RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 C21orf62-AS1Q17RA5 79 aa5.33□□□□□ -1.56
CPSF1-203ENST00000527916 A0A1B0GV72 72 aa5.32□□□□□ -1.56
CPSF1-203ENST00000527916 SMIM6P0DI80 62 aa5.32□□□□□ -1.56
CPSF1-203ENST00000527916 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
CPSF1-203ENST00000527916 DEFB116Q30KQ4 102 aa5.31□□□□□ -1.56
CPSF1-203ENST00000527916 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
CPSF1-203ENST00000527916 DSCR8Q96T75 97 aa5.31□□□□□ -1.56
CPSF1-203ENST00000527916 PCP4L1A6NKN8 68 aa5.3□□□□□ -1.56
CPSF1-203ENST00000527916 C8orf87E5RJ46 101 aa5.3□□□□□ -1.56
CPSF1-203ENST00000527916 BAALC-AS2P0C853 105 aa5.3□□□□□ -1.56
CPSF1-203ENST00000527916 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
CPSF1-203ENST00000527916 MT1FP04733 61 aa5.29□□□□□ -1.56
CPSF1-203ENST00000527916 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
CPSF1-203ENST00000527916 IGHV6-1A0A0B4J1U7 121 aa5.28□□□□□ -1.56
CPSF1-203ENST00000527916 A0A1B0GVX0 72 aa5.28□□□□□ -1.56
CPSF1-203ENST00000527916 C9JAW5 83 aa5.28□□□□□ -1.56
CPSF1-203ENST00000527916 J3KT08 172 aa5.28□□□□□ -1.56
CPSF1-203ENST00000527916 A0A1B0GW54 56 aa5.27□□□□□ -1.57
CPSF1-203ENST00000527916 Q6ZQT0 140 aa5.27□□□□□ -1.57
CPSF1-203ENST00000527916 MPLKIPQ8TAP9 179 aa5.27□□□□□ -1.57
CPSF1-203ENST00000527916 VPS25Q9BRG1 176 aa5.27□□□□□ -1.57
CPSF1-203ENST00000527916 JMJD7-PLA2G4BH0Y9G9 81 aa5.26□□□□□ -1.57
CPSF1-203ENST00000527916 M0R143 59 aa5.26□□□□□ -1.57
CPSF1-203ENST00000527916 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
CPSF1-203ENST00000527916 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
CPSF1-203ENST00000527916 FAM236DA0A1B0GTK5 79 aa5.25□□□□□ -1.57
CPSF1-203ENST00000527916 FAM236CP0DP71 79 aa5.25□□□□□ -1.57
CPSF1-203ENST00000527916 HRES1P13985 223 aa5.25□□□□□ -1.57
CPSF1-203ENST00000527916 ATXN8Q156A1 80 aa5.25□□□□□ -1.57
CPSF1-203ENST00000527916 PDE6GP18545 87 aa5.23□□□□□ -1.57
CPSF1-203ENST00000527916 LOC110117498A0A087WWA1 95 aa5.22□□□□□ -1.57
CPSF1-203ENST00000527916 NDUFB1O75438 58 aa5.22□□□□□ -1.57
CPSF1-203ENST00000527916 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
CPSF1-203ENST00000527916 ZCCHC13Q8WW36 166 aaKnown RBP5.21□□□□□ -1.58
CPSF1-203ENST00000527916 NEBP20929 6669 aa5.2□□□□□ -1.58
CPSF1-203ENST00000527916 A8MWP4 228 aa5.19□□□□□ -1.58
CPSF1-203ENST00000527916 LYRM7Q5U5X0 104 aa5.19□□□□□ -1.58
CPSF1-203ENST00000527916 MTURNQ8N3F0 131 aa5.19□□□□□ -1.58
CPSF1-203ENST00000527916 NAA38Q9BRA0 125 aaKnown RBP5.19□□□□□ -1.58
CPSF1-203ENST00000527916 SPINK7P58062 85 aa5.18□□□□□ -1.58
CPSF1-203ENST00000527916 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
CPSF1-203ENST00000527916 IGKV3D-7A0A0C4DH55 119 aa5.16□□□□□ -1.58
CPSF1-203ENST00000527916 TSTD3H0UI37 97 aa5.16□□□□□ -1.58
CPSF1-203ENST00000527916 C14orf132Q9NPU4 83 aa5.15□□□□□ -1.59
CPSF1-203ENST00000527916 NREPQ16612 68 aa5.14□□□□□ -1.59
CPSF1-203ENST00000527916 Q6ZVQ6 151 aa5.14□□□□□ -1.59
CPSF1-203ENST00000527916 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
CPSF1-203ENST00000527916 H3BT86 120 aa5.11□□□□□ -1.59
CPSF1-203ENST00000527916 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
CPSF1-203ENST00000527916 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
CPSF1-203ENST00000527916 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
CPSF1-203ENST00000527916 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
CPSF1-203ENST00000527916 BATFQ16520 125 aa5.09□□□□□ -1.59
CPSF1-203ENST00000527916 TMEM254Q8TBM7 123 aa5.09□□□□□ -1.59
CPSF1-203ENST00000527916 MRPL34Q9BQ48 92 aaKnown RBP5.09□□□□□ -1.59
CPSF1-203ENST00000527916 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
CPSF1-203ENST00000527916 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
CPSF1-203ENST00000527916 hDV103S1A0JD37 113 aa5.06□□□□□ -1.6
CPSF1-203ENST00000527916 TAX1BP3O14907 124 aa5.06□□□□□ -1.6
CPSF1-203ENST00000527916 K7EQZ3 153 aa5.05□□□□□ -1.6
CPSF1-203ENST00000527916 BPY2O14599 106 aa5.04□□□□□ -1.6
CPSF1-203ENST00000527916 A0A1B0GV90 55 aa5.02□□□□□ -1.61
CPSF1-203ENST00000527916 NDUFS5O43920 106 aa5.01□□□□□ -1.61
CPSF1-203ENST00000527916 H1FX-AS1Q4G0G2 97 aa5.01□□□□□ -1.61
CPSF1-203ENST00000527916 COL5A1-AS1Q5SY13 56 aa4.98□□□□□ -1.61
CPSF1-203ENST00000527916 Q5W150 140 aa4.98□□□□□ -1.61
CPSF1-203ENST00000527916 C7orf65Q6ZTY9 151 aa4.98□□□□□ -1.61
CPSF1-203ENST00000527916 SPCS1Q9Y6A9 102 aa4.98□□□□□ -1.61
CPSF1-203ENST00000527916 SMCPP49901 116 aaPredicted RBP4.97□□□□□ -1.61
CPSF1-203ENST00000527916 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
CPSF1-203ENST00000527916 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
CPSF1-203ENST00000527916 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
CPSF1-203ENST00000527916 HCG22E2RYF7 251 aa4.94□□□□□ -1.62
CPSF1-203ENST00000527916 CXCL6P80162 114 aa4.94□□□□□ -1.62
CPSF1-203ENST00000527916 Q8N9L7 120 aa4.94□□□□□ -1.62
CPSF1-203ENST00000527916 UBL5Q9BZL1 73 aa4.93□□□□□ -1.62
CPSF1-203ENST00000527916 PRO0461Q9UI25 63 aa4.93□□□□□ -1.62
CPSF1-203ENST00000527916 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
CPSF1-203ENST00000527916 A6NN06 94 aa4.91□□□□□ -1.62
CPSF1-203ENST00000527916 K7EP34 96 aa4.89□□□□□ -1.63
CPSF1-203ENST00000527916 C4orf26Q17RF5 130 aa4.89□□□□□ -1.63
CPSF1-203ENST00000527916 KMT2DO14686 5537 aa4.89□□□□□ -1.63
CPSF1-203ENST00000527916 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
CPSF1-203ENST00000527916 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
CPSF1-203ENST00000527916 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
CPSF1-203ENST00000527916 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
CPSF1-203ENST00000527916 F8W1H4 67 aa4.84□□□□□ -1.63
CPSF1-203ENST00000527916 GTF2H5Q6ZYL4 71 aa4.84□□□□□ -1.63
CPSF1-203ENST00000527916 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
CPSF1-203ENST00000527916 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
CPSF1-203ENST00000527916 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
CPSF1-203ENST00000527916 ETDBQ3ZM63 59 aa4.79□□□□□ -1.64
CPSF1-203ENST00000527916 CSAG1Q6PB30 78 aa4.79□□□□□ -1.64
CPSF1-203ENST00000527916 S4R3F8 94 aa4.79□□□□□ -1.64
CPSF1-203ENST00000527916 Q5VV11 94 aa4.77□□□□□ -1.65
CPSF1-203ENST00000527916 LCA10Q71F78 164 aa4.76□□□□□ -1.65
CPSF1-203ENST00000527916 FAM236AA0A1B0GUQ0 79 aa4.74□□□□□ -1.65
CPSF1-203ENST00000527916 FAM236BA0A1B0GV22 79 aa4.74□□□□□ -1.65
CPSF1-203ENST00000527916 ACYP1P07311 99 aa4.74□□□□□ -1.65
CPSF1-203ENST00000527916 MT1BP07438 61 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms