RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 PRO0461Q9UI25 63 aa8.04□□□□□ -1.12
SF3B2-202ENST00000524475 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-202ENST00000524475 DSCR10P59022 87 aa8.03□□□□□ -1.12
SF3B2-202ENST00000524475 LINC00313P59037 77 aa8.03□□□□□ -1.12
SF3B2-202ENST00000524475 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
SF3B2-202ENST00000524475 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
SF3B2-202ENST00000524475 GTF2H5Q6ZYL4 71 aa8.01□□□□□ -1.13
SF3B2-202ENST00000524475 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
SF3B2-202ENST00000524475 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
SF3B2-202ENST00000524475 IGHV6-1A0A0B4J1U7 121 aa7.98□□□□□ -1.13
SF3B2-202ENST00000524475 NDUFB1O75438 58 aa7.97□□□□□ -1.13
SF3B2-202ENST00000524475 NREPQ16612 68 aa7.97□□□□□ -1.13
SF3B2-202ENST00000524475 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
SF3B2-202ENST00000524475 A8MWP4 228 aa7.96□□□□□ -1.14
SF3B2-202ENST00000524475 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
SF3B2-202ENST00000524475 F8W1H4 67 aa7.94□□□□□ -1.14
SF3B2-202ENST00000524475 IGKV3D-7A0A0C4DH55 119 aa7.91□□□□□ -1.14
SF3B2-202ENST00000524475 KRTAP19-2Q3LHN2 52 aa7.91□□□□□ -1.14
SF3B2-202ENST00000524475 PRR15Q8IV56 129 aa7.9□□□□□ -1.14
SF3B2-202ENST00000524475 C8orf17Q9NRJ1 99 aa7.89□□□□□ -1.15
SF3B2-202ENST00000524475 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
SF3B2-202ENST00000524475 Q6ZVQ6 151 aa7.87□□□□□ -1.15
SF3B2-202ENST00000524475 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
SF3B2-202ENST00000524475 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
SF3B2-202ENST00000524475 BPY2O14599 106 aa7.85□□□□□ -1.15
SF3B2-202ENST00000524475 ETDBQ3ZM63 59 aa7.84□□□□□ -1.15
SF3B2-202ENST00000524475 MMP24-AS1A0A0U1RRL7 71 aa7.82□□□□□ -1.16
SF3B2-202ENST00000524475 K7EQZ3 153 aa7.82□□□□□ -1.16
SF3B2-202ENST00000524475 UBL5Q9BZL1 73 aa7.82□□□□□ -1.16
SF3B2-202ENST00000524475 LINC00846Q9NV44 126 aa7.82□□□□□ -1.16
SF3B2-202ENST00000524475 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
SF3B2-202ENST00000524475 A0A1B0GV90 55 aa7.79□□□□□ -1.16
SF3B2-202ENST00000524475 ZCCHC13Q8WW36 166 aaKnown RBP7.79□□□□□ -1.16
SF3B2-202ENST00000524475 hDV103S1A0JD37 113 aa7.77□□□□□ -1.17
SF3B2-202ENST00000524475 MRPL34Q9BQ48 92 aaKnown RBP7.77□□□□□ -1.17
SF3B2-202ENST00000524475 MT1HP80294 61 aa7.76□□□□□ -1.17
SF3B2-202ENST00000524475 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
SF3B2-202ENST00000524475 FAM240AA0A1B0GVK7 77 aa7.71□□□□□ -1.18
SF3B2-202ENST00000524475 ACYP1P07311 99 aa7.71□□□□□ -1.18
SF3B2-202ENST00000524475 CXCL6P80162 114 aa7.71□□□□□ -1.18
SF3B2-202ENST00000524475 Q8N9L7 120 aa7.71□□□□□ -1.18
SF3B2-202ENST00000524475 MPLKIPQ8TAP9 179 aa7.71□□□□□ -1.18
SF3B2-202ENST00000524475 HRES1P13985 223 aa7.7□□□□□ -1.18
SF3B2-202ENST00000524475 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
SF3B2-202ENST00000524475 SPINK7P58062 85 aa7.66□□□□□ -1.18
SF3B2-202ENST00000524475 WFDC13Q8IUB5 93 aa7.66□□□□□ -1.18
SF3B2-202ENST00000524475 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
SF3B2-202ENST00000524475 RBM12B-AS1Q9P1G2 102 aa7.65□□□□□ -1.18
SF3B2-202ENST00000524475 NDUFS5O43920 106 aa7.64□□□□□ -1.19
SF3B2-202ENST00000524475 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
SF3B2-202ENST00000524475 M0R2T5 61 aa7.59□□□□□ -1.19
SF3B2-202ENST00000524475 FAM236DA0A1B0GTK5 79 aa7.58□□□□□ -1.2
SF3B2-202ENST00000524475 FAM236CP0DP71 79 aa7.58□□□□□ -1.2
SF3B2-202ENST00000524475 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
SF3B2-202ENST00000524475 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
SF3B2-202ENST00000524475 Q5W150 140 aa7.58□□□□□ -1.2
SF3B2-202ENST00000524475 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
SF3B2-202ENST00000524475 TP53AIP1Q9HCN2 124 aa7.53□□□□□ -1.2
SF3B2-202ENST00000524475 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
SF3B2-202ENST00000524475 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
SF3B2-202ENST00000524475 J3QR89 54 aa7.49□□□□□ -1.21
SF3B2-202ENST00000524475 IGKV2D-30A0A075B6S6 120 aa7.48□□□□□ -1.21
SF3B2-202ENST00000524475 IGKV2-30P06310 120 aa7.48□□□□□ -1.21
SF3B2-202ENST00000524475 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
SF3B2-202ENST00000524475 K7ERU9 68 aa7.46□□□□□ -1.22
SF3B2-202ENST00000524475 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
SF3B2-202ENST00000524475 H1FX-AS1Q4G0G2 97 aa7.39□□□□□ -1.23
SF3B2-202ENST00000524475 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
SF3B2-202ENST00000524475 TRAV22A0A0B4J277 110 aa7.37□□□□□ -1.23
SF3B2-202ENST00000524475 A0A087WVE0 104 aa7.36□□□□□ -1.23
SF3B2-202ENST00000524475 UQCRQO14949 82 aa7.35□□□□□ -1.23
SF3B2-202ENST00000524475 LOC101927531A0A1B0GV80 90 aa7.33□□□□□ -1.24
SF3B2-202ENST00000524475 C4orf26Q17RF5 130 aa7.33□□□□□ -1.24
SF3B2-202ENST00000524475 ATOX1O00244 68 aa7.31□□□□□ -1.24
SF3B2-202ENST00000524475 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
SF3B2-202ENST00000524475 MT2AP02795 61 aa7.29□□□□□ -1.24
SF3B2-202ENST00000524475 H0Y9P7 68 aa7.26□□□□□ -1.25
SF3B2-202ENST00000524475 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
SF3B2-202ENST00000524475 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
SF3B2-202ENST00000524475 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
SF3B2-202ENST00000524475 IMUPQ9GZP8 106 aa7.25□□□□□ -1.25
SF3B2-202ENST00000524475 MT1FP04733 61 aa7.23□□□□□ -1.25
SF3B2-202ENST00000524475 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
SF3B2-202ENST00000524475 MP68P56378 58 aa7.18□□□□□ -1.26
SF3B2-202ENST00000524475 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
SF3B2-202ENST00000524475 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
SF3B2-202ENST00000524475 S4R3F8 94 aa7.17□□□□□ -1.26
SF3B2-202ENST00000524475 FSIP2Q5CZC0 6907 aa7.16□□□□□ -1.26
SF3B2-202ENST00000524475 H3BPC8 53 aa7.16□□□□□ -1.26
SF3B2-202ENST00000524475 MT-ATP8P03928 68 aa7.16□□□□□ -1.26
SF3B2-202ENST00000524475 LINC00208Q96KT6 92 aa7.16□□□□□ -1.26
SF3B2-202ENST00000524475 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
SF3B2-202ENST00000524475 USH2AO75445 5202 aa7.14□□□□□ -1.27
SF3B2-202ENST00000524475 SCGB1A1P11684 91 aa7.14□□□□□ -1.27
SF3B2-202ENST00000524475 CRCT1Q9UGL9 99 aa7.14□□□□□ -1.27
SF3B2-202ENST00000524475 LCA10Q71F78 164 aa7.12□□□□□ -1.27
SF3B2-202ENST00000524475 A8MUN3 132 aa7.1□□□□□ -1.27
SF3B2-202ENST00000524475 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
SF3B2-202ENST00000524475 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
SF3B2-202ENST00000524475 SMIM20Q8N5G0 67 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms