RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ABCA2Q9BZC7 2435 aa1.16□□□□□ -2.22
CSDE1-211ENST00000525970 FREM2Q5SZK8 3169 aa1.16□□□□□ -2.22
CSDE1-211ENST00000525970 DMXL2Q8TDJ6 3036 aa1.15□□□□□ -2.22
CSDE1-211ENST00000525970 A0A0D9SG42 100 aa1.15□□□□□ -2.23
CSDE1-211ENST00000525970 H0YAA0 97 aa1.15□□□□□ -2.23
CSDE1-211ENST00000525970 LAMA3Q16787 3333 aa1.15□□□□□ -2.23
CSDE1-211ENST00000525970 CACNA1HO95180 2353 aa1.14□□□□□ -2.23
CSDE1-211ENST00000525970 A0A087WTM6 91 aa1.14□□□□□ -2.23
CSDE1-211ENST00000525970 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
CSDE1-211ENST00000525970 ZFHX3Q15911 3703 aa1.14□□□□□ -2.23
CSDE1-211ENST00000525970 TACC2O95359 2948 aa1.13□□□□□ -2.23
CSDE1-211ENST00000525970 LRBAP50851 2863 aa1.13□□□□□ -2.23
CSDE1-211ENST00000525970 PRRC2CQ9Y520 2896 aaKnown RBP1.13□□□□□ -2.23
CSDE1-211ENST00000525970 SPTA1P02549 2419 aa1.13□□□□□ -2.23
CSDE1-211ENST00000525970 ACACAQ13085 2346 aa1.12□□□□□ -2.23
CSDE1-211ENST00000525970 C2CD3Q4AC94 2353 aa1.12□□□□□ -2.23
CSDE1-211ENST00000525970 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
CSDE1-211ENST00000525970 SPTAN1Q13813 2472 aaKnown RBP1.12□□□□□ -2.23
CSDE1-211ENST00000525970 CELSR3Q9NYQ7 3312 aa1.12□□□□□ -2.23
CSDE1-211ENST00000525970 NCOR1O75376 2440 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 CHD6Q8TD26 2715 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 AKAP13Q12802 2813 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 COX6B2Q6YFQ2 88 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 SPEGQ15772 3267 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 SPG11Q96JI7 2443 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 CSPG4Q6UVK1 2322 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 VCANP13611 3396 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 USP34Q70CQ2 3546 aa1.11□□□□□ -2.23
CSDE1-211ENST00000525970 MAP1AP78559 2803 aaPredicted RBP1.11□□□□□ -2.23
CSDE1-211ENST00000525970 SMR3AQ99954 134 aa1.1□□□□□ -2.23
CSDE1-211ENST00000525970 HRNRQ86YZ3 2850 aaPredicted RBP1.1□□□□□ -2.23
CSDE1-211ENST00000525970 CREBBPQ92793 2442 aa1.09□□□□□ -2.23
CSDE1-211ENST00000525970 C9orf92A6NGG3 77 aa1.09□□□□□ -2.23
CSDE1-211ENST00000525970 S4R3F8 94 aa1.09□□□□□ -2.23
CSDE1-211ENST00000525970 NBASA2RRP1 2371 aa1.09□□□□□ -2.23
CSDE1-211ENST00000525970 DCHS2Q6V1P9 2916 aa1.09□□□□□ -2.23
CSDE1-211ENST00000525970 ALMS1Q8TCU4 4167 aa1.08□□□□□ -2.24
CSDE1-211ENST00000525970 NCOR2Q9Y618 2525 aa1.08□□□□□ -2.24
CSDE1-211ENST00000525970 CDH23Q9H251 3354 aa1.08□□□□□ -2.24
CSDE1-211ENST00000525970 SPTBN4Q9H254 2564 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 WDFY3Q8IZQ1 3526 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 CSMD1Q96PZ7 3565 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 ADGRG4Q8IZF6 3080 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 BOD1L1Q8NFC6 3051 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 CELSR1Q9NYQ6 3014 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 ITPR1Q14643 2758 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 COL12A1Q99715 3063 aa1.07□□□□□ -2.24
CSDE1-211ENST00000525970 ANKRD11Q6UB99 2663 aaPredicted RBP1.06□□□□□ -2.24
CSDE1-211ENST00000525970 DMXL1Q9Y485 3027 aa1.06□□□□□ -2.24
CSDE1-211ENST00000525970 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
CSDE1-211ENST00000525970 DMDP11532 3685 aa1.06□□□□□ -2.24
CSDE1-211ENST00000525970 GVINP1Q7Z2Y8 2422 aa1.06□□□□□ -2.24
CSDE1-211ENST00000525970 TLN2Q9Y4G6 2542 aa1.06□□□□□ -2.24
CSDE1-211ENST00000525970 ANKRD17O75179 2603 aaKnown RBP1.05□□□□□ -2.24
CSDE1-211ENST00000525970 TENM2Q9NT68 2774 aa1.05□□□□□ -2.24
CSDE1-211ENST00000525970 EYSQ5T1H1 3165 aa1.05□□□□□ -2.24
CSDE1-211ENST00000525970 HIVEP3Q5T1R4 2406 aa1.05□□□□□ -2.24
CSDE1-211ENST00000525970 TLN1Q9Y490 2541 aaKnown RBP1.05□□□□□ -2.24
CSDE1-211ENST00000525970 ZNF469Q96JG9 3925 aaPredicted RBP1.05□□□□□ -2.24
CSDE1-211ENST00000525970 ATMQ13315 3056 aa1.05□□□□□ -2.24
CSDE1-211ENST00000525970 SPTBN5Q9NRC6 3674 aaKnown RBP1.05□□□□□ -2.24
CSDE1-211ENST00000525970 LOC400499M0QZD8 3231 aa1.05□□□□□ -2.24
CSDE1-211ENST00000525970 IGF2RP11717 2491 aa1.05□□□□□ -2.24
CSDE1-211ENST00000525970 JMJD1CQ15652 2540 aa1.05□□□□□ -2.24
CSDE1-211ENST00000525970 SETXQ7Z333 2677 aaKnown RBP1.04□□□□□ -2.24
CSDE1-211ENST00000525970 TEX15Q9BXT5 2789 aa1.04□□□□□ -2.24
CSDE1-211ENST00000525970 CRYBG3Q68DQ2 2970 aa1.04□□□□□ -2.24
CSDE1-211ENST00000525970 USP9XQ93008 2570 aaPredicted RBP1.03□□□□□ -2.24
CSDE1-211ENST00000525970 GCN1Q92616 2671 aaKnown RBP1.03□□□□□ -2.24
CSDE1-211ENST00000525970 CELSR2Q9HCU4 2923 aa1.03□□□□□ -2.24
CSDE1-211ENST00000525970 ZFHX4Q86UP3 3567 aa1.03□□□□□ -2.24
CSDE1-211ENST00000525970 NBEAL2Q6ZNJ1 2754 aa1.03□□□□□ -2.24
CSDE1-211ENST00000525970 F8P00451 2351 aa1.03□□□□□ -2.25
CSDE1-211ENST00000525970 PTPN13Q12923 2485 aa1.03□□□□□ -2.25
CSDE1-211ENST00000525970 UTP20O75691 2785 aaKnown RBP1.02□□□□□ -2.25
CSDE1-211ENST00000525970 SMG1Q96Q15 3661 aaKnown RBP1.02□□□□□ -2.25
CSDE1-211ENST00000525970 M0QZ58 72 aa1.02□□□□□ -2.25
CSDE1-211ENST00000525970 FBN2P35556 2912 aa1.02□□□□□ -2.25
CSDE1-211ENST00000525970 CEP295Q9C0D2 2601 aa1.02□□□□□ -2.25
CSDE1-211ENST00000525970 DOPEY1Q5JWR5 2465 aa1.01□□□□□ -2.25
CSDE1-211ENST00000525970 MYO15AQ9UKN7 3530 aa1.01□□□□□ -2.25
CSDE1-211ENST00000525970 RPS29P62273 56 aaKnown RBP1.01□□□□□ -2.25
CSDE1-211ENST00000525970 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
CSDE1-211ENST00000525970 APCP25054 2843 aa1.01□□□□□ -2.25
CSDE1-211ENST00000525970 CHD8Q9HCK8 2581 aa1.01□□□□□ -2.25
CSDE1-211ENST00000525970 SONP18583 2426 aaKnown RBP1□□□□□ -2.25
CSDE1-211ENST00000525970 MYO9AB2RTY4 2548 aa1□□□□□ -2.25
CSDE1-211ENST00000525970 CCDC168Q8NDH2 2452 aa1□□□□□ -2.25
CSDE1-211ENST00000525970 SPENQ96T58 3664 aaKnown RBP1□□□□□ -2.25
CSDE1-211ENST00000525970 RIF1Q5UIP0 2472 aaKnown RBP0.99□□□□□ -2.25
CSDE1-211ENST00000525970 OTOGQ6ZRI0 2925 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 NF1P21359 2839 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 UNC79Q9P2D8 2635 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 EPG5Q9HCE0 2579 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 MTORP42345 2549 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 LRRK2Q5S007 2527 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 ZFYVE26Q68DK2 2539 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 NAV2Q8IVL1 2488 aa0.99□□□□□ -2.25
CSDE1-211ENST00000525970 PIEZO1Q92508 2521 aa0.98□□□□□ -2.25
CSDE1-211ENST00000525970 CENPEQ02224 2701 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms