RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 SPINK6Q6UWN8 80 aa11.16□□□□□ -0.62
TM9SF1-206ENST00000528669 ALMS1Q8TCU4 4167 aa11.16□□□□□ -0.62
TM9SF1-206ENST00000528669 MRPL34Q9BQ48 92 aaKnown RBP11.16□□□□□ -0.62
TM9SF1-206ENST00000528669 DNAH11Q96DT5 4516 aa11.14□□□□□ -0.63
TM9SF1-206ENST00000528669 IGLV7-43P04211 117 aa11.14□□□□□ -0.63
TM9SF1-206ENST00000528669 COA5Q86WW8 74 aa11.14□□□□□ -0.63
TM9SF1-206ENST00000528669 CIRBP-AS1Q8TBR5 109 aa11.13□□□□□ -0.63
TM9SF1-206ENST00000528669 V9GYY9 64 aa11.13□□□□□ -0.63
TM9SF1-206ENST00000528669 Q8N9P0 234 aaPredicted RBP11.13□□□□□ -0.63
TM9SF1-206ENST00000528669 DNAH5Q8TE73 4624 aa11.11□□□□□ -0.63
TM9SF1-206ENST00000528669 LY6G6CO95867 125 aa11.1□□□□□ -0.63
TM9SF1-206ENST00000528669 Q5VV11 94 aa11.09□□□□□ -0.63
TM9SF1-206ENST00000528669 DNHD1Q96M86 4753 aa11.07□□□□□ -0.64
TM9SF1-206ENST00000528669 PRR15LQ9BU68 103 aa11.05□□□□□ -0.64
TM9SF1-206ENST00000528669 LIMD2Q9BT23 127 aa11.04□□□□□ -0.64
TM9SF1-206ENST00000528669 KRTAP10-2P60368 255 aa11.03□□□□□ -0.64
TM9SF1-206ENST00000528669 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
TM9SF1-206ENST00000528669 KRTAP21-3Q3LHN1 58 aa11.02□□□□□ -0.65
TM9SF1-206ENST00000528669 Q5W150 140 aa11.02□□□□□ -0.65
TM9SF1-206ENST00000528669 A8MU10 97 aa11.01□□□□□ -0.65
TM9SF1-206ENST00000528669 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
TM9SF1-206ENST00000528669 SEC61GP60059 68 aa11□□□□□ -0.65
TM9SF1-206ENST00000528669 SSBP3-AS1Q7Z2R9 100 aa10.97□□□□□ -0.65
TM9SF1-206ENST00000528669 HRES1P13985 223 aa10.96□□□□□ -0.66
TM9SF1-206ENST00000528669 LRP1BQ9NZR2 4599 aa10.95□□□□□ -0.66
TM9SF1-206ENST00000528669 SPAG11AQ6PDA7 123 aa10.95□□□□□ -0.66
TM9SF1-206ENST00000528669 KRTAP13-3Q3SY46 172 aa10.94□□□□□ -0.66
TM9SF1-206ENST00000528669 LOC101927531A0A1B0GV80 90 aa10.94□□□□□ -0.66
TM9SF1-206ENST00000528669 KRTAP13-2Q52LG2 175 aa10.9□□□□□ -0.66
TM9SF1-206ENST00000528669 HYDINQ4G0P3 5121 aa10.9□□□□□ -0.66
TM9SF1-206ENST00000528669 PKD1P98161 4303 aa10.89□□□□□ -0.67
TM9SF1-206ENST00000528669 C8orf87E5RJ46 101 aa10.88□□□□□ -0.67
TM9SF1-206ENST00000528669 Q75L30 129 aa10.88□□□□□ -0.67
TM9SF1-206ENST00000528669 KRTAP10-1P60331 282 aa10.88□□□□□ -0.67
TM9SF1-206ENST00000528669 RETNLBQ9BQ08 111 aa10.88□□□□□ -0.67
TM9SF1-206ENST00000528669 LINC00313P59037 77 aa10.87□□□□□ -0.67
TM9SF1-206ENST00000528669 FAT2Q9NYQ8 4349 aa10.86□□□□□ -0.67
TM9SF1-206ENST00000528669 A6NED7 52 aa10.85□□□□□ -0.67
TM9SF1-206ENST00000528669 LINC01558Q9Y6Z2 57 aa10.85□□□□□ -0.67
TM9SF1-206ENST00000528669 LCA10Q71F78 164 aa10.82□□□□□ -0.68
TM9SF1-206ENST00000528669 Q6ZSA8 131 aa10.82□□□□□ -0.68
TM9SF1-206ENST00000528669 PRR26Q8N8Z3 221 aa10.82□□□□□ -0.68
TM9SF1-206ENST00000528669 VPS13BQ7Z7G8 4022 aa10.81□□□□□ -0.68
TM9SF1-206ENST00000528669 SPTSSBQ8NFR3 76 aa10.77□□□□□ -0.69
TM9SF1-206ENST00000528669 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
TM9SF1-206ENST00000528669 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
TM9SF1-206ENST00000528669 PMAIP1Q13794 54 aa10.76□□□□□ -0.69
TM9SF1-206ENST00000528669 ACYP2P14621 99 aa10.74□□□□□ -0.69
TM9SF1-206ENST00000528669 KRTAP16-1A8MUX0 517 aa10.72□□□□□ -0.69
TM9SF1-206ENST00000528669 SPINK7P58062 85 aa10.71□□□□□ -0.69
TM9SF1-206ENST00000528669 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
TM9SF1-206ENST00000528669 DMAC1Q96GE9 116 aa10.69□□□□□ -0.7
TM9SF1-206ENST00000528669 CDC42SE1Q9NRR8 79 aa10.69□□□□□ -0.7
TM9SF1-206ENST00000528669 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
TM9SF1-206ENST00000528669 ATP11AUNQ6ZP68 121 aa10.66□□□□□ -0.7
TM9SF1-206ENST00000528669 C4orf48Q5BLP8 95 aa10.64□□□□□ -0.71
TM9SF1-206ENST00000528669 TYMSOSQ8TAI1 123 aa10.63□□□□□ -0.71
TM9SF1-206ENST00000528669 IGKV2D-30A0A075B6S6 120 aa10.63□□□□□ -0.71
TM9SF1-206ENST00000528669 PKHD1P08F94 4074 aa10.62□□□□□ -0.71
TM9SF1-206ENST00000528669 SPINK1P00995 79 aa10.55□□□□□ -0.72
TM9SF1-206ENST00000528669 A6NN06 94 aa10.54□□□□□ -0.72
TM9SF1-206ENST00000528669 SACSQ9NZJ4 4579 aa10.51□□□□□ -0.73
TM9SF1-206ENST00000528669 C7orf65Q6ZTY9 151 aa10.49□□□□□ -0.73
TM9SF1-206ENST00000528669 A0A1B0GU69 56 aa10.49□□□□□ -0.73
TM9SF1-206ENST00000528669 KTN1-AS1Q86SY8 53 aa10.49□□□□□ -0.73
TM9SF1-206ENST00000528669 LINC00304Q8N9R0 145 aa10.47□□□□□ -0.73
TM9SF1-206ENST00000528669 SMR3BP02814 79 aaPredicted RBP10.45□□□□□ -0.74
TM9SF1-206ENST00000528669 DYNC1H1Q14204 4646 aaKnown RBP10.45□□□□□ -0.74
TM9SF1-206ENST00000528669 FAT1Q14517 4588 aa10.41□□□□□ -0.74
TM9SF1-206ENST00000528669 Q8N1X5 172 aa10.38□□□□□ -0.75
TM9SF1-206ENST00000528669 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
TM9SF1-206ENST00000528669 RPS29P62273 56 aaKnown RBP10.34□□□□□ -0.75
TM9SF1-206ENST00000528669 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
TM9SF1-206ENST00000528669 APOBP04114 4563 aaKnown RBP10.32□□□□□ -0.76
TM9SF1-206ENST00000528669 SPATA8Q6RVD6 105 aa10.29□□□□□ -0.76
TM9SF1-206ENST00000528669 UQCR11O14957 56 aa10.27□□□□□ -0.76
TM9SF1-206ENST00000528669 MIR22HGQ0VDD5 57 aa10.27□□□□□ -0.76
TM9SF1-206ENST00000528669 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
TM9SF1-206ENST00000528669 KRTAP10-4P60372 401 aaPredicted RBP10.23□□□□□ -0.77
TM9SF1-206ENST00000528669 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
TM9SF1-206ENST00000528669 A8MUU9 505 aa10.21□□□□□ -0.77
TM9SF1-206ENST00000528669 C20orf166-AS1Q96NR2 134 aa10.21□□□□□ -0.78
TM9SF1-206ENST00000528669 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
TM9SF1-206ENST00000528669 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
TM9SF1-206ENST00000528669 KRTAP3-1Q9BYR8 98 aa10.13□□□□□ -0.79
TM9SF1-206ENST00000528669 RYR2Q92736 4967 aa10.09□□□□□ -0.79
TM9SF1-206ENST00000528669 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
TM9SF1-206ENST00000528669 KMT2CQ8NEZ4 4911 aaKnown RBP10.02□□□□□ -0.81
TM9SF1-206ENST00000528669 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
TM9SF1-206ENST00000528669 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
TM9SF1-206ENST00000528669 TNXBP22105 4242 aa9.97□□□□□ -0.81
TM9SF1-206ENST00000528669 H0YAA0 97 aa9.96□□□□□ -0.81
TM9SF1-206ENST00000528669 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
TM9SF1-206ENST00000528669 A0A1B0GU33 70 aa9.91□□□□□ -0.82
TM9SF1-206ENST00000528669 HSPG2P98160 4391 aa9.89□□□□□ -0.83
TM9SF1-206ENST00000528669 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
TM9SF1-206ENST00000528669 MYCBP2O75592 4640 aa9.82□□□□□ -0.84
TM9SF1-206ENST00000528669 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
TM9SF1-206ENST00000528669 CSAG1Q6PB30 78 aa9.81□□□□□ -0.84
TM9SF1-206ENST00000528669 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 463.5 ms