1.72
MS4A6A-208	ENST00000528851		H3BT86	120 aa		4.3	□□□□□ -1.72
MS4A6A-208	ENST00000528851	LPA	P08519	4548 aa		4.3	□□□□□ -1.72
MS4A6A-208	ENST00000528851	MT-ATP8	P03928	68 aa		4.3	□□□□□ -1.72
MS4A6A-208	ENST00000528851	SS18L2	Q9UHA2	77 aa		4.3	□□□□□ -1.72
MS4A6A-208	ENST00000528851	TRBV7-4	A0A0J9YYF1	115 aa		4.29	□□□□□ -1.72
MS4A6A-208	ENST00000528851		C9JAW5	83 aa		4.29	□□□□□ -1.72
MS4A6A-208	ENST00000528851	RBM3	P98179	157 aa	Known RBP	4.29	□□□□□ -1.72
MS4A6A-208	ENST00000528851	UBR4	Q5T4S7	5183 aa		4.27	□□□□□ -1.73
MS4A6A-208	ENST00000528851		A0A1W2PNM2	257 aa		4.27	□□□□□ -1.73
MS4A6A-208	ENST00000528851	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.27	□□□□□ -1.73
MS4A6A-208	ENST00000528851	DSCR8	Q96T75	97 aa		4.27	□□□□□ -1.73
MS4A6A-208	ENST00000528851		A0A087WSZ3	146 aa		4.26	□□□□□ -1.73
MS4A6A-208	ENST00000528851	ACYP1	P07311	99 aa		4.25	□□□□□ -1.73
MS4A6A-208	ENST00000528851	SEC61B	P60468	96 aa	Known RBP	4.25	□□□□□ -1.73
MS4A6A-208	ENST00000528851	ANAPC13	Q9BS18	74 aa		4.25	□□□□□ -1.73
MS4A6A-208	ENST00000528851	CCK	P06307	115 aa		4.25	□□□□□ -1.73
MS4A6A-208	ENST00000528851	PDE6G	P18545	87 aa		4.25	□□□□□ -1.73
MS4A6A-208	ENST00000528851	IMUP	Q9GZP8	106 aa		4.24	□□□□□ -1.73
MS4A6A-208	ENST00000528851		A0A1B0GW54	56 aa		4.23	□□□□□ -1.73
MS4A6A-208	ENST00000528851	C9orf92	A6NGG3	77 aa		4.23	□□□□□ -1.73
MS4A6A-208	ENST00000528851	LOC110117498	A0A087WWA1	95 aa		4.22	□□□□□ -1.73
MS4A6A-208	ENST00000528851	OBSCN-AS1	Q96MR7	158 aa		4.22	□□□□□ -1.73
MS4A6A-208	ENST00000528851		Q96NJ1	140 aa		4.21	□□□□□ -1.74
MS4A6A-208	ENST00000528851	MUC17	Q685J3	4493 aa		4.21	□□□□□ -1.74
MS4A6A-208	ENST00000528851	LINC00472	Q9H8W2	130 aa		4.21	□□□□□ -1.74
MS4A6A-208	ENST00000528851		Q6ZQT0	140 aa		4.2	□□□□□ -1.74
MS4A6A-208	ENST00000528851	LINC00643	Q86TS7	51 aa		4.19	□□□□□ -1.74
MS4A6A-208	ENST00000528851		A0A0U1RQV1	116 aa		4.18	□□□□□ -1.74
MS4A6A-208	ENST00000528851	IGKV4-1	P06312	121 aa		4.18	□□□□□ -1.74
MS4A6A-208	ENST00000528851	RPL37	P61927	97 aa	Known RBP	4.18	□□□□□ -1.74
MS4A6A-208	ENST00000528851	C14orf132	Q9NPU4	83 aa		4.18	□□□□□ -1.74
MS4A6A-208	ENST00000528851	RNF213	Q63HN8	5207 aa		4.18	□□□□□ -1.74
MS4A6A-208	ENST00000528851		J3KT08	172 aa		4.17	□□□□□ -1.74
MS4A6A-208	ENST00000528851	LINC00313	P59037	77 aa		4.16	□□□□□ -1.74
MS4A6A-208	ENST00000528851	PCOTH	Q58A44	107 aa		4.16	□□□□□ -1.74
MS4A6A-208	ENST00000528851	CCDC179	H3BU77	68 aa		4.15	□□□□□ -1.75
MS4A6A-208	ENST00000528851	DEFB116	Q30KQ4	102 aa		4.15	□□□□□ -1.75
MS4A6A-208	ENST00000528851		Q75L30	129 aa		4.15	□□□□□ -1.75
MS4A6A-208	ENST00000528851	NREP	Q16612	68 aa		4.14	□□□□□ -1.75
MS4A6A-208	ENST00000528851	C8orf87	E5RJ46	101 aa		4.14	□□□□□ -1.75
MS4A6A-208	ENST00000528851	ATP11AUN	Q6ZP68	121 aa		4.14	□□□□□ -1.75
MS4A6A-208	ENST00000528851	C20orf166-AS1	Q96NR2	134 aa		4.14	□□□□□ -1.75
MS4A6A-208	ENST00000528851	KRTAP4-1	Q9BYQ7	146 aa		4.14	□□□□□ -1.75
MS4A6A-208	ENST00000528851		A8MUU9	505 aa		4.13	□□□□□ -1.75
MS4A6A-208	ENST00000528851	UQCRQ	O14949	82 aa		4.13	□□□□□ -1.75
MS4A6A-208	ENST00000528851	NDUFB1	O75438	58 aa		4.13	□□□□□ -1.75
MS4A6A-208	ENST00000528851	DSCR10	P59022	87 aa		4.13	□□□□□ -1.75
MS4A6A-208	ENST00000528851	HIST1H4A	P62805	103 aa	Known RBP	4.13	□□□□□ -1.75
MS4A6A-208	ENST00000528851	FAM236A	A0A1B0GUQ0	79 aa		4.12	□□□□□ -1.75
MS4A6A-208	ENST00000528851	FAM236B	A0A1B0GV22	79 aa		4.12	□□□□□ -1.75
MS4A6A-208	ENST00000528851		A0A1B0GVX0	72 aa		4.12	□□□□□ -1.75
MS4A6A-208	ENST00000528851	IGHV6-1	A0A0B4J1U7	121 aa		4.11	□□□□□ -1.75
MS4A6A-208	ENST00000528851	ATOX1	O00244	68 aa		4.11	□□□□□ -1.75
MS4A6A-208	ENST00000528851	MUC2	Q02817	5179 aa		4.1	□□□□□ -1.75
MS4A6A-208	ENST00000528851	KRTAP16-1	A8MUX0	517 aa		4.1	□□□□□ -1.75
MS4A6A-208	ENST00000528851		A8MWP4	228 aa		4.1	□□□□□ -1.75
MS4A6A-208	ENST00000528851	COX7C	P15954	63 aa		4.09	□□□□□ -1.75
MS4A6A-208	ENST00000528851	ATP5EP2	Q5VTU8	51 aa		4.09	□□□□□ -1.75
MS4A6A-208	ENST00000528851	NOTCH2NL	Q7Z3S9	236 aa		4.09	□□□□□ -1.75
MS4A6A-208	ENST00000528851	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.09	□□□□□ -1.76
MS4A6A-208	ENST00000528851	IGKV3D-7	A0A0C4DH55	119 aa		4.07	□□□□□ -1.76
MS4A6A-208	ENST00000528851	PRR15	Q8IV56	129 aa		4.07	□□□□□ -1.76
MS4A6A-208	ENST00000528851	RPS28	P62857	69 aa	Known RBP	4.07	□□□□□ -1.76
MS4A6A-208	ENST00000528851	SMIM20	Q8N5G0	67 aa		4.07	□□□□□ -1.76
MS4A6A-208	ENST00000528851	BPY2	O14599	106 aa		4.06	□□□□□ -1.76
MS4A6A-208	ENST00000528851		Q6ZVQ6	151 aa		4.06	□□□□□ -1.76
MS4A6A-208	ENST00000528851	C8orf17	Q9NRJ1	99 aa		4.06	□□□□□ -1.76
MS4A6A-208	ENST00000528851	SERP2	Q8N6R1	65 aa		4.05	□□□□□ -1.76
MS4A6A-208	ENST00000528851		Q8N9P0	234 aa	Predicted RBP	4.05	□□□□□ -1.76
MS4A6A-208	ENST00000528851	UBL5	Q9BZL1	73 aa		4.05	□□□□□ -1.76
MS4A6A-208	ENST00000528851	LINC00846	Q9NV44	126 aa		4.05	□□□□□ -1.76
MS4A6A-208	ENST00000528851	TMEM258	P61165	79 aa		4.04	□□□□□ -1.76
MS4A6A-208	ENST00000528851	TMEM254	Q8TBM7	123 aa		4.02	□□□□□ -1.77
MS4A6A-208	ENST00000528851	FAT4	Q6V0I7	4981 aa		4.02	□□□□□ -1.77
MS4A6A-208	ENST00000528851		K7EQZ3	153 aa		4.02	□□□□□ -1.77
MS4A6A-208	ENST00000528851	KRTAP19-2	Q3LHN2	52 aa		4.02	□□□□□ -1.77
MS4A6A-208	ENST00000528851	MRPL34	Q9BQ48	92 aa	Known RBP	4.02	□□□□□ -1.77
MS4A6A-208	ENST00000528851	MMP24-AS1	A0A0U1RRL7	71 aa		4.01	□□□□□ -1.77
MS4A6A-208	ENST00000528851	KRTAP15-1	Q3LI76	137 aa		4.01	□□□□□ -1.77
MS4A6A-208	ENST00000528851	ZCCHC13	Q8WW36	166 aa	Known RBP	4.01	□□□□□ -1.77
MS4A6A-208	ENST00000528851	hDV103S1	A0JD37	113 aa		4	□□□□□ -1.77
MS4A6A-208	ENST00000528851	COX6B2	Q6YFQ2	88 aa		3.98	□□□□□ -1.77
MS4A6A-208	ENST00000528851	CXCL6	P80162	114 aa		3.98	□□□□□ -1.77
MS4A6A-208	ENST00000528851		A0A087WVE0	104 aa		3.97	□□□□□ -1.77
MS4A6A-208	ENST00000528851	CASC2	Q6XLA1	102 aa		3.97	□□□□□ -1.77
MS4A6A-208	ENST00000528851	TRAV7	A0A075B6U4	112 aa		3.96	□□□□□ -1.78
MS4A6A-208	ENST00000528851		Q8N9L7	120 aa		3.96	□□□□□ -1.78
MS4A6A-208	ENST00000528851	NDUFS5	O43920	106 aa		3.95	□□□□□ -1.78
MS4A6A-208	ENST00000528851	SPINK7	P58062	85 aa		3.95	□□□□□ -1.78
MS4A6A-208	ENST00000528851	MT1H	P80294	61 aa		3.95	□□□□□ -1.78
MS4A6A-208	ENST00000528851	HRES1	P13985	223 aa		3.95	□□□□□ -1.78
MS4A6A-208	ENST00000528851	KLKP1	Q107X0	134 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms