RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 IGHV6-1A0A0B4J1U7 121 aa9.06□□□□□ -0.96
USH1C-207ENST00000527720 FAM229BQ4G0N7 80 aa9.06□□□□□ -0.96
USH1C-207ENST00000527720 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
USH1C-207ENST00000527720 KRTAP10-1P60331 282 aa9.02□□□□□ -0.96
USH1C-207ENST00000527720 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.96
USH1C-207ENST00000527720 PKD1P98161 4303 aa9□□□□□ -0.97
USH1C-207ENST00000527720 PRR4Q16378 134 aa8.97□□□□□ -0.97
USH1C-207ENST00000527720 NDUFS5O43920 106 aa8.97□□□□□ -0.97
USH1C-207ENST00000527720 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.98
USH1C-207ENST00000527720 A0A087X002 238 aa8.95□□□□□ -0.98
USH1C-207ENST00000527720 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
USH1C-207ENST00000527720 BRK1Q8WUW1 75 aa8.95□□□□□ -0.98
USH1C-207ENST00000527720 FAT2Q9NYQ8 4349 aa8.95□□□□□ -0.98
USH1C-207ENST00000527720 C8orf87E5RJ46 101 aa8.94□□□□□ -0.98
USH1C-207ENST00000527720 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
USH1C-207ENST00000527720 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
USH1C-207ENST00000527720 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
USH1C-207ENST00000527720 HYDINQ4G0P3 5121 aa8.93□□□□□ -0.98
USH1C-207ENST00000527720 Q1T7F1 81 aa8.92□□□□□ -0.98
USH1C-207ENST00000527720 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
USH1C-207ENST00000527720 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
USH1C-207ENST00000527720 PCOTHQ58A44 107 aa8.86□□□□□ -0.99
USH1C-207ENST00000527720 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
USH1C-207ENST00000527720 LOC101927531A0A1B0GV80 90 aa8.85□□□□□ -0.99
USH1C-207ENST00000527720 PMAIP1Q13794 54 aa8.85□□□□□ -0.99
USH1C-207ENST00000527720 LINC00313P59037 77 aa8.84□□□□□ -0.99
USH1C-207ENST00000527720 KRTAP13-3Q3SY46 172 aa8.84□□□□□ -0.99
USH1C-207ENST00000527720 VPS13BQ7Z7G8 4022 aa8.82□□□□□ -1
USH1C-207ENST00000527720 Q5W150 140 aa8.8□□□□□ -1
USH1C-207ENST00000527720 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
USH1C-207ENST00000527720 COA5Q86WW8 74 aa8.8□□□□□ -1
USH1C-207ENST00000527720 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
USH1C-207ENST00000527720 C4orf48Q5BLP8 95 aa8.78□□□□□ -1
USH1C-207ENST00000527720 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
USH1C-207ENST00000527720 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
USH1C-207ENST00000527720 SPINK1P00995 79 aa8.77□□□□□ -1.01
USH1C-207ENST00000527720 SACSQ9NZJ4 4579 aa8.73□□□□□ -1.01
USH1C-207ENST00000527720 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
USH1C-207ENST00000527720 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.01
USH1C-207ENST00000527720 PSPHP1O15172 72 aa8.71□□□□□ -1.02
USH1C-207ENST00000527720 HRES1P13985 223 aa8.69□□□□□ -1.02
USH1C-207ENST00000527720 PKHD1P08F94 4074 aa8.68□□□□□ -1.02
USH1C-207ENST00000527720 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
USH1C-207ENST00000527720 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
USH1C-207ENST00000527720 A8MUN3 132 aa8.68□□□□□ -1.02
USH1C-207ENST00000527720 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
USH1C-207ENST00000527720 IGKV2-30P06310 120 aa8.66□□□□□ -1.02
USH1C-207ENST00000527720 Q5VV11 94 aa8.65□□□□□ -1.03
USH1C-207ENST00000527720 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
USH1C-207ENST00000527720 ACYP2P14621 99 aa8.63□□□□□ -1.03
USH1C-207ENST00000527720 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
USH1C-207ENST00000527720 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
USH1C-207ENST00000527720 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
USH1C-207ENST00000527720 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
USH1C-207ENST00000527720 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
USH1C-207ENST00000527720 RETNLBQ9BQ08 111 aa8.6□□□□□ -1.03
USH1C-207ENST00000527720 Q75L30 129 aa8.58□□□□□ -1.04
USH1C-207ENST00000527720 KRTAP10-4P60372 401 aaPredicted RBP8.57□□□□□ -1.04
USH1C-207ENST00000527720 CHKB-CPT1BH3BT56 60 aa8.55□□□□□ -1.04
USH1C-207ENST00000527720 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.04
USH1C-207ENST00000527720 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.04
USH1C-207ENST00000527720 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
USH1C-207ENST00000527720 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
USH1C-207ENST00000527720 RYR2Q92736 4967 aa8.47□□□□□ -1.05
USH1C-207ENST00000527720 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.05
USH1C-207ENST00000527720 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
USH1C-207ENST00000527720 A6NED7 52 aa8.45□□□□□ -1.06
USH1C-207ENST00000527720 FAT1Q14517 4588 aa8.43□□□□□ -1.06
USH1C-207ENST00000527720 C20orf166-AS1Q96NR2 134 aa8.42□□□□□ -1.06
USH1C-207ENST00000527720 A8MUU9 505 aa8.42□□□□□ -1.06
USH1C-207ENST00000527720 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
USH1C-207ENST00000527720 LCA10Q71F78 164 aa8.38□□□□□ -1.07
USH1C-207ENST00000527720 A8MU10 97 aa8.37□□□□□ -1.07
USH1C-207ENST00000527720 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
USH1C-207ENST00000527720 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
USH1C-207ENST00000527720 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.08
USH1C-207ENST00000527720 SPINK7P58062 85 aa8.33□□□□□ -1.08
USH1C-207ENST00000527720 A0A1B0GU69 56 aa8.31□□□□□ -1.08
USH1C-207ENST00000527720 FLG2Q5D862 2391 aaPredicted RBP8.3□□□□□ -1.08
USH1C-207ENST00000527720 H3BS24 57 aa8.28□□□□□ -1.08
USH1C-207ENST00000527720 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
USH1C-207ENST00000527720 Q8N1X5 172 aa8.26□□□□□ -1.09
USH1C-207ENST00000527720 Q5VSD8 79 aa8.26□□□□□ -1.09
USH1C-207ENST00000527720 SPTSSBQ8NFR3 76 aa8.25□□□□□ -1.09
USH1C-207ENST00000527720 A6NN06 94 aa8.24□□□□□ -1.09
USH1C-207ENST00000527720 TNXBP22105 4242 aa8.2□□□□□ -1.1
USH1C-207ENST00000527720 HSPG2P98160 4391 aa8.18□□□□□ -1.1
USH1C-207ENST00000527720 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
USH1C-207ENST00000527720 UQCR11O14957 56 aa8.16□□□□□ -1.1
USH1C-207ENST00000527720 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
USH1C-207ENST00000527720 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
USH1C-207ENST00000527720 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
USH1C-207ENST00000527720 RYR1P21817 5038 aa8.11□□□□□ -1.11
USH1C-207ENST00000527720 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
USH1C-207ENST00000527720 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
USH1C-207ENST00000527720 RYR3Q15413 4870 aa8.08□□□□□ -1.12
USH1C-207ENST00000527720 RPL37P61927 97 aaKnown RBP8.08□□□□□ -1.12
USH1C-207ENST00000527720 XP32Q5T750 250 aa8.03□□□□□ -1.12
USH1C-207ENST00000527720 KRTAP17-1Q9BYP8 105 aa8.03□□□□□ -1.12
USH1C-207ENST00000527720 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms