RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 C21orf62-AS1Q17RA5 79 aa6.84□□□□□ -1.31
SSSCA1-204ENST00000527413 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
SSSCA1-204ENST00000527413 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
SSSCA1-204ENST00000527413 J3KT08 172 aa6.82□□□□□ -1.32
SSSCA1-204ENST00000527413 M0R143 59 aa6.82□□□□□ -1.32
SSSCA1-204ENST00000527413 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
SSSCA1-204ENST00000527413 Q6ZQT0 140 aa6.81□□□□□ -1.32
SSSCA1-204ENST00000527413 NAA38Q9BRA0 125 aaKnown RBP6.81□□□□□ -1.32
SSSCA1-204ENST00000527413 ATXN8Q156A1 80 aa6.8□□□□□ -1.32
SSSCA1-204ENST00000527413 JMJD7-PLA2G4BH0Y9G9 81 aa6.78□□□□□ -1.32
SSSCA1-204ENST00000527413 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
SSSCA1-204ENST00000527413 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
SSSCA1-204ENST00000527413 NDUFB1O75438 58 aa6.76□□□□□ -1.33
SSSCA1-204ENST00000527413 A0A1B0GW54 56 aa6.75□□□□□ -1.33
SSSCA1-204ENST00000527413 MT2AP02795 61 aa6.75□□□□□ -1.33
SSSCA1-204ENST00000527413 A8MWP4 228 aa6.74□□□□□ -1.33
SSSCA1-204ENST00000527413 SMIM6P0DI80 62 aa6.74□□□□□ -1.33
SSSCA1-204ENST00000527413 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
SSSCA1-204ENST00000527413 PDE6GP18545 87 aa6.73□□□□□ -1.33
SSSCA1-204ENST00000527413 C14orf132Q9NPU4 83 aa6.73□□□□□ -1.33
SSSCA1-204ENST00000527413 C8orf17Q9NRJ1 99 aa6.73□□□□□ -1.33
SSSCA1-204ENST00000527413 SPINK7P58062 85 aa6.72□□□□□ -1.33
SSSCA1-204ENST00000527413 LYRM7Q5U5X0 104 aa6.72□□□□□ -1.33
SSSCA1-204ENST00000527413 MTURNQ8N3F0 131 aa6.71□□□□□ -1.34
SSSCA1-204ENST00000527413 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
SSSCA1-204ENST00000527413 MT1FP04733 61 aa6.7□□□□□ -1.34
SSSCA1-204ENST00000527413 USH2AO75445 5202 aa6.69□□□□□ -1.34
SSSCA1-204ENST00000527413 TSTD3H0UI37 97 aa6.67□□□□□ -1.34
SSSCA1-204ENST00000527413 Q6ZVQ6 151 aa6.67□□□□□ -1.34
SSSCA1-204ENST00000527413 BATFQ16520 125 aa6.66□□□□□ -1.34
SSSCA1-204ENST00000527413 NREPQ16612 68 aa6.66□□□□□ -1.34
SSSCA1-204ENST00000527413 PRR15Q8IV56 129 aa6.66□□□□□ -1.34
SSSCA1-204ENST00000527413 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
SSSCA1-204ENST00000527413 WFDC13Q8IUB5 93 aa6.65□□□□□ -1.34
SSSCA1-204ENST00000527413 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
SSSCA1-204ENST00000527413 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
SSSCA1-204ENST00000527413 H3BT86 120 aa6.62□□□□□ -1.35
SSSCA1-204ENST00000527413 LCE2BO14633 110 aa6.62□□□□□ -1.35
SSSCA1-204ENST00000527413 TMEM254Q8TBM7 123 aa6.62□□□□□ -1.35
SSSCA1-204ENST00000527413 MRPL34Q9BQ48 92 aaKnown RBP6.62□□□□□ -1.35
SSSCA1-204ENST00000527413 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
SSSCA1-204ENST00000527413 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
SSSCA1-204ENST00000527413 K7EQZ3 153 aa6.6□□□□□ -1.35
SSSCA1-204ENST00000527413 A0A1W2PPM0 123 aa6.58□□□□□ -1.36
SSSCA1-204ENST00000527413 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.58□□□□□ -1.36
SSSCA1-204ENST00000527413 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
SSSCA1-204ENST00000527413 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
SSSCA1-204ENST00000527413 NDUFS5O43920 106 aa6.55□□□□□ -1.36
SSSCA1-204ENST00000527413 BPY2O14599 106 aa6.54□□□□□ -1.36
SSSCA1-204ENST00000527413 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
SSSCA1-204ENST00000527413 LOC105371267A0A1B0GV96 52 aa6.52□□□□□ -1.37
SSSCA1-204ENST00000527413 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
SSSCA1-204ENST00000527413 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
SSSCA1-204ENST00000527413 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
SSSCA1-204ENST00000527413 IGKV2-30P06310 120 aa6.48□□□□□ -1.37
SSSCA1-204ENST00000527413 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
SSSCA1-204ENST00000527413 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
SSSCA1-204ENST00000527413 Q8N9L7 120 aa6.48□□□□□ -1.37
SSSCA1-204ENST00000527413 SPCS1Q9Y6A9 102 aa6.48□□□□□ -1.37
SSSCA1-204ENST00000527413 Q5W150 140 aa6.47□□□□□ -1.37
SSSCA1-204ENST00000527413 CASC2Q6XLA1 102 aa6.47□□□□□ -1.37
SSSCA1-204ENST00000527413 SMCPP49901 116 aaPredicted RBP6.45□□□□□ -1.38
SSSCA1-204ENST00000527413 HCG22E2RYF7 251 aa6.44□□□□□ -1.38
SSSCA1-204ENST00000527413 CXCL6P80162 114 aa6.4□□□□□ -1.38
SSSCA1-204ENST00000527413 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
SSSCA1-204ENST00000527413 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
SSSCA1-204ENST00000527413 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
SSSCA1-204ENST00000527413 PRO0461Q9UI25 63 aa6.39□□□□□ -1.39
SSSCA1-204ENST00000527413 COL5A1-AS1Q5SY13 56 aa6.38□□□□□ -1.39
SSSCA1-204ENST00000527413 C4orf26Q17RF5 130 aa6.37□□□□□ -1.39
SSSCA1-204ENST00000527413 K7EP34 96 aa6.36□□□□□ -1.39
SSSCA1-204ENST00000527413 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
SSSCA1-204ENST00000527413 C5orf47Q569G3 176 aa6.27□□□□□ -1.41
SSSCA1-204ENST00000527413 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
SSSCA1-204ENST00000527413 GTF2H5Q6ZYL4 71 aa6.26□□□□□ -1.41
SSSCA1-204ENST00000527413 S4R3F8 94 aa6.26□□□□□ -1.41
SSSCA1-204ENST00000527413 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
SSSCA1-204ENST00000527413 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
SSSCA1-204ENST00000527413 C1orf64Q8NEQ6 169 aa6.24□□□□□ -1.41
SSSCA1-204ENST00000527413 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
SSSCA1-204ENST00000527413 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
SSSCA1-204ENST00000527413 F8W1H4 67 aa6.23□□□□□ -1.41
SSSCA1-204ENST00000527413 ETDBQ3ZM63 59 aa6.22□□□□□ -1.41
SSSCA1-204ENST00000527413 LCA10Q71F78 164 aa6.21□□□□□ -1.42
SSSCA1-204ENST00000527413 CSAG1Q6PB30 78 aa6.2□□□□□ -1.42
SSSCA1-204ENST00000527413 PCP4L1A6NKN8 68 aa6.15□□□□□ -1.42
SSSCA1-204ENST00000527413 CYP4F30PQ9H0H9 118 aa6.14□□□□□ -1.43
SSSCA1-204ENST00000527413 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
SSSCA1-204ENST00000527413 MT1BP07438 61 aa6.13□□□□□ -1.43
SSSCA1-204ENST00000527413 SPRR2GQ9BYE4 73 aa6.13□□□□□ -1.43
SSSCA1-204ENST00000527413 KRTAP6-3Q3LI67 103 aa6.12□□□□□ -1.43
SSSCA1-204ENST00000527413 Q5VV11 94 aa6.12□□□□□ -1.43
SSSCA1-204ENST00000527413 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
SSSCA1-204ENST00000527413 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
SSSCA1-204ENST00000527413 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
SSSCA1-204ENST00000527413 ACYP1P07311 99 aa6.09□□□□□ -1.43
SSSCA1-204ENST00000527413 KLKP1Q107X0 134 aa6.09□□□□□ -1.43
SSSCA1-204ENST00000527413 A6NN06 94 aa6.08□□□□□ -1.44
SSSCA1-204ENST00000527413 A0A087WVE0 104 aa6.07□□□□□ -1.44
SSSCA1-204ENST00000527413 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms