RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 LOC110117498A0A087WWA1 95 aa9.57□□□□□ -0.88
TSPAN4-215ENST00000525334 FLGP20930 4061 aaPredicted RBP9.56□□□□□ -0.88
TSPAN4-215ENST00000525334 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
TSPAN4-215ENST00000525334 C9orf118A6NHY6 69 aa9.54□□□□□ -0.88
TSPAN4-215ENST00000525334 C14orf132Q9NPU4 83 aa9.54□□□□□ -0.88
TSPAN4-215ENST00000525334 J3KT08 172 aa9.53□□□□□ -0.88
TSPAN4-215ENST00000525334 TAX1BP3O14907 124 aa9.53□□□□□ -0.88
TSPAN4-215ENST00000525334 PDE6GP18545 87 aa9.53□□□□□ -0.88
TSPAN4-215ENST00000525334 C8orf87E5RJ46 101 aa9.52□□□□□ -0.89
TSPAN4-215ENST00000525334 A0A1B0GW54 56 aa9.51□□□□□ -0.89
TSPAN4-215ENST00000525334 M0R2T5 61 aa9.51□□□□□ -0.89
TSPAN4-215ENST00000525334 CRCT1Q9UGL9 99 aa9.51□□□□□ -0.89
TSPAN4-215ENST00000525334 A0A1W2PPM0 123 aa9.5□□□□□ -0.89
TSPAN4-215ENST00000525334 LORP23490 312 aaPredicted RBP9.5□□□□□ -0.89
TSPAN4-215ENST00000525334 KRTAP10-6P60371 365 aaPredicted RBP9.5□□□□□ -0.89
TSPAN4-215ENST00000525334 FSIP2Q5CZC0 6907 aa9.46□□□□□ -0.89
TSPAN4-215ENST00000525334 H3BT86 120 aa9.46□□□□□ -0.9
TSPAN4-215ENST00000525334 MTURNQ8N3F0 131 aa9.46□□□□□ -0.9
TSPAN4-215ENST00000525334 NDUFB1O75438 58 aa9.44□□□□□ -0.9
TSPAN4-215ENST00000525334 A8MWP4 228 aa9.43□□□□□ -0.9
TSPAN4-215ENST00000525334 IGKV3D-7A0A0C4DH55 119 aa9.4□□□□□ -0.9
TSPAN4-215ENST00000525334 NREPQ16612 68 aa9.39□□□□□ -0.91
TSPAN4-215ENST00000525334 C8orf17Q9NRJ1 99 aa9.39□□□□□ -0.91
TSPAN4-215ENST00000525334 SPCS1Q9Y6A9 102 aa9.38□□□□□ -0.91
TSPAN4-215ENST00000525334 HRES1P13985 223 aa9.36□□□□□ -0.91
TSPAN4-215ENST00000525334 Q8N9P0 234 aaPredicted RBP9.36□□□□□ -0.91
TSPAN4-215ENST00000525334 ZCCHC13Q8WW36 166 aaKnown RBP9.36□□□□□ -0.91
TSPAN4-215ENST00000525334 PRR15Q8IV56 129 aa9.34□□□□□ -0.91
TSPAN4-215ENST00000525334 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
TSPAN4-215ENST00000525334 COL5A1-AS1Q5SY13 56 aa9.32□□□□□ -0.92
TSPAN4-215ENST00000525334 FAM236DA0A1B0GTK5 79 aa9.31□□□□□ -0.92
TSPAN4-215ENST00000525334 FAM236CP0DP71 79 aa9.31□□□□□ -0.92
TSPAN4-215ENST00000525334 Q6ZVQ6 151 aa9.31□□□□□ -0.92
TSPAN4-215ENST00000525334 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
TSPAN4-215ENST00000525334 RBM12B-AS1Q9P1G2 102 aa9.3□□□□□ -0.92
TSPAN4-215ENST00000525334 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
TSPAN4-215ENST00000525334 K7EQZ3 153 aa9.27□□□□□ -0.93
TSPAN4-215ENST00000525334 SPINK7P58062 85 aa9.26□□□□□ -0.93
TSPAN4-215ENST00000525334 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
TSPAN4-215ENST00000525334 K7EP34 96 aa9.23□□□□□ -0.93
TSPAN4-215ENST00000525334 BPY2O14599 106 aa9.23□□□□□ -0.93
TSPAN4-215ENST00000525334 MRPL34Q9BQ48 92 aaKnown RBP9.23□□□□□ -0.93
TSPAN4-215ENST00000525334 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
TSPAN4-215ENST00000525334 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
TSPAN4-215ENST00000525334 KRTAP9-8Q9BYQ0 159 aa9.18□□□□□ -0.94
TSPAN4-215ENST00000525334 Q8N9L7 120 aa9.16□□□□□ -0.94
TSPAN4-215ENST00000525334 PCP4L1A6NKN8 68 aa9.15□□□□□ -0.94
TSPAN4-215ENST00000525334 NDUFS5O43920 106 aa9.15□□□□□ -0.94
TSPAN4-215ENST00000525334 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
TSPAN4-215ENST00000525334 LINC00846Q9NV44 126 aa9.13□□□□□ -0.95
TSPAN4-215ENST00000525334 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
TSPAN4-215ENST00000525334 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
TSPAN4-215ENST00000525334 CASC2Q6XLA1 102 aa9.09□□□□□ -0.95
TSPAN4-215ENST00000525334 MT2AP02795 61 aa9.07□□□□□ -0.96
TSPAN4-215ENST00000525334 F8W1H4 67 aa9.05□□□□□ -0.96
TSPAN4-215ENST00000525334 Q5W150 140 aa9.04□□□□□ -0.96
TSPAN4-215ENST00000525334 HCG22E2RYF7 251 aa9.03□□□□□ -0.96
TSPAN4-215ENST00000525334 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
TSPAN4-215ENST00000525334 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
TSPAN4-215ENST00000525334 ETDBQ3ZM63 59 aa9.01□□□□□ -0.97
TSPAN4-215ENST00000525334 MT1FP04733 61 aa9□□□□□ -0.97
TSPAN4-215ENST00000525334 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
TSPAN4-215ENST00000525334 KRTAP9-7A8MTY7 169 aa8.97□□□□□ -0.97
TSPAN4-215ENST00000525334 CXCL6P80162 114 aa8.96□□□□□ -0.98
TSPAN4-215ENST00000525334 USH2AO75445 5202 aa8.95□□□□□ -0.98
TSPAN4-215ENST00000525334 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
TSPAN4-215ENST00000525334 H1FX-AS1Q4G0G2 97 aa8.92□□□□□ -0.98
TSPAN4-215ENST00000525334 KRTAP9-3Q9BYQ3 159 aa8.89□□□□□ -0.99
TSPAN4-215ENST00000525334 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
TSPAN4-215ENST00000525334 SSPOA2VEC9 5147 aa8.87□□□□□ -0.99
TSPAN4-215ENST00000525334 LCE2BO14633 110 aa8.85□□□□□ -0.99
TSPAN4-215ENST00000525334 C4orf26Q17RF5 130 aa8.84□□□□□ -0.99
TSPAN4-215ENST00000525334 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
TSPAN4-215ENST00000525334 ACYP1P07311 99 aa8.79□□□□□ -1
TSPAN4-215ENST00000525334 FAM240AA0A1B0GVK7 77 aa8.76□□□□□ -1.01
TSPAN4-215ENST00000525334 ATP5EP2Q5VTU8 51 aa8.71□□□□□ -1.02
TSPAN4-215ENST00000525334 KRTAP3-1Q9BYR8 98 aa8.71□□□□□ -1.02
TSPAN4-215ENST00000525334 KRTAP19-1Q8IUB9 90 aa8.69□□□□□ -1.02
TSPAN4-215ENST00000525334 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
TSPAN4-215ENST00000525334 HIST1H4AP62805 103 aaKnown RBP8.66□□□□□ -1.02
TSPAN4-215ENST00000525334 FCGBPQ9Y6R7 5405 aaPredicted RBP8.65□□□□□ -1.02
TSPAN4-215ENST00000525334 A0A1B0GV90 55 aa8.65□□□□□ -1.02
TSPAN4-215ENST00000525334 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
TSPAN4-215ENST00000525334 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
TSPAN4-215ENST00000525334 CYP4F30PQ9H0H9 118 aa8.63□□□□□ -1.03
TSPAN4-215ENST00000525334 S4R3F8 94 aa8.63□□□□□ -1.03
TSPAN4-215ENST00000525334 LOC101927531A0A1B0GV80 90 aa8.59□□□□□ -1.03
TSPAN4-215ENST00000525334 LINC00643Q86TS7 51 aa8.59□□□□□ -1.03
TSPAN4-215ENST00000525334 LCA10Q71F78 164 aa8.58□□□□□ -1.04
TSPAN4-215ENST00000525334 A0A087WVE0 104 aa8.57□□□□□ -1.04
TSPAN4-215ENST00000525334 UQCRQO14949 82 aa8.56□□□□□ -1.04
TSPAN4-215ENST00000525334 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
TSPAN4-215ENST00000525334 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
TSPAN4-215ENST00000525334 H0Y9P7 68 aa8.52□□□□□ -1.05
TSPAN4-215ENST00000525334 ATOX1O00244 68 aa8.5□□□□□ -1.05
TSPAN4-215ENST00000525334 FAM236AA0A1B0GUQ0 79 aa8.49□□□□□ -1.05
TSPAN4-215ENST00000525334 FAM236BA0A1B0GV22 79 aa8.49□□□□□ -1.05
TSPAN4-215ENST00000525334 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
TSPAN4-215ENST00000525334 J3QR89 54 aa8.41□□□□□ -1.06
TSPAN4-215ENST00000525334 OCR1Q9BZK8 76 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms