RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CIRBP-AS1Q8TBR5 109 aa11.99□□□□□ -0.49
SMIM3-201ENST00000526627 MRPL34Q9BQ48 92 aaKnown RBP11.98□□□□□ -0.49
SMIM3-201ENST00000526627 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
SMIM3-201ENST00000526627 NDUFS5O43920 106 aa11.94□□□□□ -0.5
SMIM3-201ENST00000526627 BRK1Q8WUW1 75 aa11.94□□□□□ -0.5
SMIM3-201ENST00000526627 CD164Q04900 197 aa11.94□□□□□ -0.5
SMIM3-201ENST00000526627 PCOTHQ58A44 107 aa11.93□□□□□ -0.5
SMIM3-201ENST00000526627 SPINK6Q6UWN8 80 aa11.92□□□□□ -0.5
SMIM3-201ENST00000526627 SSBP3-AS1Q7Z2R9 100 aa11.9□□□□□ -0.5
SMIM3-201ENST00000526627 PSPHP1O15172 72 aa11.88□□□□□ -0.51
SMIM3-201ENST00000526627 Q6ZSA8 131 aa11.87□□□□□ -0.51
SMIM3-201ENST00000526627 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
SMIM3-201ENST00000526627 COA5Q86WW8 74 aa11.85□□□□□ -0.51
SMIM3-201ENST00000526627 SEC61GP60059 68 aa11.84□□□□□ -0.51
SMIM3-201ENST00000526627 PKD1P98161 4303 aa11.83□□□□□ -0.52
SMIM3-201ENST00000526627 KRTAP13-3Q3SY46 172 aa11.83□□□□□ -0.52
SMIM3-201ENST00000526627 KRTAP13-2Q52LG2 175 aa11.83□□□□□ -0.52
SMIM3-201ENST00000526627 Q5W150 140 aa11.83□□□□□ -0.52
SMIM3-201ENST00000526627 Q8N9P0 234 aaPredicted RBP11.83□□□□□ -0.52
SMIM3-201ENST00000526627 V9GYY9 64 aa11.83□□□□□ -0.52
SMIM3-201ENST00000526627 LRP1BQ9NZR2 4599 aa11.82□□□□□ -0.52
SMIM3-201ENST00000526627 A8MUN3 132 aa11.82□□□□□ -0.52
SMIM3-201ENST00000526627 FAT2Q9NYQ8 4349 aa11.81□□□□□ -0.52
SMIM3-201ENST00000526627 HYDINQ4G0P3 5121 aa11.79□□□□□ -0.52
SMIM3-201ENST00000526627 C1orf195Q5TG92 126 aa11.77□□□□□ -0.53
SMIM3-201ENST00000526627 C8orf87E5RJ46 101 aa11.76□□□□□ -0.53
SMIM3-201ENST00000526627 Q5VV11 94 aa11.76□□□□□ -0.53
SMIM3-201ENST00000526627 LOC101927531A0A1B0GV80 90 aa11.74□□□□□ -0.53
SMIM3-201ENST00000526627 LIMD2Q9BT23 127 aa11.74□□□□□ -0.53
SMIM3-201ENST00000526627 KRTAP1-4P0C5Y4 121 aa11.72□□□□□ -0.53
SMIM3-201ENST00000526627 HRES1P13985 223 aa11.7□□□□□ -0.54
SMIM3-201ENST00000526627 LINC00313P59037 77 aa11.69□□□□□ -0.54
SMIM3-201ENST00000526627 PRR15LQ9BU68 103 aa11.66□□□□□ -0.54
SMIM3-201ENST00000526627 VPS13BQ7Z7G8 4022 aa11.64□□□□□ -0.55
SMIM3-201ENST00000526627 KRTAP16-1A8MUX0 517 aa11.61□□□□□ -0.55
SMIM3-201ENST00000526627 A8MU10 97 aa11.59□□□□□ -0.55
SMIM3-201ENST00000526627 CHKB-CPT1BH3BT56 60 aa11.59□□□□□ -0.55
SMIM3-201ENST00000526627 Q75L30 129 aa11.58□□□□□ -0.56
SMIM3-201ENST00000526627 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
SMIM3-201ENST00000526627 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.56
SMIM3-201ENST00000526627 LINC01558Q9Y6Z2 57 aa11.58□□□□□ -0.56
SMIM3-201ENST00000526627 RETNLBQ9BQ08 111 aa11.55□□□□□ -0.56
SMIM3-201ENST00000526627 PLA2G1BP04054 148 aaKnown RBP11.53□□□□□ -0.56
SMIM3-201ENST00000526627 IGKV2-30P06310 120 aa11.52□□□□□ -0.57
SMIM3-201ENST00000526627 TYMSOSQ8TAI1 123 aa11.49□□□□□ -0.57
SMIM3-201ENST00000526627 PRR26Q8N8Z3 221 aa11.49□□□□□ -0.57
SMIM3-201ENST00000526627 DMAC1Q96GE9 116 aa11.48□□□□□ -0.57
SMIM3-201ENST00000526627 ACYP2P14621 99 aa11.47□□□□□ -0.57
SMIM3-201ENST00000526627 C4orf48Q5BLP8 95 aa11.46□□□□□ -0.58
SMIM3-201ENST00000526627 LCA10Q71F78 164 aa11.46□□□□□ -0.58
SMIM3-201ENST00000526627 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
SMIM3-201ENST00000526627 SPINK1P00995 79 aa11.45□□□□□ -0.58
SMIM3-201ENST00000526627 PKHD1P08F94 4074 aa11.44□□□□□ -0.58
SMIM3-201ENST00000526627 KRTAP21-3Q3LHN1 58 aa11.43□□□□□ -0.58
SMIM3-201ENST00000526627 A6NED7 52 aa11.43□□□□□ -0.58
SMIM3-201ENST00000526627 PMAIP1Q13794 54 aa11.38□□□□□ -0.59
SMIM3-201ENST00000526627 DYNC1H1Q14204 4646 aaKnown RBP11.35□□□□□ -0.59
SMIM3-201ENST00000526627 SPINK7P58062 85 aa11.35□□□□□ -0.59
SMIM3-201ENST00000526627 LINC00304Q8N9R0 145 aa11.34□□□□□ -0.59
SMIM3-201ENST00000526627 IGKV2D-30A0A075B6S6 120 aa11.34□□□□□ -0.59
SMIM3-201ENST00000526627 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
SMIM3-201ENST00000526627 RPS29P62273 56 aaKnown RBP11.32□□□□□ -0.6
SMIM3-201ENST00000526627 SMR3BP02814 79 aaPredicted RBP11.3□□□□□ -0.6
SMIM3-201ENST00000526627 ATP11AUNQ6ZP68 121 aa11.28□□□□□ -0.6
SMIM3-201ENST00000526627 A0A1B0GVY2 172 aa11.27□□□□□ -0.61
SMIM3-201ENST00000526627 KRTAP10-4P60372 401 aaPredicted RBP11.25□□□□□ -0.61
SMIM3-201ENST00000526627 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
SMIM3-201ENST00000526627 PKHD1L1Q86WI1 4243 aa11.23□□□□□ -0.61
SMIM3-201ENST00000526627 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
SMIM3-201ENST00000526627 FAT1Q14517 4588 aa11.21□□□□□ -0.61
SMIM3-201ENST00000526627 C7orf65Q6ZTY9 151 aa11.19□□□□□ -0.62
SMIM3-201ENST00000526627 A6NN06 94 aa11.15□□□□□ -0.62
SMIM3-201ENST00000526627 A0A1B0GU69 56 aa11.13□□□□□ -0.63
SMIM3-201ENST00000526627 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
SMIM3-201ENST00000526627 A8MUU9 505 aa11.09□□□□□ -0.63
SMIM3-201ENST00000526627 C20orf166-AS1Q96NR2 134 aa11.09□□□□□ -0.63
SMIM3-201ENST00000526627 Q8N1X5 172 aa11.08□□□□□ -0.64
SMIM3-201ENST00000526627 RYR2Q92736 4967 aa11.04□□□□□ -0.64
SMIM3-201ENST00000526627 KTN1-AS1Q86SY8 53 aa11.03□□□□□ -0.64
SMIM3-201ENST00000526627 SPATA8Q6RVD6 105 aa10.98□□□□□ -0.65
SMIM3-201ENST00000526627 RBM12B-AS1Q9P1G2 102 aa10.94□□□□□ -0.66
SMIM3-201ENST00000526627 KRTAP3-1Q9BYR8 98 aa10.93□□□□□ -0.66
SMIM3-201ENST00000526627 UQCR11O14957 56 aa10.91□□□□□ -0.66
SMIM3-201ENST00000526627 FLG2Q5D862 2391 aaPredicted RBP10.9□□□□□ -0.66
SMIM3-201ENST00000526627 MIR22HGQ0VDD5 57 aa10.9□□□□□ -0.67
SMIM3-201ENST00000526627 KMT2CQ8NEZ4 4911 aaKnown RBP10.88□□□□□ -0.67
SMIM3-201ENST00000526627 TNXBP22105 4242 aa10.82□□□□□ -0.68
SMIM3-201ENST00000526627 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
SMIM3-201ENST00000526627 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
SMIM3-201ENST00000526627 LRP1Q07954 4544 aaKnown RBP10.78□□□□□ -0.68
SMIM3-201ENST00000526627 HSPG2P98160 4391 aa10.75□□□□□ -0.69
SMIM3-201ENST00000526627 COX6B2Q6YFQ2 88 aa10.7□□□□□ -0.7
SMIM3-201ENST00000526627 Q5VSD8 79 aa10.7□□□□□ -0.7
SMIM3-201ENST00000526627 KRTAP17-1Q9BYP8 105 aa10.64□□□□□ -0.71
SMIM3-201ENST00000526627 H0YAA0 97 aa10.63□□□□□ -0.71
SMIM3-201ENST00000526627 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
SMIM3-201ENST00000526627 PRAC1Q96KF2 57 aa10.61□□□□□ -0.71
SMIM3-201ENST00000526627 RPL37P61927 97 aaKnown RBP10.59□□□□□ -0.71
SMIM3-201ENST00000526627 RYR1P21817 5038 aa10.58□□□□□ -0.72
SMIM3-201ENST00000526627 A0A1B0GU33 70 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms