RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 ADM2Q7Z4H4 148 aa5.52□□□□□ -1.53
SCN3B-203ENST00000527125 APLNQ9ULZ1 77 aa5.52□□□□□ -1.53
SCN3B-203ENST00000527125 STARD9Q9P2P6 4700 aa5.52□□□□□ -1.53
SCN3B-203ENST00000527125 FBN3Q75N90 2809 aa5.52□□□□□ -1.53
SCN3B-203ENST00000527125 A0A087X002 238 aa5.51□□□□□ -1.53
SCN3B-203ENST00000527125 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
SCN3B-203ENST00000527125 K7EIL1 84 aa5.5□□□□□ -1.53
SCN3B-203ENST00000527125 NDUFS5O43920 106 aa5.5□□□□□ -1.53
SCN3B-203ENST00000527125 SPACA4Q8TDM5 124 aa5.5□□□□□ -1.53
SCN3B-203ENST00000527125 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
SCN3B-203ENST00000527125 SPINK7P58062 85 aa5.5□□□□□ -1.53
SCN3B-203ENST00000527125 MRPL34Q9BQ48 92 aaKnown RBP5.49□□□□□ -1.53
SCN3B-203ENST00000527125 PCOTHQ58A44 107 aa5.48□□□□□ -1.53
SCN3B-203ENST00000527125 Q5W150 140 aa5.47□□□□□ -1.53
SCN3B-203ENST00000527125 C7orf65Q6ZTY9 151 aa5.47□□□□□ -1.53
SCN3B-203ENST00000527125 DNAH11Q96DT5 4516 aa5.47□□□□□ -1.53
SCN3B-203ENST00000527125 FAM229AH3BQW9 127 aa5.46□□□□□ -1.54
SCN3B-203ENST00000527125 SPAG11AQ6PDA7 123 aa5.46□□□□□ -1.54
SCN3B-203ENST00000527125 DNAH5Q8TE73 4624 aa5.46□□□□□ -1.54
SCN3B-203ENST00000527125 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
SCN3B-203ENST00000527125 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
SCN3B-203ENST00000527125 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
SCN3B-203ENST00000527125 LINC00313P59037 77 aa5.44□□□□□ -1.54
SCN3B-203ENST00000527125 DMAC1Q96GE9 116 aa5.42□□□□□ -1.54
SCN3B-203ENST00000527125 IGLV5-52A0A0A0MRZ9 124 aa5.42□□□□□ -1.54
SCN3B-203ENST00000527125 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
SCN3B-203ENST00000527125 IGLV9-49A0A0B4J1Y8 123 aa5.4□□□□□ -1.54
SCN3B-203ENST00000527125 PKD1P98161 4303 aa5.4□□□□□ -1.54
SCN3B-203ENST00000527125 LINC01554Q52M75 96 aa5.4□□□□□ -1.55
SCN3B-203ENST00000527125 NBDYA0A0U1RRE5 68 aa5.4□□□□□ -1.55
SCN3B-203ENST00000527125 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
SCN3B-203ENST00000527125 PSORS1C2Q9UIG4 136 aa5.38□□□□□ -1.55
SCN3B-203ENST00000527125 ZNF861PO60384 105 aa5.37□□□□□ -1.55
SCN3B-203ENST00000527125 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
SCN3B-203ENST00000527125 NBEAL1Q6ZS30 2694 aa5.37□□□□□ -1.55
SCN3B-203ENST00000527125 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
SCN3B-203ENST00000527125 RTL8CO15255 209 aa5.36□□□□□ -1.55
SCN3B-203ENST00000527125 STAB1Q9NY15 2570 aa5.36□□□□□ -1.55
SCN3B-203ENST00000527125 ACYP2P14621 99 aa5.35□□□□□ -1.55
SCN3B-203ENST00000527125 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
SCN3B-203ENST00000527125 SACSQ9NZJ4 4579 aa5.33□□□□□ -1.56
SCN3B-203ENST00000527125 A0A087WTM6 91 aa5.33□□□□□ -1.56
SCN3B-203ENST00000527125 IGKV2-30P06310 120 aa5.33□□□□□ -1.56
SCN3B-203ENST00000527125 FAT2Q9NYQ8 4349 aa5.32□□□□□ -1.56
SCN3B-203ENST00000527125 RETNLBQ9BQ08 111 aa5.31□□□□□ -1.56
SCN3B-203ENST00000527125 NOTCH1P46531 2555 aa5.3□□□□□ -1.56
SCN3B-203ENST00000527125 UBE2DNLQ8IWF7 75 aa5.3□□□□□ -1.56
SCN3B-203ENST00000527125 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
SCN3B-203ENST00000527125 STAB2Q8WWQ8 2551 aa5.29□□□□□ -1.56
SCN3B-203ENST00000527125 FLG2Q5D862 2391 aaPredicted RBP5.28□□□□□ -1.56
SCN3B-203ENST00000527125 IGLV7-43P04211 117 aa5.28□□□□□ -1.56
SCN3B-203ENST00000527125 CDK2AP2O75956 126 aa5.28□□□□□ -1.56
SCN3B-203ENST00000527125 SSBP3-AS1Q7Z2R9 100 aa5.28□□□□□ -1.56
SCN3B-203ENST00000527125 COL6A5A8TX70 2615 aa5.27□□□□□ -1.57
SCN3B-203ENST00000527125 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
SCN3B-203ENST00000527125 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
SCN3B-203ENST00000527125 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
SCN3B-203ENST00000527125 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
SCN3B-203ENST00000527125 DNHD1Q96M86 4753 aa5.24□□□□□ -1.57
SCN3B-203ENST00000527125 NUPR2A6NF83 97 aa5.24□□□□□ -1.57
SCN3B-203ENST00000527125 MEGF8Q7Z7M0 2845 aa5.24□□□□□ -1.57
SCN3B-203ENST00000527125 A0A1B0GU69 56 aa5.21□□□□□ -1.57
SCN3B-203ENST00000527125 C1orf134Q5TEV5 83 aa5.21□□□□□ -1.57
SCN3B-203ENST00000527125 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
SCN3B-203ENST00000527125 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.58
SCN3B-203ENST00000527125 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.58
SCN3B-203ENST00000527125 SPINK6Q6UWN8 80 aa5.2□□□□□ -1.58
SCN3B-203ENST00000527125 KRTAP1-4P0C5Y4 121 aa5.19□□□□□ -1.58
SCN3B-203ENST00000527125 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
SCN3B-203ENST00000527125 CIRBP-AS1Q8TBR5 109 aa5.18□□□□□ -1.58
SCN3B-203ENST00000527125 UQCR11O14957 56 aa5.18□□□□□ -1.58
SCN3B-203ENST00000527125 Q6ZSA8 131 aa5.17□□□□□ -1.58
SCN3B-203ENST00000527125 HYDINQ4G0P3 5121 aa5.17□□□□□ -1.58
SCN3B-203ENST00000527125 PKHD1P08F94 4074 aa5.15□□□□□ -1.58
SCN3B-203ENST00000527125 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
SCN3B-203ENST00000527125 TGP01266 2768 aa5.12□□□□□ -1.59
SCN3B-203ENST00000527125 A8MUU9 505 aa5.1□□□□□ -1.59
SCN3B-203ENST00000527125 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
SCN3B-203ENST00000527125 H0YAA0 97 aa5.09□□□□□ -1.59
SCN3B-203ENST00000527125 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
SCN3B-203ENST00000527125 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
SCN3B-203ENST00000527125 LY6G6CO95867 125 aa5.07□□□□□ -1.6
SCN3B-203ENST00000527125 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
SCN3B-203ENST00000527125 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
SCN3B-203ENST00000527125 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
SCN3B-203ENST00000527125 MGAM2Q2M2H8 2515 aa5.05□□□□□ -1.6
SCN3B-203ENST00000527125 ROMO1P60602 79 aa5.05□□□□□ -1.6
SCN3B-203ENST00000527125 KRTAP10-1P60331 282 aa5.03□□□□□ -1.6
SCN3B-203ENST00000527125 TNXBP22105 4242 aa5.03□□□□□ -1.6
SCN3B-203ENST00000527125 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
SCN3B-203ENST00000527125 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
SCN3B-203ENST00000527125 TYMSOSQ8TAI1 123 aa5.02□□□□□ -1.61
SCN3B-203ENST00000527125 SPINK1P00995 79 aa5.01□□□□□ -1.61
SCN3B-203ENST00000527125 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
SCN3B-203ENST00000527125 HSPG2P98160 4391 aa5□□□□□ -1.61
SCN3B-203ENST00000527125 P0C880 135 aa4.98□□□□□ -1.61
SCN3B-203ENST00000527125 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
SCN3B-203ENST00000527125 Q8N1X5 172 aa4.98□□□□□ -1.61
SCN3B-203ENST00000527125 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
SCN3B-203ENST00000527125 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms