RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 CASC2Q6XLA1 102 aa4.43□□□□□ -1.7
CASP4-204ENST00000524843 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
CASP4-204ENST00000524843 RPS28P62857 69 aaKnown RBP4.42□□□□□ -1.7
CASP4-204ENST00000524843 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
CASP4-204ENST00000524843 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
CASP4-204ENST00000524843 MP68P56378 58 aa4.41□□□□□ -1.7
CASP4-204ENST00000524843 DEFB116Q30KQ4 102 aa4.41□□□□□ -1.7
CASP4-204ENST00000524843 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
CASP4-204ENST00000524843 LIMD2Q9BT23 127 aa4.41□□□□□ -1.7
CASP4-204ENST00000524843 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
CASP4-204ENST00000524843 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
CASP4-204ENST00000524843 hDV103S1A0JD37 113 aa4.4□□□□□ -1.71
CASP4-204ENST00000524843 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
CASP4-204ENST00000524843 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.71
CASP4-204ENST00000524843 C8orf17Q9NRJ1 99 aa4.4□□□□□ -1.71
CASP4-204ENST00000524843 SNURFQ9Y675 71 aa4.4□□□□□ -1.71
CASP4-204ENST00000524843 DNAH11Q96DT5 4516 aa4.39□□□□□ -1.71
CASP4-204ENST00000524843 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
CASP4-204ENST00000524843 DNAH5Q8TE73 4624 aa4.39□□□□□ -1.71
CASP4-204ENST00000524843 TGP01266 2768 aa4.38□□□□□ -1.71
CASP4-204ENST00000524843 KRTAP1-4P0C5Y4 121 aa4.38□□□□□ -1.71
CASP4-204ENST00000524843 HRCT1Q6UXD1 115 aa4.38□□□□□ -1.71
CASP4-204ENST00000524843 ZCCHC13Q8WW36 166 aaKnown RBP4.38□□□□□ -1.71
CASP4-204ENST00000524843 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
CASP4-204ENST00000524843 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
CASP4-204ENST00000524843 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
CASP4-204ENST00000524843 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
CASP4-204ENST00000524843 FAT2Q9NYQ8 4349 aa4.37□□□□□ -1.71
CASP4-204ENST00000524843 TRAV22A0A0B4J277 110 aa4.36□□□□□ -1.71
CASP4-204ENST00000524843 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
CASP4-204ENST00000524843 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
CASP4-204ENST00000524843 A0A087X002 238 aa4.35□□□□□ -1.71
CASP4-204ENST00000524843 H0Y9P7 68 aa4.35□□□□□ -1.71
CASP4-204ENST00000524843 MRPL34Q9BQ48 92 aaKnown RBP4.35□□□□□ -1.71
CASP4-204ENST00000524843 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
CASP4-204ENST00000524843 IGHV6-1A0A0B4J1U7 121 aa4.34□□□□□ -1.71
CASP4-204ENST00000524843 SPINK1P00995 79 aa4.34□□□□□ -1.71
CASP4-204ENST00000524843 SPAG11AQ6PDA7 123 aa4.34□□□□□ -1.71
CASP4-204ENST00000524843 TYMSOSQ8TAI1 123 aa4.33□□□□□ -1.72
CASP4-204ENST00000524843 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
CASP4-204ENST00000524843 PKD1P98161 4303 aa4.31□□□□□ -1.72
CASP4-204ENST00000524843 LINC00208Q96KT6 92 aa4.31□□□□□ -1.72
CASP4-204ENST00000524843 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
CASP4-204ENST00000524843 SACSQ9NZJ4 4579 aa4.3□□□□□ -1.72
CASP4-204ENST00000524843 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
CASP4-204ENST00000524843 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
CASP4-204ENST00000524843 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
CASP4-204ENST00000524843 NDUFS5O43920 106 aa4.29□□□□□ -1.72
CASP4-204ENST00000524843 C1orf64Q8NEQ6 169 aa4.29□□□□□ -1.72
CASP4-204ENST00000524843 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
CASP4-204ENST00000524843 HYDINQ4G0P3 5121 aa4.28□□□□□ -1.72
CASP4-204ENST00000524843 LOC101927531A0A1B0GV80 90 aa4.28□□□□□ -1.72
CASP4-204ENST00000524843 LINC00313P59037 77 aa4.28□□□□□ -1.72
CASP4-204ENST00000524843 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
CASP4-204ENST00000524843 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
CASP4-204ENST00000524843 Q8N9P0 234 aaPredicted RBP4.26□□□□□ -1.73
CASP4-204ENST00000524843 OXTP01178 125 aa4.25□□□□□ -1.73
CASP4-204ENST00000524843 LRP1BQ9NZR2 4599 aa4.25□□□□□ -1.73
CASP4-204ENST00000524843 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
CASP4-204ENST00000524843 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
CASP4-204ENST00000524843 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
CASP4-204ENST00000524843 NOTCH2NLQ7Z3S9 236 aa4.24□□□□□ -1.73
CASP4-204ENST00000524843 PRR26Q8N8Z3 221 aa4.24□□□□□ -1.73
CASP4-204ENST00000524843 VPS13BQ7Z7G8 4022 aa4.24□□□□□ -1.73
CASP4-204ENST00000524843 IGLV7-46A0A075B6I9 117 aa4.23□□□□□ -1.73
CASP4-204ENST00000524843 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
CASP4-204ENST00000524843 SMR3BP02814 79 aaPredicted RBP4.23□□□□□ -1.73
CASP4-204ENST00000524843 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
CASP4-204ENST00000524843 RYR2Q92736 4967 aa4.21□□□□□ -1.74
CASP4-204ENST00000524843 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
CASP4-204ENST00000524843 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
CASP4-204ENST00000524843 PKHD1P08F94 4074 aa4.19□□□□□ -1.74
CASP4-204ENST00000524843 Q5W150 140 aa4.19□□□□□ -1.74
CASP4-204ENST00000524843 V9GYY9 64 aa4.19□□□□□ -1.74
CASP4-204ENST00000524843 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
CASP4-204ENST00000524843 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
CASP4-204ENST00000524843 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
CASP4-204ENST00000524843 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
CASP4-204ENST00000524843 Q5VSD8 79 aa4.17□□□□□ -1.74
CASP4-204ENST00000524843 PRR4Q16378 134 aa4.16□□□□□ -1.74
CASP4-204ENST00000524843 FP248Q71RG6 208 aaPredicted RBP4.16□□□□□ -1.74
CASP4-204ENST00000524843 Q1T7F1 81 aa4.15□□□□□ -1.75
CASP4-204ENST00000524843 COA5Q86WW8 74 aa4.14□□□□□ -1.75
CASP4-204ENST00000524843 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
CASP4-204ENST00000524843 A8MUU9 505 aa4.13□□□□□ -1.75
CASP4-204ENST00000524843 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
CASP4-204ENST00000524843 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
CASP4-204ENST00000524843 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
CASP4-204ENST00000524843 ACYP2P14621 99 aa4.11□□□□□ -1.75
CASP4-204ENST00000524843 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
CASP4-204ENST00000524843 A8MUN3 132 aa4.1□□□□□ -1.75
CASP4-204ENST00000524843 HRES1P13985 223 aa4.1□□□□□ -1.75
CASP4-204ENST00000524843 Q75L30 129 aa4.1□□□□□ -1.75
CASP4-204ENST00000524843 Q8N1X5 172 aa4.1□□□□□ -1.75
CASP4-204ENST00000524843 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
CASP4-204ENST00000524843 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
CASP4-204ENST00000524843 IGKV2D-30A0A075B6S6 120 aa4.08□□□□□ -1.76
CASP4-204ENST00000524843 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
CASP4-204ENST00000524843 RETNLBQ9BQ08 111 aa4.07□□□□□ -1.76
CASP4-204ENST00000524843 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms